RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 SOX30O94993 753 aa10.1□□□□□ -0.79
DDX56-203ENST00000421223 RCBTB2O95199 551 aa10.1□□□□□ -0.79
DDX56-203ENST00000421223 CSF2P04141 144 aa10.1□□□□□ -0.79
DDX56-203ENST00000421223 CPEP16870 476 aa10.1□□□□□ -0.79
DDX56-203ENST00000421223 ACVR1BP36896 505 aa10.1□□□□□ -0.79
DDX56-203ENST00000421223 CAPZBP47756 277 aa10.1□□□□□ -0.79
DDX56-203ENST00000421223 TPTEP56180 551 aa10.1□□□□□ -0.79
DDX56-203ENST00000421223 DEFA1P59665 94 aa10.1□□□□□ -0.79
DDX56-203ENST00000421223 DEFA3P59666 94 aa10.1□□□□□ -0.79
DDX56-203ENST00000421223 COPZ1P61923 177 aa10.1□□□□□ -0.79
DDX56-203ENST00000421223 PLAURQ03405 335 aa10.1□□□□□ -0.79
DDX56-203ENST00000421223 PRKCDQ05655 676 aa10.1□□□□□ -0.79
DDX56-203ENST00000421223 PLK5Q496M5 336 aa10.1□□□□□ -0.79
DDX56-203ENST00000421223 MANEAQ5SRI9 462 aa10.1□□□□□ -0.79
DDX56-203ENST00000421223 C19orf48Q6RUI8 117 aa10.1□□□□□ -0.79
DDX56-203ENST00000421223 NPSR1Q6W5P4 371 aa10.1□□□□□ -0.79
DDX56-203ENST00000421223 RPTNQ6XPR3 784 aa10.1□□□□□ -0.79
DDX56-203ENST00000421223 OR52E2Q8NGJ4 325 aa10.1□□□□□ -0.79
DDX56-203ENST00000421223 PHOSPHO1Q8TCT1 267 aa10.1□□□□□ -0.79
DDX56-203ENST00000421223 ZMYND19Q96E35 227 aaPredicted RBP10.1□□□□□ -0.79
DDX56-203ENST00000421223 OR10A5Q9H207 317 aa10.1□□□□□ -0.79
DDX56-203ENST00000421223 UBE2ZQ9H832 354 aaPredicted RBP10.1□□□□□ -0.79
DDX56-203ENST00000421223 SP140LQ9H930 580 aa10.1□□□□□ -0.79
DDX56-203ENST00000421223 A0A1B0GVC2 190 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 FABP12A6NFH5 140 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 A6NIN4 97 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 ZNF217O75362 1048 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 OR2B3O76000 313 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 NKX2-2O95096 273 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 S1PR1P21453 382 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 CD1CP29017 333 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 NAA10P41227 235 aaPredicted RBP10.09□□□□□ -0.79
DDX56-203ENST00000421223 ZNF181Q2M3W8 571 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 PYDC2Q56P42 97 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 NXNL2Q5VZ03 156 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 KIRREL2Q6UWL6 708 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 NCCRP1Q6ZVX7 275 aaPredicted RBP10.09□□□□□ -0.79
DDX56-203ENST00000421223 SIX5Q8N196 739 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 ACBD7Q8N6N7 88 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 CELF2-AS1Q8N7Q2 184 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 NEIL3Q8TAT5 605 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 CTHRC1Q96CG8 243 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 TCTN2Q96GX1 697 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 ORAI3Q9BRQ5 295 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 FGF20Q9NP95 211 aaPredicted RBP10.09□□□□□ -0.79
DDX56-203ENST00000421223 KLHL1Q9NR64 748 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 CLEC4AQ9UMR7 237 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 SATB2Q9UPW6 733 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 RBMX2Q9Y388 322 aaKnown RBP10.09□□□□□ -0.79
DDX56-203ENST00000421223 ADAM18Q9Y3Q7 739 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 TMEM150CB9EJG8 249 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 BLOC1S5-TXNDC5H3BN57 136 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 PSMD9O00233 223 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 SRPX2O60687 465 aaPredicted RBP10.09□□□□□ -0.79
DDX56-203ENST00000421223 NGFRP08138 427 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 MSL3P1P0C860 447 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 CD27P26842 260 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 HTR1FP30939 366 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 SKP1P63208 163 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 FAM27D1Q5T7N8 215 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 FGF11Q92914 225 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 PTP4A1Q93096 173 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 TSLPQ969D9 159 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 ZNF559Q9BR84 538 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 ARHGAP9Q9BRR9 750 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 ALG8Q9BVK2 526 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 CCDC86Q9H6F5 360 aaKnown RBP10.09□□□□□ -0.79
DDX56-203ENST00000421223 SLC2A4RGQ9NR83 387 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 CMAHPQ9Y471 501 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 TMEM129A0AVI4 362 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 IRGMA1A4Y4 181 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 C17orf51A8MQB3 221 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 METTL12A8MUP2 240 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 CHURC1-FNTBB4DL54 471 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 GTPBP1O00178 669 aaKnown RBP10.09□□□□□ -0.79
DDX56-203ENST00000421223 IMPA2O14732 288 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 KHNYNO15037 678 aaKnown RBP10.09□□□□□ -0.79
DDX56-203ENST00000421223 KLF4O43474 513 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 AKAP8O43823 692 aaKnown RBP10.09□□□□□ -0.79
DDX56-203ENST00000421223 NUDT14O95848 222 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 GRPRP30550 384 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 FNTBP49356 437 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 BAK1Q16611 211 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 PRTGQ2VWP7 1150 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 VWA2Q5GFL6 755 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 MEPCEQ7L2J0 689 aaKnown RBP10.09□□□□□ -0.79
DDX56-203ENST00000421223 GDPD3Q7L5L3 318 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 CCDC190Q86UF4 302 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 ASB15Q8WXK1 588 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 SENP5Q96HI0 755 aaPredicted RBP10.09□□□□□ -0.79
DDX56-203ENST00000421223 KATNB1Q9BVA0 655 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 CPNE5Q9HCH3 593 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 ZNF223Q9UK11 482 aaPredicted RBP10.09□□□□□ -0.79
DDX56-203ENST00000421223 PLCL2Q9UPR0 1127 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 SIGLEC7Q9Y286 467 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 IER3IP1Q9Y5U9 82 aa10.09□□□□□ -0.79
DDX56-203ENST00000421223 ASCC3Q8N3C0 2202 aaKnown RBP10.09□□□□□ -0.79
DDX56-203ENST00000421223 NME1P15531 152 aaKnown RBP10.08□□□□□ -0.8
DDX56-203ENST00000421223 SLC25A30Q5SVS4 291 aa10.08□□□□□ -0.8
DDX56-203ENST00000421223 ZCCHC12Q6PEW1 402 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms