RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 TFAP2EQ6VUC0 442 aa15.66■□□□□ 0.1
PDLIM2-208ENST00000416159 NUFIP2Q7Z417 695 aaKnown RBP15.66■□□□□ 0.1
PDLIM2-208ENST00000416159 WFDC8Q8IUA0 241 aa15.66■□□□□ 0.1
PDLIM2-208ENST00000416159 NEURL3Q96EH8 262 aa15.66■□□□□ 0.1
PDLIM2-208ENST00000416159 C18orf12Q96KH6 178 aa15.66■□□□□ 0.1
PDLIM2-208ENST00000416159 PAIP2Q9BPZ3 127 aaKnown RBP15.66■□□□□ 0.1
PDLIM2-208ENST00000416159 SAP130Q9H0E3 1048 aa15.66■□□□□ 0.1
PDLIM2-208ENST00000416159 SLC35A3Q9Y2D2 325 aa15.66■□□□□ 0.1
PDLIM2-208ENST00000416159 WDR45Q9Y484 360 aa15.66■□□□□ 0.1
PDLIM2-208ENST00000416159 ZFHX3Q15911 3703 aa15.65■□□□□ 0.1
PDLIM2-208ENST00000416159 MAP1AP78559 2803 aaPredicted RBP15.65■□□□□ 0.1
PDLIM2-208ENST00000416159 A0A1W2PNR3 127 aa15.65■□□□□ 0.1
PDLIM2-208ENST00000416159 E9PBE3 544 aa15.65■□□□□ 0.1
PDLIM2-208ENST00000416159 KIAA0513O60268 411 aa15.65■□□□□ 0.1
PDLIM2-208ENST00000416159 UBTFL6P0CB48 400 aaPredicted RBP15.65■□□□□ 0.1
PDLIM2-208ENST00000416159 ENPP1P22413 925 aa15.65■□□□□ 0.1
PDLIM2-208ENST00000416159 CHI3L1P36222 383 aaPredicted RBP15.65■□□□□ 0.1
PDLIM2-208ENST00000416159 KHKP50053 298 aa15.65■□□□□ 0.1
PDLIM2-208ENST00000416159 SESN3P58005 492 aa15.65■□□□□ 0.1
PDLIM2-208ENST00000416159 TYW3Q6IPR3 259 aaKnown RBP15.65■□□□□ 0.1
PDLIM2-208ENST00000416159 PRSS57Q6UWY2 283 aa15.65■□□□□ 0.1
PDLIM2-208ENST00000416159 OLIG3Q7RTU3 272 aa15.65■□□□□ 0.1
PDLIM2-208ENST00000416159 SPATA19Q7Z5L4 167 aa15.65■□□□□ 0.1
PDLIM2-208ENST00000416159 GABRG1Q8N1C3 465 aa15.65■□□□□ 0.1
PDLIM2-208ENST00000416159 RAB8BQ92930 207 aa15.65■□□□□ 0.1
PDLIM2-208ENST00000416159 ROPN1LQ96C74 230 aa15.65■□□□□ 0.1
PDLIM2-208ENST00000416159 POM121Q96HA1 1249 aa15.65■□□□□ 0.1
PDLIM2-208ENST00000416159 OR5B2Q96R09 309 aa15.65■□□□□ 0.1
PDLIM2-208ENST00000416159 USB1Q9BQ65 265 aaKnown RBP15.65■□□□□ 0.1
PDLIM2-208ENST00000416159 BCO1Q9HAY6 547 aa15.65■□□□□ 0.1
PDLIM2-208ENST00000416159 ACER3Q9NUN7 267 aa15.65■□□□□ 0.1
PDLIM2-208ENST00000416159 KLHL9Q9P2J3 617 aa15.65■□□□□ 0.1
PDLIM2-208ENST00000416159 MARCOQ9UEW3 520 aaPredicted RBP15.65■□□□□ 0.1
PDLIM2-208ENST00000416159 BTNL2Q9UIR0 455 aa15.65■□□□□ 0.1
PDLIM2-208ENST00000416159 RAI1Q7Z5J4 1906 aaPredicted RBP15.64■□□□□ 0.09
PDLIM2-208ENST00000416159 ZNF469Q96JG9 3925 aaPredicted RBP15.64■□□□□ 0.09
PDLIM2-208ENST00000416159 CENPVL1A0A0U1RR11 272 aa15.64■□□□□ 0.09
PDLIM2-208ENST00000416159 GCM2O75603 506 aaPredicted RBP15.64■□□□□ 0.09
PDLIM2-208ENST00000416159 INHBBP09529 407 aa15.64■□□□□ 0.09
PDLIM2-208ENST00000416159 PGM1P36871 562 aa15.64■□□□□ 0.09
PDLIM2-208ENST00000416159 MAPK14Q16539 360 aa15.64■□□□□ 0.09
PDLIM2-208ENST00000416159 FAM174BQ3ZCQ3 159 aa15.64■□□□□ 0.09
PDLIM2-208ENST00000416159 Q5PR19 223 aa15.64■□□□□ 0.09
PDLIM2-208ENST00000416159 SFRP5Q5T4F7 317 aa15.64■□□□□ 0.09
PDLIM2-208ENST00000416159 ZNF704Q6ZNC4 412 aaPredicted RBP15.64■□□□□ 0.09
PDLIM2-208ENST00000416159 PLEKHM3Q6ZWE6 761 aa15.64■□□□□ 0.09
PDLIM2-208ENST00000416159 ZNF619Q8N2I2 560 aa15.64■□□□□ 0.09
PDLIM2-208ENST00000416159 ANKRD42Q8N9B4 389 aa15.64■□□□□ 0.09
PDLIM2-208ENST00000416159 PLPPR2Q96GM1 343 aa15.64■□□□□ 0.09
PDLIM2-208ENST00000416159 CCDC115Q96NT0 180 aa15.64■□□□□ 0.09
PDLIM2-208ENST00000416159 PSD2Q9BQI7 771 aa15.64■□□□□ 0.09
PDLIM2-208ENST00000416159 SLC35A5Q9BS91 424 aa15.64■□□□□ 0.09
PDLIM2-208ENST00000416159 QRSL1Q9H0R6 528 aaKnown RBP15.64■□□□□ 0.09
PDLIM2-208ENST00000416159 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.64■□□□□ 0.09
PDLIM2-208ENST00000416159 AIG1Q9NVV5 245 aa15.64■□□□□ 0.09
PDLIM2-208ENST00000416159 FLNAP21333 2647 aaKnown RBP15.64■□□□□ 0.09
PDLIM2-208ENST00000416159 IGHV3-15A0A0B4J1V0 119 aa15.63■□□□□ 0.09
PDLIM2-208ENST00000416159 SDHDO14521 159 aa15.63■□□□□ 0.09
PDLIM2-208ENST00000416159 CYTIPO60759 359 aa15.63■□□□□ 0.09
PDLIM2-208ENST00000416159 TMCC2O75069 709 aa15.63■□□□□ 0.09
PDLIM2-208ENST00000416159 H6PDO95479 791 aa15.63■□□□□ 0.09
PDLIM2-208ENST00000416159 IL32P24001 234 aa15.63■□□□□ 0.09
PDLIM2-208ENST00000416159 ADSLP30566 484 aaPredicted RBP15.63■□□□□ 0.09
PDLIM2-208ENST00000416159 APOBEC1P41238 236 aaKnown RBP15.63■□□□□ 0.09
PDLIM2-208ENST00000416159 ANXA11P50995 505 aaKnown RBP15.63■□□□□ 0.09
PDLIM2-208ENST00000416159 UFM1P61960 85 aa15.63■□□□□ 0.09
PDLIM2-208ENST00000416159 TXNL4AP83876 142 aaKnown RBP15.63■□□□□ 0.09
PDLIM2-208ENST00000416159 HPCAP84074 193 aa15.63■□□□□ 0.09
PDLIM2-208ENST00000416159 LRRC74AQ0VAA2 488 aa15.63■□□□□ 0.09
PDLIM2-208ENST00000416159 RASGEF1BQ0VAM2 473 aa15.63■□□□□ 0.09
PDLIM2-208ENST00000416159 MERTKQ12866 999 aa15.63■□□□□ 0.09
PDLIM2-208ENST00000416159 P2RY6Q15077 328 aa15.63■□□□□ 0.09
PDLIM2-208ENST00000416159 GPAT3Q53EU6 434 aa15.63■□□□□ 0.09
PDLIM2-208ENST00000416159 FRRS1Q6ZNA5 592 aa15.63■□□□□ 0.09
PDLIM2-208ENST00000416159 TMPPEQ6ZT21 453 aa15.63■□□□□ 0.09
PDLIM2-208ENST00000416159 TRIML2Q8N7C3 387 aa15.63■□□□□ 0.09
PDLIM2-208ENST00000416159 FAM71CQ8NEG0 241 aa15.63■□□□□ 0.09
PDLIM2-208ENST00000416159 ZNF563Q8TA94 476 aa15.63■□□□□ 0.09
PDLIM2-208ENST00000416159 SLC25A43Q8WUT9 341 aaPredicted RBP15.63■□□□□ 0.09
PDLIM2-208ENST00000416159 S100PBPQ96BU1 408 aa15.63■□□□□ 0.09
PDLIM2-208ENST00000416159 THAP1Q9NVV9 213 aa15.63■□□□□ 0.09
PDLIM2-208ENST00000416159 SPIN1Q9Y657 262 aaPredicted RBP15.63■□□□□ 0.09
PDLIM2-208ENST00000416159 NAV3Q8IVL0 2385 aa15.63■□□□□ 0.09
PDLIM2-208ENST00000416159 TRPC5OSA6NMA1 111 aa15.62■□□□□ 0.09
PDLIM2-208ENST00000416159 ZNF724A8MTY0 619 aa15.62■□□□□ 0.09
PDLIM2-208ENST00000416159 ADAP00813 363 aa15.62■□□□□ 0.09
PDLIM2-208ENST00000416159 ALDOCP09972 364 aaKnown RBP15.62■□□□□ 0.09
PDLIM2-208ENST00000416159 FKBP2P26885 142 aaKnown RBP15.62■□□□□ 0.09
PDLIM2-208ENST00000416159 NME5P56597 212 aa15.62■□□□□ 0.09
PDLIM2-208ENST00000416159 WDR4P57081 412 aaKnown RBP15.62■□□□□ 0.09
PDLIM2-208ENST00000416159 CSNK2A1P68400 391 aaPredicted RBP15.62■□□□□ 0.09
PDLIM2-208ENST00000416159 KCNJ10P78508 379 aa15.62■□□□□ 0.09
PDLIM2-208ENST00000416159 FUT5Q11128 374 aa15.62■□□□□ 0.09
PDLIM2-208ENST00000416159 ITGADQ13349 1161 aa15.62■□□□□ 0.09
PDLIM2-208ENST00000416159 SYT14P1Q58G82 188 aa15.62■□□□□ 0.09
PDLIM2-208ENST00000416159 HSD17B8Q92506 261 aa15.62■□□□□ 0.09
PDLIM2-208ENST00000416159 KISS1RQ969F8 398 aaPredicted RBP15.62■□□□□ 0.09
PDLIM2-208ENST00000416159 ZBTB9Q96C00 473 aa15.62■□□□□ 0.09
PDLIM2-208ENST00000416159 TEX37Q96LM6 180 aa15.62■□□□□ 0.09
PDLIM2-208ENST00000416159 PANX1Q96RD7 426 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms