RNA–Protein interactions for RNA: ENST00000416671.5

CHEK2-210, Transcript of checkpoint kinase 2, humanhuman

TSL 1 (best)

Gene CHEK2, Length 2,560 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-210ENST00000416671 FAM27D1Q5T7N8 215 aa12.84□□□□□ -0.35
CHEK2-210ENST00000416671 Q6ZTK2 550 aa12.84□□□□□ -0.35
CHEK2-210ENST00000416671 HSD17B13Q7Z5P4 300 aaPredicted RBP12.84□□□□□ -0.35
CHEK2-210ENST00000416671 KRT78Q8N1N4 520 aa12.84□□□□□ -0.35
CHEK2-210ENST00000416671 C7orf57Q8NEG2 295 aa12.84□□□□□ -0.35
CHEK2-210ENST00000416671 SETD7Q8WTS6 366 aaKnown RBP12.84□□□□□ -0.35
CHEK2-210ENST00000416671 PRRC1Q96M27 445 aa12.84□□□□□ -0.35
CHEK2-210ENST00000416671 DDX31Q9H8H2 851 aaKnown RBP12.84□□□□□ -0.35
CHEK2-210ENST00000416671 MGAT4CQ9UBM8 478 aa12.84□□□□□ -0.35
CHEK2-210ENST00000416671 SIRT4Q9Y6E7 314 aaPredicted RBP12.84□□□□□ -0.35
CHEK2-210ENST00000416671 SPEGQ15772 3267 aa12.83□□□□□ -0.35
CHEK2-210ENST00000416671 A0A1W2PPV9 198 aa12.83□□□□□ -0.35
CHEK2-210ENST00000416671 PGRMC2O15173 223 aa12.83□□□□□ -0.35
CHEK2-210ENST00000416671 LCMT2O60294 686 aaKnown RBP12.83□□□□□ -0.35
CHEK2-210ENST00000416671 KLF9Q13886 244 aaPredicted RBP12.83□□□□□ -0.35
CHEK2-210ENST00000416671 MLF2Q15773 248 aaPredicted RBP12.83□□□□□ -0.35
CHEK2-210ENST00000416671 SFRP5Q5T4F7 317 aa12.83□□□□□ -0.35
CHEK2-210ENST00000416671 METTL11BQ5VVY1 283 aa12.83□□□□□ -0.35
CHEK2-210ENST00000416671 FCRL4Q96PJ5 515 aa12.83□□□□□ -0.35
CHEK2-210ENST00000416671 INSM2Q96T92 566 aaPredicted RBP12.83□□□□□ -0.35
CHEK2-210ENST00000416671 TEX12Q9BXU0 123 aa12.83□□□□□ -0.35
CHEK2-210ENST00000416671 NPDC1Q9NQX5 325 aaPredicted RBP12.83□□□□□ -0.35
CHEK2-210ENST00000416671 KLHL1Q9NR64 748 aa12.83□□□□□ -0.35
CHEK2-210ENST00000416671 BABAM2Q9NXR7 383 aa12.83□□□□□ -0.35
CHEK2-210ENST00000416671 H2AFY2Q9P0M6 372 aaPredicted RBP12.83□□□□□ -0.35
CHEK2-210ENST00000416671 FBXL2Q9UKC9 423 aa12.83□□□□□ -0.35
CHEK2-210ENST00000416671 FLVCR2Q9UPI3 526 aa12.83□□□□□ -0.35
CHEK2-210ENST00000416671 OR6C65A6NJZ3 312 aa12.83□□□□□ -0.36
CHEK2-210ENST00000416671 PRR23D1E9PI22 279 aaPredicted RBP12.83□□□□□ -0.36
CHEK2-210ENST00000416671 SURF4O15260 269 aa12.83□□□□□ -0.36
CHEK2-210ENST00000416671 OR1F1O43749 312 aa12.83□□□□□ -0.36
CHEK2-210ENST00000416671 APOC3P02656 99 aa12.83□□□□□ -0.36
CHEK2-210ENST00000416671 PRR23D2P0DMB1 279 aaPredicted RBP12.83□□□□□ -0.36
CHEK2-210ENST00000416671 IGFBP4P22692 258 aa12.83□□□□□ -0.36
CHEK2-210ENST00000416671 HTR1FP30939 366 aa12.83□□□□□ -0.36
CHEK2-210ENST00000416671 PTGER1P34995 402 aa12.83□□□□□ -0.36
CHEK2-210ENST00000416671 IFNGR2P38484 337 aa12.83□□□□□ -0.36
CHEK2-210ENST00000416671 MLLT1Q03111 559 aaPredicted RBP12.83□□□□□ -0.36
CHEK2-210ENST00000416671 HSPB3Q12988 150 aa12.83□□□□□ -0.36
CHEK2-210ENST00000416671 TSPAN31Q12999 210 aa12.83□□□□□ -0.36
CHEK2-210ENST00000416671 SLC25A35Q3KQZ1 300 aa12.83□□□□□ -0.36
CHEK2-210ENST00000416671 KHDRBS2Q5VWX1 349 aaKnown RBP12.83□□□□□ -0.36
CHEK2-210ENST00000416671 SLC30A6Q6NXT4 461 aa12.83□□□□□ -0.36
CHEK2-210ENST00000416671 ATRAIDQ6UW56 229 aa12.83□□□□□ -0.36
CHEK2-210ENST00000416671 OR6T1Q8NGN1 323 aa12.83□□□□□ -0.36
CHEK2-210ENST00000416671 OR51Q1Q8NH59 317 aa12.83□□□□□ -0.36
CHEK2-210ENST00000416671 OR5P2Q8WZ92 322 aa12.83□□□□□ -0.36
CHEK2-210ENST00000416671 ATOH1Q92858 354 aaPredicted RBP12.83□□□□□ -0.36
CHEK2-210ENST00000416671 USB1Q9BQ65 265 aaKnown RBP12.83□□□□□ -0.36
CHEK2-210ENST00000416671 DPH7Q9BTV6 452 aa12.83□□□□□ -0.36
CHEK2-210ENST00000416671 CNIH4Q9P003 139 aa12.83□□□□□ -0.36
CHEK2-210ENST00000416671 CPNE7Q9UBL6 633 aa12.83□□□□□ -0.36
CHEK2-210ENST00000416671 CHST2Q9Y4C5 530 aa12.83□□□□□ -0.36
CHEK2-210ENST00000416671 SNRNP200O75643 2136 aaKnown RBP12.83□□□□□ -0.36
CHEK2-210ENST00000416671 A0A087WUU8 490 aa12.82□□□□□ -0.36
CHEK2-210ENST00000416671 A0A0G2JK05 382 aa12.82□□□□□ -0.36
CHEK2-210ENST00000416671 MCRIP1C9JLW8 97 aa12.82□□□□□ -0.36
CHEK2-210ENST00000416671 TEX46H3BTG2 121 aa12.82□□□□□ -0.36
CHEK2-210ENST00000416671 DNASE2O00115 360 aaPredicted RBP12.82□□□□□ -0.36
CHEK2-210ENST00000416671 RP2O75695 350 aa12.82□□□□□ -0.36
CHEK2-210ENST00000416671 APODP05090 189 aa12.82□□□□□ -0.36
CHEK2-210ENST00000416671 HOXB1P14653 301 aaPredicted RBP12.82□□□□□ -0.36
CHEK2-210ENST00000416671 ATP5A1P25705 553 aaKnown RBP12.82□□□□□ -0.36
CHEK2-210ENST00000416671 TRIM23P36406 574 aa12.82□□□□□ -0.36
CHEK2-210ENST00000416671 MAZP56270 477 aaKnown RBP12.82□□□□□ -0.36
CHEK2-210ENST00000416671 SFRP4Q6FHJ7 346 aaPredicted RBP12.82□□□□□ -0.36
CHEK2-210ENST00000416671 BBS1Q8NFJ9 593 aa12.82□□□□□ -0.36
CHEK2-210ENST00000416671 OR14C36Q8NHC7 312 aa12.82□□□□□ -0.36
CHEK2-210ENST00000416671 CNOT9Q92600 299 aaKnown RBP12.82□□□□□ -0.36
CHEK2-210ENST00000416671 UBE2E3Q969T4 207 aa12.82□□□□□ -0.36
CHEK2-210ENST00000416671 LCORQ96JN0 433 aaPredicted RBP12.82□□□□□ -0.36
CHEK2-210ENST00000416671 JAM3Q9BX67 310 aa12.82□□□□□ -0.36
CHEK2-210ENST00000416671 RSPH9Q9H1X1 276 aaPredicted RBP12.82□□□□□ -0.36
CHEK2-210ENST00000416671 ANXA2P2A6NMY6 339 aa12.82□□□□□ -0.36
CHEK2-210ENST00000416671 ABCD4O14678 606 aa12.82□□□□□ -0.36
CHEK2-210ENST00000416671 GIPP09681 153 aaPredicted RBP12.82□□□□□ -0.36
CHEK2-210ENST00000416671 VEGFCP49767 419 aa12.82□□□□□ -0.36
CHEK2-210ENST00000416671 HTR4Q13639 388 aa12.82□□□□□ -0.36
CHEK2-210ENST00000416671 HLXQ14774 488 aaPredicted RBP12.82□□□□□ -0.36
CHEK2-210ENST00000416671 CEACAM19Q7Z692 300 aa12.82□□□□□ -0.36
CHEK2-210ENST00000416671 SPICQ8N5J4 248 aa12.82□□□□□ -0.36
CHEK2-210ENST00000416671 SIRT6Q8N6T7 355 aa12.82□□□□□ -0.36
CHEK2-210ENST00000416671 OR11G2Q8NGC1 345 aa12.82□□□□□ -0.36
CHEK2-210ENST00000416671 OR5T2Q8NGG2 359 aa12.82□□□□□ -0.36
CHEK2-210ENST00000416671 OR51G2Q8NGK0 314 aa12.82□□□□□ -0.36
CHEK2-210ENST00000416671 THAP4Q8WY91 577 aa12.82□□□□□ -0.36
CHEK2-210ENST00000416671 EXOSC8Q96B26 276 aaKnown RBP12.82□□□□□ -0.36
CHEK2-210ENST00000416671 AIF1LQ9BQI0 150 aa12.82□□□□□ -0.36
CHEK2-210ENST00000416671 TEX101Q9BY14 249 aa12.82□□□□□ -0.36
CHEK2-210ENST00000416671 MS4A8Q9BY19 250 aa12.82□□□□□ -0.36
CHEK2-210ENST00000416671 GSDMCQ9BYG8 508 aa12.82□□□□□ -0.36
CHEK2-210ENST00000416671 OR51I1Q9H343 314 aa12.82□□□□□ -0.36
CHEK2-210ENST00000416671 ZNF304Q9HCX3 659 aa12.82□□□□□ -0.36
CHEK2-210ENST00000416671 LHX9Q9NQ69 397 aa12.82□□□□□ -0.36
CHEK2-210ENST00000416671 TEX10Q9NXF1 929 aaPredicted RBP12.82□□□□□ -0.36
CHEK2-210ENST00000416671 PIPOXQ9P0Z9 390 aa12.82□□□□□ -0.36
CHEK2-210ENST00000416671 P2RX2Q9UBL9 471 aa12.82□□□□□ -0.36
CHEK2-210ENST00000416671 OR5K4A6NMS3 321 aa12.81□□□□□ -0.36
CHEK2-210ENST00000416671 TMPRSS11DO60235 418 aa12.81□□□□□ -0.36
CHEK2-210ENST00000416671 GMDSO60547 372 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms