RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 DBIP07108 87 aaKnown RBP10.04□□□□□ -0.8
RFFL-204ENST00000414419 CD8BP10966 210 aa10.04□□□□□ -0.8
RFFL-204ENST00000414419 POU2F1P14859 743 aa10.04□□□□□ -0.8
RFFL-204ENST00000414419 UQCRBP14927 111 aa10.04□□□□□ -0.8
RFFL-204ENST00000414419 CD79BP40259 229 aa10.04□□□□□ -0.8
RFFL-204ENST00000414419 SLC6A8P48029 635 aa10.04□□□□□ -0.8
RFFL-204ENST00000414419 CRISP3P54108 245 aa10.04□□□□□ -0.8
RFFL-204ENST00000414419 SESN3P58005 492 aa10.04□□□□□ -0.8
RFFL-204ENST00000414419 DSTNP60981 165 aa10.04□□□□□ -0.8
RFFL-204ENST00000414419 MERTKQ12866 999 aa10.04□□□□□ -0.8
RFFL-204ENST00000414419 SLC25A53Q5H9E4 307 aa10.04□□□□□ -0.8
RFFL-204ENST00000414419 C3orf33Q6P1S2 294 aa10.04□□□□□ -0.8
RFFL-204ENST00000414419 CDH24Q86UP0 819 aa10.04□□□□□ -0.8
RFFL-204ENST00000414419 STK32CQ86UX6 486 aa10.04□□□□□ -0.8
RFFL-204ENST00000414419 OR6K3Q8NGY3 331 aa10.04□□□□□ -0.8
RFFL-204ENST00000414419 WDR60Q8WVS4 1066 aa10.04□□□□□ -0.8
RFFL-204ENST00000414419 ROBO4Q8WZ75 1007 aa10.04□□□□□ -0.8
RFFL-204ENST00000414419 ZG16BQ96DA0 208 aa10.04□□□□□ -0.8
RFFL-204ENST00000414419 GPATCH1Q9BRR8 931 aaKnown RBP10.04□□□□□ -0.8
RFFL-204ENST00000414419 QRSL1Q9H0R6 528 aaKnown RBP10.04□□□□□ -0.8
RFFL-204ENST00000414419 SLC38A1Q9H2H9 487 aa10.04□□□□□ -0.8
RFFL-204ENST00000414419 CLEC4MQ9H2X3 399 aaPredicted RBP10.04□□□□□ -0.8
RFFL-204ENST00000414419 RABEP2Q9H5N1 569 aa10.04□□□□□ -0.8
RFFL-204ENST00000414419 SLC6A13Q9NSD5 602 aa10.04□□□□□ -0.8
RFFL-204ENST00000414419 CCDC167Q9P0B6 97 aa10.04□□□□□ -0.8
RFFL-204ENST00000414419 CLEC4AQ9UMR7 237 aa10.04□□□□□ -0.8
RFFL-204ENST00000414419 EDARQ9UNE0 448 aa10.04□□□□□ -0.8
RFFL-204ENST00000414419 SPIN1Q9Y657 262 aaPredicted RBP10.04□□□□□ -0.8
RFFL-204ENST00000414419 PDZD2O15018 2839 aa10.04□□□□□ -0.8
RFFL-204ENST00000414419 SH3D21A4FU49 640 aa10.03□□□□□ -0.8
RFFL-204ENST00000414419 AGAP5A6NIR3 686 aa10.03□□□□□ -0.8
RFFL-204ENST00000414419 CLIC1O00299 241 aa10.03□□□□□ -0.8
RFFL-204ENST00000414419 NR5A2O00482 541 aa10.03□□□□□ -0.8
RFFL-204ENST00000414419 SS18L1O75177 396 aaPredicted RBP10.03□□□□□ -0.8
RFFL-204ENST00000414419 SASH3O75995 380 aa10.03□□□□□ -0.8
RFFL-204ENST00000414419 NTN1O95631 604 aa10.03□□□□□ -0.8
RFFL-204ENST00000414419 BCHEP06276 602 aa10.03□□□□□ -0.8
RFFL-204ENST00000414419 CHRM4P08173 479 aa10.03□□□□□ -0.8
RFFL-204ENST00000414419 TFPIP10646 304 aa10.03□□□□□ -0.8
RFFL-204ENST00000414419 ETFAP13804 333 aa10.03□□□□□ -0.8
RFFL-204ENST00000414419 NCF2P19878 526 aaPredicted RBP10.03□□□□□ -0.8
RFFL-204ENST00000414419 SHC1P29353 583 aa10.03□□□□□ -0.8
RFFL-204ENST00000414419 APOBEC1P41238 236 aaKnown RBP10.03□□□□□ -0.8
RFFL-204ENST00000414419 MRPL19P49406 292 aaKnown RBP10.03□□□□□ -0.8
RFFL-204ENST00000414419 FAM27E3Q08E93 113 aa10.03□□□□□ -0.8
RFFL-204ENST00000414419 DAZAP2Q15038 168 aaPredicted RBP10.03□□□□□ -0.8
RFFL-204ENST00000414419 RNPS1Q15287 305 aaKnown RBP10.03□□□□□ -0.8
RFFL-204ENST00000414419 ZNF239Q16600 458 aaKnown RBP10.03□□□□□ -0.8
RFFL-204ENST00000414419 EXOC3L2Q2M3D2 409 aa10.03□□□□□ -0.8
RFFL-204ENST00000414419 AGKQ53H12 422 aa10.03□□□□□ -0.8
RFFL-204ENST00000414419 FREM1Q5H8C1 2179 aa10.03□□□□□ -0.8
RFFL-204ENST00000414419 TMEM201Q5SNT2 666 aa10.03□□□□□ -0.8
RFFL-204ENST00000414419 SLC2A7Q6PXP3 512 aa10.03□□□□□ -0.8
RFFL-204ENST00000414419 PLEKHM3Q6ZWE6 761 aa10.03□□□□□ -0.8
RFFL-204ENST00000414419 FCRLAQ7L513 359 aa10.03□□□□□ -0.8
RFFL-204ENST00000414419 ZNF610Q8N9Z0 462 aa10.03□□□□□ -0.8
RFFL-204ENST00000414419 CCDC168Q8NDH2 2452 aa10.03□□□□□ -0.8
RFFL-204ENST00000414419 GTF2H4Q92759 462 aa10.03□□□□□ -0.8
RFFL-204ENST00000414419 SPDL1Q96EA4 605 aa10.03□□□□□ -0.8
RFFL-204ENST00000414419 THOC1Q96FV9 657 aaKnown RBP10.03□□□□□ -0.8
RFFL-204ENST00000414419 AURKBQ96GD4 344 aaPredicted RBP10.03□□□□□ -0.8
RFFL-204ENST00000414419 DACH2Q96NX9 599 aa10.03□□□□□ -0.8
RFFL-204ENST00000414419 OR5B2Q96R09 309 aa10.03□□□□□ -0.8
RFFL-204ENST00000414419 ARMC7Q9H6L4 198 aa10.03□□□□□ -0.8
RFFL-204ENST00000414419 EXOSC3Q9NQT5 275 aaKnown RBP10.03□□□□□ -0.8
RFFL-204ENST00000414419 RASSF1Q9NS23 344 aa10.03□□□□□ -0.8
RFFL-204ENST00000414419 ACER3Q9NUN7 267 aa10.03□□□□□ -0.8
RFFL-204ENST00000414419 ZNF232Q9UNY5 417 aa10.03□□□□□ -0.8
RFFL-204ENST00000414419 TRIM33Q9UPN9 1127 aa10.03□□□□□ -0.8
RFFL-204ENST00000414419 PCDHB14Q9Y5E9 798 aa10.03□□□□□ -0.8
RFFL-204ENST00000414419 A0A096LPI6 279 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 A0A1W2PNR3 127 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 CLDN24A6NM45 220 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 C5orf58C9J3I9 102 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 C16orf97H3BN30 126 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 ETV2O00321 342 aaPredicted RBP10.02□□□□□ -0.81
RFFL-204ENST00000414419 DNAJA2O60884 412 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 PRKD3O94806 890 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 GOSR1O95249 250 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 CGAP01215 116 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 NID1P14543 1247 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 ENPP1P22413 925 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 FKBP2P26885 142 aaKnown RBP10.02□□□□□ -0.81
RFFL-204ENST00000414419 HTR3AP46098 478 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 IDH2P48735 452 aaKnown RBP10.02□□□□□ -0.81
RFFL-204ENST00000414419 PCYT1AP49585 367 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 ATP4BP51164 291 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 MVDP53602 400 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 RAC3P60763 192 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 CSNK2A1P68400 391 aaPredicted RBP10.02□□□□□ -0.81
RFFL-204ENST00000414419 FADDQ13158 208 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 SQLEQ14534 574 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 LARS2Q15031 903 aaKnown RBP10.02□□□□□ -0.81
RFFL-204ENST00000414419 GUSBP1Q15486 140 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 RGNQ15493 299 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 GTDC1Q4AE62 458 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 HSP90B2PQ58FF3 399 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 BLOC1S3Q6QNY0 202 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 ZNF474Q6S9Z5 364 aaPredicted RBP10.02□□□□□ -0.81
RFFL-204ENST00000414419 BEND4Q6ZU67 534 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms