RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 EFCAB10A6NFE3 127 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 RIIAD1A6NNX1 92 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 EFCAB9A8MZ26 197 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 SLC16A6O15403 523 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 OR2T1O43869 369 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 FADS2O95864 444 aaKnown RBP6.66□□□□□ -1.34
LSM8-204ENST00000424702 CBX7O95931 251 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 CCDC159P0C7I6 412 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 HK1P19367 917 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 PTNP21246 168 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 HOXC12P31275 282 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 OR1Q1Q15612 314 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 OR1C1Q15619 314 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 NADK2Q4G0N4 442 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 PPP1R32Q7Z5V6 425 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 GPR32P1Q8NGA4 272 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 BRIX1Q8TDN6 353 aaKnown RBP6.66□□□□□ -1.34
LSM8-204ENST00000424702 RFKQ969G6 155 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 FAM46AQ96IP4 442 aaKnown RBP6.66□□□□□ -1.34
LSM8-204ENST00000424702 PIGQQ9BRB3 760 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 ANKRD19PQ9H560 264 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 EXOSC4Q9NPD3 245 aaKnown RBP6.66□□□□□ -1.34
LSM8-204ENST00000424702 PAQR5Q9NXK6 330 aaPredicted RBP6.66□□□□□ -1.34
LSM8-204ENST00000424702 ALKBH4Q9NXW9 302 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 MYOTQ9UBF9 498 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 RPL36Q9Y3U8 105 aaKnown RBP6.66□□□□□ -1.34
LSM8-204ENST00000424702 PCDHGA10Q9Y5H3 936 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 CEP192Q8TEP8 1941 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 NINQ8N4C6 2090 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 RP1L1Q8IWN7 2480 aaPredicted RBP6.66□□□□□ -1.34
LSM8-204ENST00000424702 IGHV1-45A0A0A0MS14 117 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 VGLL3A8MV65 326 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 SLC1A7O00341 560 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 EFSO43281 561 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 GASTP01350 101 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 ZNF24P17028 368 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 POU3F2P20265 443 aaPredicted RBP6.66□□□□□ -1.34
LSM8-204ENST00000424702 GGT2P36268 569 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 GPR4P46093 362 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 MAN2A2P49641 1150 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 CTBP2P56545 445 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.66□□□□□ -1.34
LSM8-204ENST00000424702 EBPQ15125 230 aaKnown RBP6.66□□□□□ -1.34
LSM8-204ENST00000424702 WBP2NLQ6ICG8 309 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 NANOGNBQ7Z5D8 188 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 CLIP4Q8N3C7 705 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 TCEANCQ8N8B7 351 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 ATP6V1C2Q8NEY4 427 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 TMEM239Q8WW34 195 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 KLHL1Q9NR64 748 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 RSL24D1Q9UHA3 163 aaKnown RBP6.66□□□□□ -1.34
LSM8-204ENST00000424702 ACAD8Q9UKU7 415 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 ZNF318Q5VUA4 2279 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 LOC102723996A0A087X1L8 192 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 TEX51A0A1B0GUA7 166 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 SH3PXD2BA1X283 911 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 UNC119BA6NIH7 251 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 XKRYO14609 159 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 TLX2O43763 284 aaPredicted RBP6.66□□□□□ -1.34
LSM8-204ENST00000424702 XPNPEP2O43895 674 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 CDC40O60508 579 aaKnown RBP eCLIP6.66□□□□□ -1.34
LSM8-204ENST00000424702 HCN1O60741 890 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 TRIM3O75382 744 aaPredicted RBP6.66□□□□□ -1.34
LSM8-204ENST00000424702 MAP2K6P52564 334 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 NUDT6P53370 316 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 CDK5R2Q13319 367 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 PTGES3Q15185 160 aaKnown RBP6.66□□□□□ -1.34
LSM8-204ENST00000424702 KLHL12Q53G59 568 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 ZNF766Q5HY98 468 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 GPR107Q5VW38 600 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 RPL13AP3Q6NVV1 102 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 DNM1P34Q6PK57 102 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 SMARCD3Q6STE5 483 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 BCORP1Q8N888 145 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 CHDHQ8NE62 594 aaPredicted RBP6.66□□□□□ -1.34
LSM8-204ENST00000424702 OR8J1Q8NGP2 316 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 SLC7A13Q8TCU3 470 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 SLC35B4Q969S0 331 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 NXF5Q9H1B4 397 aaKnown RBP6.66□□□□□ -1.34
LSM8-204ENST00000424702 KCNN2Q9H2S1 579 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 CXorf56Q9H5V9 222 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 POLR1DQ9Y2S0 133 aa6.66□□□□□ -1.34
LSM8-204ENST00000424702 SPTBN2O15020 2390 aa6.65□□□□□ -1.34
LSM8-204ENST00000424702 KIAA0513O60268 411 aa6.65□□□□□ -1.34
LSM8-204ENST00000424702 OR2J2O76002 312 aa6.65□□□□□ -1.34
LSM8-204ENST00000424702 FCGR2AP12318 317 aa6.65□□□□□ -1.34
LSM8-204ENST00000424702 DPP4P27487 766 aa6.65□□□□□ -1.34
LSM8-204ENST00000424702 PIGAP37287 484 aa6.65□□□□□ -1.34
LSM8-204ENST00000424702 CAPZA2P47755 286 aa6.65□□□□□ -1.34
LSM8-204ENST00000424702 SERPINB10P48595 397 aa6.65□□□□□ -1.34
LSM8-204ENST00000424702 MLF1P58340 268 aa6.65□□□□□ -1.34
LSM8-204ENST00000424702 GABARAPL2P60520 117 aa6.65□□□□□ -1.34
LSM8-204ENST00000424702 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.65□□□□□ -1.34
LSM8-204ENST00000424702 ANKRD34AQ69YU3 496 aa6.65□□□□□ -1.34
LSM8-204ENST00000424702 ULK3Q6PHR2 472 aa6.65□□□□□ -1.34
LSM8-204ENST00000424702 ST8SIA1Q92185 356 aa6.65□□□□□ -1.34
LSM8-204ENST00000424702 BARD1Q99728 777 aaKnown RBP6.65□□□□□ -1.34
LSM8-204ENST00000424702 NIPSNAP1Q9BPW8 284 aa6.65□□□□□ -1.34
LSM8-204ENST00000424702 PRR14Q9BWN1 585 aa6.65□□□□□ -1.34
LSM8-204ENST00000424702 GPR55Q9Y2T6 319 aaPredicted RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms