RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 PCDHGB6Q9Y5F9 930 aa13.4□□□□□ -0.26
HLA-DPA1-242ENST00000419277 EML5Q05BV3 1969 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 NPIPA5A0A0B4J1W7 369 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 C2orf92A0A1B0GVN3 265 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 NPIPA7E9PJI5 369 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 CH25HO95992 272 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 HNRNPCP07910 306 aaKnown RBP eCLIP13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 NPIPA8P0DM63 369 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 APEHP13798 732 aaKnown RBP13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 HPGDP15428 266 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 PTBP1P26599 531 aaKnown RBP eCLIP13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 CXCL12P48061 93 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 LGALS3BPQ08380 585 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 KLHL26Q53HC5 615 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 DDI2Q5TDH0 399 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 WBP2NLQ6ICG8 309 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 ZNF322Q6U7Q0 402 aaPredicted RBP13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 BTLAQ7Z6A9 289 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 ZAR1Q86SH2 424 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 LYSMD2Q8IV50 215 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 RNF217Q8TC41 542 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 HAVCR2Q8TDQ0 301 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 LIPHQ8WWY8 451 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 TM9SF4Q92544 642 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 RBCK1Q9BYM8 510 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 FOXQ1Q9C009 403 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 FLRT3Q9NZU0 649 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 RNF215Q9Y6U7 377 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 SCDO00767 359 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 ARPC3O15145 178 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 IGKV1D-16P01601 117 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 MAOAP21397 527 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 F8A1P23610 371 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 NOS3P29474 1203 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 RPS19P39019 145 aaKnown RBP13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 PGDP52209 483 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 SLC37A1P57057 533 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 ACTA2P62736 377 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 ACTG2P63267 376 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 MAT1AQ00266 395 aaKnown RBP13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 SQSTM1Q13501 440 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 IL10RAQ13651 578 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 GALEQ14376 348 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 GGTLC2Q14390 218 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 SLC35D3Q5M8T2 416 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 AGAP7PQ5VUJ5 663 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 PLBD1Q6P4A8 553 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 SIX5Q8N196 739 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 GRHL3Q8TE85 626 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 SGTBQ96EQ0 304 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 LCORQ96JN0 433 aaPredicted RBP13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 PTCHD1Q96NR3 888 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 DPYSL5Q9BPU6 564 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 ZNF649Q9BS31 505 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 TBC1D17Q9HA65 648 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 SLC6A5Q9Y345 797 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 ZNF337Q9Y3M9 751 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 NOX1Q9Y5S8 564 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 CLCA3PQ9Y6N3 262 aa13.39□□□□□ -0.27
HLA-DPA1-242ENST00000419277 A0A1B0GX78 115 aa13.38□□□□□ -0.27
HLA-DPA1-242ENST00000419277 A0A1W2PQD3 144 aa13.38□□□□□ -0.27
HLA-DPA1-242ENST00000419277 TCRBV16S1A1N1A0A5B0 115 aa13.38□□□□□ -0.27
HLA-DPA1-242ENST00000419277 TO15178 435 aa13.38□□□□□ -0.27
HLA-DPA1-242ENST00000419277 YKT6O15498 198 aa13.38□□□□□ -0.27
HLA-DPA1-242ENST00000419277 CDC123O75794 336 aaPredicted RBP13.38□□□□□ -0.27
HLA-DPA1-242ENST00000419277 APOA1P02647 267 aa13.38□□□□□ -0.27
HLA-DPA1-242ENST00000419277 MT-ND5P03915 603 aa13.38□□□□□ -0.27
HLA-DPA1-242ENST00000419277 IGKV3-11P04433 115 aa13.38□□□□□ -0.27
HLA-DPA1-242ENST00000419277 RFX3P48380 749 aa13.38□□□□□ -0.27
HLA-DPA1-242ENST00000419277 SOWAHCQ53LP3 525 aaPredicted RBP13.38□□□□□ -0.27
HLA-DPA1-242ENST00000419277 FNDC7Q5VTL7 733 aa13.38□□□□□ -0.27
HLA-DPA1-242ENST00000419277 PAQR6Q6TCH4 344 aa13.38□□□□□ -0.27
HLA-DPA1-242ENST00000419277 DPY19L2P2Q6ZN68 376 aa13.38□□□□□ -0.27
HLA-DPA1-242ENST00000419277 OR13C2Q8NGS9 318 aa13.38□□□□□ -0.27
HLA-DPA1-242ENST00000419277 C1GALT1C1Q96EU7 318 aa13.38□□□□□ -0.27
HLA-DPA1-242ENST00000419277 SENP5Q96HI0 755 aaPredicted RBP13.38□□□□□ -0.27
HLA-DPA1-242ENST00000419277 ZNF768Q9H5H4 540 aaKnown RBP13.38□□□□□ -0.27
HLA-DPA1-242ENST00000419277 ATP13A2Q9NQ11 1180 aa13.38□□□□□ -0.27
HLA-DPA1-242ENST00000419277 COPS7AQ9UBW8 275 aa13.38□□□□□ -0.27
HLA-DPA1-242ENST00000419277 SUSD2Q9UGT4 822 aa13.38□□□□□ -0.27
HLA-DPA1-242ENST00000419277 ADAM30Q9UKF2 790 aa13.38□□□□□ -0.27
HLA-DPA1-242ENST00000419277 CARD8Q9Y2G2 431 aa13.38□□□□□ -0.27
HLA-DPA1-242ENST00000419277 ADAMTS20P59510 1910 aa13.37□□□□□ -0.27
HLA-DPA1-242ENST00000419277 SPTBN5Q9NRC6 3674 aaKnown RBP13.37□□□□□ -0.27
HLA-DPA1-242ENST00000419277 KNL1Q8NG31 2342 aa13.37□□□□□ -0.27
HLA-DPA1-242ENST00000419277 CLPSP04118 112 aa13.37□□□□□ -0.27
HLA-DPA1-242ENST00000419277 CTSBP07858 339 aa13.37□□□□□ -0.27
HLA-DPA1-242ENST00000419277 CYC1P08574 325 aa13.37□□□□□ -0.27
HLA-DPA1-242ENST00000419277 ANKRD34CP0C6C1 535 aa13.37□□□□□ -0.27
HLA-DPA1-242ENST00000419277 UBL4AP11441 157 aa13.37□□□□□ -0.27
HLA-DPA1-242ENST00000419277 FBLP22087 321 aaKnown RBP13.37□□□□□ -0.27
HLA-DPA1-242ENST00000419277 SLC2A5P22732 501 aa13.37□□□□□ -0.27
HLA-DPA1-242ENST00000419277 RPS4XP62701 263 aaKnown RBP13.37□□□□□ -0.27
HLA-DPA1-242ENST00000419277 BTG2P78543 158 aa13.37□□□□□ -0.27
HLA-DPA1-242ENST00000419277 HSF2Q03933 536 aa13.37□□□□□ -0.27
HLA-DPA1-242ENST00000419277 CRYZQ08257 329 aaKnown RBP13.37□□□□□ -0.27
HLA-DPA1-242ENST00000419277 CRTC2Q53ET0 693 aaPredicted RBP13.37□□□□□ -0.27
HLA-DPA1-242ENST00000419277 PERM1Q5SV97 790 aa13.37□□□□□ -0.27
HLA-DPA1-242ENST00000419277 OR2G6Q5TZ20 316 aa13.37□□□□□ -0.27
HLA-DPA1-242ENST00000419277 METAP1DQ6UB28 335 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms