RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 BIRC5O15392 142 aa12.11□□□□□ -0.47
SSB-204ENST00000417292 EFNA2O43921 213 aa12.11□□□□□ -0.47
SSB-204ENST00000417292 PRKD3O94806 890 aa12.11□□□□□ -0.47
SSB-204ENST00000417292 TGFAP01135 160 aa12.11□□□□□ -0.47
SSB-204ENST00000417292 EFNA1P20827 205 aaPredicted RBP12.11□□□□□ -0.47
SSB-204ENST00000417292 ENPP1P22413 925 aa12.11□□□□□ -0.47
SSB-204ENST00000417292 IGHV1-2P23083 117 aa12.11□□□□□ -0.47
SSB-204ENST00000417292 PRPH2P23942 346 aa12.11□□□□□ -0.47
SSB-204ENST00000417292 NR4A2P43354 598 aa12.11□□□□□ -0.47
SSB-204ENST00000417292 OR3A2P47893 321 aa12.11□□□□□ -0.47
SSB-204ENST00000417292 FABP6P51161 128 aa12.11□□□□□ -0.47
SSB-204ENST00000417292 ZNF41P51814 821 aaPredicted RBP12.11□□□□□ -0.47
SSB-204ENST00000417292 NCBP2P52298 156 aaKnown RBP eCLIP12.11□□□□□ -0.47
SSB-204ENST00000417292 PSMD4P55036 377 aaKnown RBP12.11□□□□□ -0.47
SSB-204ENST00000417292 MANFP55145 182 aaKnown RBP12.11□□□□□ -0.47
SSB-204ENST00000417292 WDR4P57081 412 aaKnown RBP12.11□□□□□ -0.47
SSB-204ENST00000417292 ABCE1P61221 599 aaKnown RBP12.11□□□□□ -0.47
SSB-204ENST00000417292 PDCD2Q16342 344 aaPredicted RBP12.11□□□□□ -0.47
SSB-204ENST00000417292 CR1LQ2VPA4 569 aa12.11□□□□□ -0.47
SSB-204ENST00000417292 FAM174BQ3ZCQ3 159 aa12.11□□□□□ -0.47
SSB-204ENST00000417292 ZNF385BQ569K4 471 aa12.11□□□□□ -0.47
SSB-204ENST00000417292 HHATQ5VTY9 493 aa12.11□□□□□ -0.47
SSB-204ENST00000417292 SLC22A25Q6T423 547 aa12.11□□□□□ -0.47
SSB-204ENST00000417292 FCRLAQ7L513 359 aa12.11□□□□□ -0.47
SSB-204ENST00000417292 CROCCP2Q86T23 111 aa12.11□□□□□ -0.47
SSB-204ENST00000417292 DEPDC4Q8N2C3 294 aa12.11□□□□□ -0.47
SSB-204ENST00000417292 OR2L13Q8N349 312 aa12.11□□□□□ -0.47
SSB-204ENST00000417292 FAM76AQ8TAV0 307 aa12.11□□□□□ -0.47
SSB-204ENST00000417292 ACTRT2Q8TDY3 377 aa12.11□□□□□ -0.47
SSB-204ENST00000417292 PIK3R3Q92569 461 aa12.11□□□□□ -0.47
SSB-204ENST00000417292 CPNE4Q96A23 557 aaPredicted RBP12.11□□□□□ -0.47
SSB-204ENST00000417292 CIDECQ96AQ7 238 aaPredicted RBP12.11□□□□□ -0.47
SSB-204ENST00000417292 C3orf49Q96BT1 292 aa12.11□□□□□ -0.47
SSB-204ENST00000417292 SOX7Q9BT81 388 aa12.11□□□□□ -0.47
SSB-204ENST00000417292 LMF2Q9BU23 707 aaKnown RBP12.11□□□□□ -0.47
SSB-204ENST00000417292 CXorf36Q9H7Y0 433 aa12.11□□□□□ -0.47
SSB-204ENST00000417292 MRTO4Q9UKD2 239 aaKnown RBP12.11□□□□□ -0.47
SSB-204ENST00000417292 POU2F3Q9UKI9 436 aa12.11□□□□□ -0.47
SSB-204ENST00000417292 ACTL7BQ9Y614 415 aa12.11□□□□□ -0.47
SSB-204ENST00000417292 OR5H1A6NKK0 313 aa12.1□□□□□ -0.47
SSB-204ENST00000417292 NPIPB8E9PQR5 432 aa12.1□□□□□ -0.47
SSB-204ENST00000417292 PGM3O95394 542 aa12.1□□□□□ -0.47
SSB-204ENST00000417292 OXSR1O95747 527 aaPredicted RBP12.1□□□□□ -0.47
SSB-204ENST00000417292 LINGO3P0C6S8 592 aa12.1□□□□□ -0.47
SSB-204ENST00000417292 BCKDHAP12694 445 aa12.1□□□□□ -0.47
SSB-204ENST00000417292 APEHP13798 732 aaKnown RBP12.1□□□□□ -0.47
SSB-204ENST00000417292 GGT1P19440 569 aa12.1□□□□□ -0.47
SSB-204ENST00000417292 COX5AP20674 150 aa12.1□□□□□ -0.47
SSB-204ENST00000417292 GABRA3P34903 492 aa12.1□□□□□ -0.47
SSB-204ENST00000417292 SERPINB5P36952 375 aa12.1□□□□□ -0.47
SSB-204ENST00000417292 SLC1A6P48664 564 aa12.1□□□□□ -0.47
SSB-204ENST00000417292 STX3Q13277 289 aa12.1□□□□□ -0.47
SSB-204ENST00000417292 XKR7Q5GH72 579 aa12.1□□□□□ -0.47
SSB-204ENST00000417292 RNF165Q6ZSG1 346 aa12.1□□□□□ -0.47
SSB-204ENST00000417292 ZNF551Q7Z340 670 aaPredicted RBP12.1□□□□□ -0.47
SSB-204ENST00000417292 ARL8AQ96BM9 186 aa12.1□□□□□ -0.47
SSB-204ENST00000417292 SH3YL1Q96HL8 342 aaPredicted RBP12.1□□□□□ -0.47
SSB-204ENST00000417292 FCRL1Q96LA6 429 aa12.1□□□□□ -0.47
SSB-204ENST00000417292 SORT1Q99523 831 aa12.1□□□□□ -0.47
SSB-204ENST00000417292 CCT7Q99832 543 aa12.1□□□□□ -0.47
SSB-204ENST00000417292 GLIPR2Q9H4G4 154 aa12.1□□□□□ -0.47
SSB-204ENST00000417292 TIGARQ9NQ88 270 aa12.1□□□□□ -0.47
SSB-204ENST00000417292 DDX18Q9NVP1 670 aaKnown RBP12.1□□□□□ -0.47
SSB-204ENST00000417292 PNPOQ9NVS9 261 aa12.1□□□□□ -0.47
SSB-204ENST00000417292 TRRAPQ9Y4A5 3859 aa12.1□□□□□ -0.47
SSB-204ENST00000417292 IGHV3-15A0A0B4J1V0 119 aa12.09□□□□□ -0.47
SSB-204ENST00000417292 TMEM114B3SHH9 223 aa12.09□□□□□ -0.47
SSB-204ENST00000417292 C9JVG2 144 aa12.09□□□□□ -0.47
SSB-204ENST00000417292 CD40P25942 277 aa12.09□□□□□ -0.47
SSB-204ENST00000417292 GSTM5P46439 218 aa12.09□□□□□ -0.47
SSB-204ENST00000417292 ZNF83P51522 516 aa12.09□□□□□ -0.47
SSB-204ENST00000417292 BST1Q10588 318 aa12.09□□□□□ -0.47
SSB-204ENST00000417292 FOXF1Q12946 379 aa12.09□□□□□ -0.47
SSB-204ENST00000417292 ZNHIT3Q15649 155 aaPredicted RBP12.09□□□□□ -0.47
SSB-204ENST00000417292 C6orf136Q5SQH8 315 aa12.09□□□□□ -0.47
SSB-204ENST00000417292 IL23RQ5VWK5 629 aa12.09□□□□□ -0.47
SSB-204ENST00000417292 TMEM108Q6UXF1 575 aa12.09□□□□□ -0.47
SSB-204ENST00000417292 IKBIPQ70UQ0 350 aa12.09□□□□□ -0.47
SSB-204ENST00000417292 ZAR1Q86SH2 424 aa12.09□□□□□ -0.47
SSB-204ENST00000417292 P2RY8Q86VZ1 359 aa12.09□□□□□ -0.47
SSB-204ENST00000417292 FNDC5Q8NAU1 212 aa12.09□□□□□ -0.47
SSB-204ENST00000417292 ZNF775Q96BV0 537 aaPredicted RBP12.09□□□□□ -0.47
SSB-204ENST00000417292 TLCD1Q96CP7 247 aa12.09□□□□□ -0.47
SSB-204ENST00000417292 TUBGCP3Q96CW5 907 aa12.09□□□□□ -0.47
SSB-204ENST00000417292 ELP4Q96EB1 424 aa12.09□□□□□ -0.47
SSB-204ENST00000417292 METTL2AQ96IZ6 378 aaKnown RBP12.09□□□□□ -0.47
SSB-204ENST00000417292 PPP3R2Q96LZ3 170 aa12.09□□□□□ -0.47
SSB-204ENST00000417292 AMDHD1Q96NU7 426 aa12.09□□□□□ -0.47
SSB-204ENST00000417292 PSD2Q9BQI7 771 aa12.09□□□□□ -0.47
SSB-204ENST00000417292 REEP4Q9H6H4 257 aa12.09□□□□□ -0.47
SSB-204ENST00000417292 COQ10BQ9H8M1 238 aa12.09□□□□□ -0.47
SSB-204ENST00000417292 BCO1Q9HAY6 547 aa12.09□□□□□ -0.47
SSB-204ENST00000417292 TAS2R7Q9NYW3 318 aa12.09□□□□□ -0.47
SSB-204ENST00000417292 SH3BP4Q9P0V3 963 aa12.09□□□□□ -0.47
SSB-204ENST00000417292 MGAT4BQ9UQ53 548 aa12.09□□□□□ -0.47
SSB-204ENST00000417292 KCNH1O95259 989 aa12.08□□□□□ -0.48
SSB-204ENST00000417292 NGFRP08138 427 aa12.08□□□□□ -0.48
SSB-204ENST00000417292 PTAFRP25105 342 aa12.08□□□□□ -0.48
SSB-204ENST00000417292 NTSP30990 170 aa12.08□□□□□ -0.48
SSB-204ENST00000417292 PRIM2P49643 509 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms