RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 IL23AQ9NPF7 189 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 C14orf105Q9NVL8 296 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 CLDND1Q9NY35 253 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 SPHK1Q9NYA1 384 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 OR6C2Q9NZP2 312 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 KCMF1Q9P0J7 381 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 SCML1Q9UN30 329 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 C19orf53Q9UNZ5 99 aaPredicted RBP9.07□□□□□ -0.96
CD44-206ENST00000415148 SLC35A3Q9Y2D2 325 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 CENPVL1A0A0U1RR11 272 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 A0A1W2PPK0 400 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 LINC00862A6NCI5 91 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 G3V3Q6 166 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 I3L521 148 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 MID1O15344 667 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 PTP4A3O75365 173 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 STX11O75558 287 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 UBL3O95164 117 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 PAK4O96013 591 aaPredicted RBP9.07□□□□□ -0.96
CD44-206ENST00000415148 AK1P00568 194 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 CD1AP06126 327 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 NID1P14543 1247 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 SLC2A5P22732 501 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 NDUFS1P28331 727 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 BMP8BP34820 402 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 HTRA3P83110 453 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 DGCR2P98153 550 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 GAS6Q14393 721 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 FGFBP1Q14512 234 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 DUSP5Q16690 384 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 ST3GAL2Q16842 350 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 FAM78AQ5JUQ0 283 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 TMEM65Q6PI78 240 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 LYPD4Q6UWN0 246 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 BMP8AQ7Z5Y6 402 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 SFTPA1Q8IWL2 248 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 CMIPQ8IY22 773 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 C17orf47Q8NEP4 570 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 OR10H4Q8NGA5 316 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 TRMT10AQ8TBZ6 339 aaKnown RBP9.07□□□□□ -0.96
CD44-206ENST00000415148 ADAMTS14Q8WXS8 1223 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 TM4SF19Q96DZ7 209 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 SCARF2Q96GP6 870 aaPredicted RBP9.07□□□□□ -0.96
CD44-206ENST00000415148 LRFN5Q96NI6 719 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 ASB16Q96NS5 453 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 STACQ99469 402 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 TTTY10Q9BZA0 68 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 ACTR6Q9GZN1 396 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 CCDC86Q9H6F5 360 aaKnown RBP9.07□□□□□ -0.96
CD44-206ENST00000415148 ERVMER34-1Q9H9K5 563 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 OBP2AQ9NY56 170 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 SIGLEC7Q9Y286 467 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 STON1Q9Y6Q2 735 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 A0A087WV62 115 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 A0A1B0GTQ1 180 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.06□□□□□ -0.96
CD44-206ENST00000415148 CDHR4A6H8M9 788 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 URADA6NGE7 173 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 SLC9B1P1A6NJY1 282 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 OR52A4PA6NMU1 304 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 RIIAD1A6NNX1 92 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 CTDSPLO15194 276 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 MAGEB4O15481 346 aaPredicted RBP9.06□□□□□ -0.96
CD44-206ENST00000415148 GSTZ1O43708 216 aaPredicted RBP9.06□□□□□ -0.96
CD44-206ENST00000415148 TMEM127O75204 238 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 REM1O75628 298 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 TOXO94900 526 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 RAF1P04049 648 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 HRGP04196 525 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 TCRBP04435 133 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 SAGP10523 405 aaPredicted RBP9.06□□□□□ -0.96
CD44-206ENST00000415148 LAMP2P13473 410 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 NAT1P18440 290 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 RAB3BP20337 219 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 GIFP27352 417 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 ZP1P60852 638 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 RPS21P63220 83 aaKnown RBP9.06□□□□□ -0.96
CD44-206ENST00000415148 CRYZQ08257 329 aaKnown RBP9.06□□□□□ -0.96
CD44-206ENST00000415148 SGCGQ13326 291 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 SUZ12Q15022 739 aaKnown RBP9.06□□□□□ -0.96
CD44-206ENST00000415148 AMZ1Q400G9 498 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 ACSM3Q53FZ2 586 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 FCRLBQ6BAA4 426 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 ZNF613Q6PF04 617 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 ARL9Q6T311 187 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 IDO2Q6ZQW0 420 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 SHISA5Q8N114 240 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 TOMM5Q8N4H5 51 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 KCT2Q8NC54 265 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 OR4C6Q8NH72 309 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 CEP76Q8TAP6 659 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 LRRC20Q8TCA0 184 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 DOK4Q8TEW6 326 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 SMARCD2Q92925 531 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 SLC22A18Q96BI1 424 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 BPIFA2Q96DR5 249 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 WDR89Q96FK6 387 aaPredicted RBP9.06□□□□□ -0.96
CD44-206ENST00000415148 PGLYRP3Q96LB9 341 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 IFT27Q9BW83 186 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 ADGRL4Q9HBW9 690 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms