RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 DUSP22Q9NRW4 184 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 GPATCH2Q9NW75 528 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 KLHL9Q9P2J3 617 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 ATP6V1HQ9UI12 483 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 DTNAQ9Y4J8 743 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 ACTL7BQ9Y614 415 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 GPC6Q9Y625 555 aaPredicted RBP7.14□□□□□ -1.27
VIM-202ENST00000421459 SONP18583 2426 aaKnown RBP7.13□□□□□ -1.27
VIM-202ENST00000421459 CHD3Q12873 2000 aaKnown RBP7.13□□□□□ -1.27
VIM-202ENST00000421459 OR5H1A6NKK0 313 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 CCT8L1PA6NM43 557 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 GJE1A6NN92 205 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 M0R1B8 84 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 SCAMP2O15127 329 aaKnown RBP7.13□□□□□ -1.27
VIM-202ENST00000421459 FCMRO60667 390 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 SLU7O95391 586 aaKnown RBP7.13□□□□□ -1.27
VIM-202ENST00000421459 PGM3O95394 542 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 C1QCP02747 245 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 FAM157CP0CG43 387 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 IGHV4-31P0DP07 118 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 ZNF16P17020 682 aaPredicted RBP7.13□□□□□ -1.27
VIM-202ENST00000421459 CCNA2P20248 432 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 COX5AP20674 150 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 LCN1P31025 176 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 TTKP33981 857 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 CRHR1P34998 444 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 DIO1P49895 249 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 FABP6P51161 128 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 SESN3P58005 492 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 SELENBP1Q13228 472 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 SKP2Q13309 424 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 PTGR1Q14914 329 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 PCLAFQ15004 111 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 GPR68Q15743 365 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 MAPK14Q16539 360 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 CCDC153Q494R4 210 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 SPDYE7PQ495Y7 208 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 SLC25A53Q5H9E4 307 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 TIMM23BQ5SRD1 257 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 AGAP6Q5VW22 663 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 ZCCHC12Q6PEW1 402 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 SLC22A25Q6T423 547 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 MTERF4Q7Z6M4 381 aaKnown RBP7.13□□□□□ -1.27
VIM-202ENST00000421459 CCDC103Q8IW40 242 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 UBE2J2Q8N2K1 259 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 SLC43A2Q8N370 569 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 ZNF527Q8NB42 609 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 OR52E4Q8NGH9 312 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 TWIST2Q8WVJ9 160 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 MUCL1Q96DR8 90 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 ZNF764Q96H86 408 aaPredicted RBP7.13□□□□□ -1.27
VIM-202ENST00000421459 OR7D2Q96RA2 312 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 STACQ99469 402 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 SDF2Q99470 211 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 RHOXF2Q9BQY4 288 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 MECRQ9BV79 373 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 BEX2Q9BXY8 128 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 ACTRT3Q9BYD9 372 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 BARX1Q9HBU1 254 aaPredicted RBP7.13□□□□□ -1.27
VIM-202ENST00000421459 GP6Q9HCN6 339 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 POU2F3Q9UKI9 436 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 MKLN1Q9UL63 735 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 FAF1Q9UNN5 650 aaPredicted RBP7.13□□□□□ -1.27
VIM-202ENST00000421459 SLC25A15Q9Y619 301 aa7.13□□□□□ -1.27
VIM-202ENST00000421459 CIB4A0PJX0 185 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 SLC35F4A4IF30 521 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 SERINC4A6NH21 518 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 CLDN24A6NM45 220 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 ZNF716A6NP11 495 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 ZNF724A8MTY0 619 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 H3BNH8 94 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 SULT2B1O00204 365 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 COPEO14579 308 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 CFLARO15519 480 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 ZNF264O43296 627 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 UBTFL6P0CB48 400 aaPredicted RBP7.12□□□□□ -1.27
VIM-202ENST00000421459 UBL4AP11441 157 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 DDX5P17844 614 aaKnown RBP7.12□□□□□ -1.27
VIM-202ENST00000421459 KRT4P19013 534 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 CD40P25942 277 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 ALDH3A1P30838 453 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 ARRB2P32121 409 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 SOAT1P35610 550 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 CCT5P48643 541 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 HBA1P69905 142 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 SLC25A3Q00325 362 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 LOXL1Q08397 574 aaPredicted RBP7.12□□□□□ -1.27
VIM-202ENST00000421459 MERTKQ12866 999 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 CBFBQ13951 182 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 MLC1Q15049 377 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 RAB35Q15286 201 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 ARL13AQ5H913 290 aaPredicted RBP7.12□□□□□ -1.27
VIM-202ENST00000421459 IL23RQ5VWK5 629 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 CLEC2AQ6UVW9 174 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 ZCCHC23Q6ZST2 131 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 TMPPEQ6ZT21 453 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 GALNT5Q7Z7M9 940 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 CLECL1Q8IZS7 167 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 FBXL14Q8N1E6 418 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 MUC15Q8N387 334 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms