RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 SPOCK1Q08629 439 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 MERTKQ12866 999 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 PDE7AQ13946 482 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 DMC1Q14565 340 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 KYAT1Q16773 422 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 MEP1AQ16819 746 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 UGP2Q16851 508 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 LRRC36Q1X8D7 754 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 TRIM16LQ309B1 348 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 KIAA1644Q3SXP7 199 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 KLHL26Q53HC5 615 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 RBM48Q5RL73 367 aaKnown RBP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 LDLRAP1Q5SW96 308 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 C6orf52Q5T4I8 152 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 N4BP2L1Q5TBK1 243 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 NDUFAF5Q5TEU4 345 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 AGAP7PQ5VUJ5 663 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 FAM53AQ6NSI3 398 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 CDC42EP5Q6NZY7 148 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 TTC33Q6PID6 262 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 ARSKQ6UWY0 536 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 ZBTB49Q6ZSB9 765 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 USP50Q70EL3 339 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 CENPVQ7Z7K6 275 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 GPALPP1Q8IXQ4 340 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 CENPSQ8N2Z9 138 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 ATP6V0D2Q8N8Y2 350 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 ASCC1Q8N9N2 400 aaKnown RBP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 ADAD2Q8NCV1 583 aaKnown RBP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 PAPD5Q8NDF8 572 aaKnown RBP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 TMEM185AQ8NFB2 350 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 OR13F1Q8NGS4 319 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 WDR20Q8TBZ3 569 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 HCAR2Q8TDS4 363 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 TSEN15Q8WW01 171 aaKnown RBP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 RLN3Q8WXF3 142 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 C12orf43Q96C57 262 aaKnown RBP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 SNRNP40Q96DI7 357 aaKnown RBP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 CENPNQ96H22 339 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 BTN2A3PQ96KV6 586 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 LRR1Q96L50 414 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 C12orf66Q96MD2 445 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 TSNARE1Q96NA8 513 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 MCEEQ96PE7 176 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 PPP1R2P1Q96PQ5 205 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 ZNF607Q96SK3 696 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 CDRT15Q96T59 188 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 KLF6Q99612 283 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 RBM4BQ9BQ04 359 aaKnown RBP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 ABHD6Q9BV23 337 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 KATNB1Q9BVA0 655 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 SHCBP1LQ9BZQ2 653 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 C20orf27Q9GZN8 174 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 HRH4Q9H3N8 390 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 PLK3Q9H4B4 646 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 RAD21L1Q9H4I0 556 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 SP140LQ9H930 580 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 MED20Q9H944 212 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 AKIRIN1Q9H9L7 192 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 EML4Q9HC35 981 aaKnown RBP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 DIABLOQ9NR28 239 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 INIPQ9NRY2 104 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 KLHL28Q9NXS3 571 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 SLC39A1Q9NY26 324 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 NPAP1Q9NZP6 1156 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 TMEM181Q9P2C4 612 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 WRAP73Q9P2S5 460 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 PEF1Q9UBV8 284 aaKnown RBP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 CTSFQ9UBX1 484 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 ZNF639Q9UID6 485 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 EMCNQ9ULC0 261 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 PLCL2Q9UPR0 1127 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 RNF24Q9Y225 148 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 MRPS7Q9Y2R9 242 aaKnown RBP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 STRCP1A6NGW2 1772 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 NRAPQ86VF7 1730 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 COL4A1P02462 1669 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 ZNFX1Q9P2E3 1918 aaKnown RBP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 LRRC37AA6NMS7 1700 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 LOC100509620A0A075B734 347 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 TEX13DA0A0J9YY54 714 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 ASB14A6NK59 587 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 SUPT3HB4E1H0 165 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 G3V2L1 256 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 H3BMQ9 156 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 H7C0C1 242 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 TMEM189-UBE2V1I3L0A0 370 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 HAS3O00219 553 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 PSMD11O00231 422 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 CYB561D2O14569 222 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 AQP9O43315 295 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 CHMP2AO43633 222 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 UGT1A9O60656 530 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 CDK14O94921 469 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 HPRP00739 348 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 GH2P01242 217 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 IGLV1-44P01699 117 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 KRT6AP02538 564 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 CXCL10P02778 98 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms