RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 ZNF649Q9BS31 505 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 TMEM43Q9BTV4 400 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 OR8D2Q9GZM6 311 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 WWTR1Q9GZV5 400 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 LAT2Q9GZY6 243 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 DCSTAMPQ9H295 470 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 SLC26A1Q9H2B4 701 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 GAREM1Q9H706 876 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 SIAEQ9HAT2 523 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 MCCC2Q9HCC0 563 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 CTSFQ9UBX1 484 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 SEC14L4Q9UDX3 406 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 CLEC2DQ9UHP7 191 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 ATXN7L1Q9ULK2 861 aaPredicted RBP8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 RALGAPA1Q6GYQ0 2036 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 KIF26BQ2KJY2 2108 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 KMT2EQ8IZD2 1858 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 IGKV1D-42A0A075B6H8 117 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 CPED1A4D0V7 1026 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 FAM86C2PA6NEL3 165 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 CCDC182A6NF36 153 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 METTL15A6NJ78 407 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 SAGE2PA6NJ88 616 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 VSTM2BA6NLU5 285 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 ALG1L2C9J202 215 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 NTN3O00634 580 aaPredicted RBP8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 MYL12BO14950 172 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 OIP5O43482 229 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 NADKO95544 446 aaPredicted RBP8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 ZNF883P0CG24 379 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 LIMS3P0CW19 117 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 LIMS4P0CW20 117 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 PNMTP11086 282 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 UBL4AP11441 157 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 CPEP16870 476 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 BMP7P18075 431 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 SLC2A5P22732 501 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 SLC6A6P31641 620 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 ETV5P41161 510 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 SLC6A8P48029 635 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 CLK1P49759 484 aaKnown RBP8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 ETV1P50549 477 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 RNF144AP50876 292 aaPredicted RBP8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 BMXP51813 675 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 PNLIPRP2P54317 469 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 WNT4P56705 351 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 FOXK2Q01167 660 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 TPBGQ13641 420 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 C1DQ13901 141 aaKnown RBP8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 MED22Q15528 200 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 NSDHLQ15738 373 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 CD226Q15762 336 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 ZNF528Q3MIS6 628 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 NKAIN1Q4KMZ8 207 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 C1orf189Q5VU69 101 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 ARHGAP11AQ6P4F7 1023 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 APOOLQ6UXV4 268 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 CXXC5Q7LFL8 322 aaKnown RBP8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 SLC29A4Q7RTT9 530 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 ATG4DQ86TL0 474 aaPredicted RBP8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 MFSD4AQ8N468 514 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 PSD4Q8NDX1 1056 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 NFAM1Q8NET5 270 aaPredicted RBP8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 OR6Q1Q8NGQ2 317 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 OR52N1Q8NH53 320 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 STT3BQ8TCJ2 826 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 RNF138Q8WVD3 245 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 S100ZQ8WXG8 99 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 TP53INP1Q96A56 240 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 EFHD2Q96C19 240 aaPredicted RBP8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 SGTBQ96EQ0 304 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 CCDC74BQ96LY2 380 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 GPX7Q96SL4 187 aaPredicted RBP8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 YIPF2Q9BWQ6 316 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 ENKD1Q9H0I2 346 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 OR51E2Q9H255 320 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 RPS6KB2Q9UBS0 482 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 COPS7AQ9UBW8 275 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 RARRES3Q9UL19 164 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 B3GNT3Q9Y2A9 372 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 GPR52Q9Y2T5 361 aa8.3□□□□□ -1.08
LINCMD1-201ENST00000418518 A8MUA0 341 aa8.29□□□□□ -1.08
LINCMD1-201ENST00000418518 D6RAR5 112 aa8.29□□□□□ -1.08
LINCMD1-201ENST00000418518 KPNA4O00629 521 aaPredicted RBP8.29□□□□□ -1.08
LINCMD1-201ENST00000418518 SCDO00767 359 aa8.29□□□□□ -1.08
LINCMD1-201ENST00000418518 SOCS6O14544 535 aa8.29□□□□□ -1.08
LINCMD1-201ENST00000418518 ADAM10O14672 748 aa8.29□□□□□ -1.08
LINCMD1-201ENST00000418518 ARPC3O15145 178 aa8.29□□□□□ -1.08
LINCMD1-201ENST00000418518 ZNF264O43296 627 aa8.29□□□□□ -1.08
LINCMD1-201ENST00000418518 EIF4E2O60573 245 aaKnown RBP8.29□□□□□ -1.08
LINCMD1-201ENST00000418518 ICOSLGO75144 302 aa8.29□□□□□ -1.08
LINCMD1-201ENST00000418518 GPX5O75715 221 aa8.29□□□□□ -1.08
LINCMD1-201ENST00000418518 NDUFB2O95178 105 aa8.29□□□□□ -1.08
LINCMD1-201ENST00000418518 SLC2A10O95528 541 aa8.29□□□□□ -1.08
LINCMD1-201ENST00000418518 CH25HO95992 272 aa8.29□□□□□ -1.08
LINCMD1-201ENST00000418518 CFIP05156 583 aa8.29□□□□□ -1.08
LINCMD1-201ENST00000418518 TSPAN19P0C672 248 aa8.29□□□□□ -1.08
LINCMD1-201ENST00000418518 GAAP10253 952 aa8.29□□□□□ -1.08
LINCMD1-201ENST00000418518 FGF5P12034 268 aa8.29□□□□□ -1.08
LINCMD1-201ENST00000418518 MYL12AP19105 171 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms