RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 HOXB9P17482 250 aaPredicted RBP13.26□□□□□ -0.29
LIMS4-201ENST00000413601 NCF2P19878 526 aaPredicted RBP13.26□□□□□ -0.29
LIMS4-201ENST00000413601 CAPN3P20807 821 aa13.26□□□□□ -0.29
LIMS4-201ENST00000413601 RPS4Y1P22090 263 aaKnown RBP13.26□□□□□ -0.29
LIMS4-201ENST00000413601 ATP4BP51164 291 aa13.26□□□□□ -0.29
LIMS4-201ENST00000413601 SORDQ00796 357 aa13.26□□□□□ -0.29
LIMS4-201ENST00000413601 MERTKQ12866 999 aa13.26□□□□□ -0.29
LIMS4-201ENST00000413601 SELENBP1Q13228 472 aa13.26□□□□□ -0.29
LIMS4-201ENST00000413601 SQLEQ14534 574 aa13.26□□□□□ -0.29
LIMS4-201ENST00000413601 PAGE3Q5JUK9 113 aa13.26□□□□□ -0.29
LIMS4-201ENST00000413601 FAM214BQ7L5A3 538 aa13.26□□□□□ -0.29
LIMS4-201ENST00000413601 ARFGAP2Q8N6H7 521 aa13.26□□□□□ -0.29
LIMS4-201ENST00000413601 ZNF563Q8TA94 476 aa13.26□□□□□ -0.29
LIMS4-201ENST00000413601 FAM222BQ8WU58 562 aa13.26□□□□□ -0.29
LIMS4-201ENST00000413601 SLC38A5Q8WUX1 472 aa13.26□□□□□ -0.29
LIMS4-201ENST00000413601 WDR60Q8WVS4 1066 aa13.26□□□□□ -0.29
LIMS4-201ENST00000413601 TMEM234Q8WY98 164 aa13.26□□□□□ -0.29
LIMS4-201ENST00000413601 SRXN1Q9BYN0 137 aa13.26□□□□□ -0.29
LIMS4-201ENST00000413601 ACER3Q9NUN7 267 aa13.26□□□□□ -0.29
LIMS4-201ENST00000413601 SLAMF8Q9P0V8 285 aa13.26□□□□□ -0.29
LIMS4-201ENST00000413601 A0A1W2PNR3 127 aa13.25□□□□□ -0.29
LIMS4-201ENST00000413601 ADAM11O75078 769 aa13.25□□□□□ -0.29
LIMS4-201ENST00000413601 DBIP07108 87 aaKnown RBP13.25□□□□□ -0.29
LIMS4-201ENST00000413601 NUDT7P0C024 238 aa13.25□□□□□ -0.29
LIMS4-201ENST00000413601 SLC7A1P30825 629 aa13.25□□□□□ -0.29
LIMS4-201ENST00000413601 CTBP2P56545 445 aa13.25□□□□□ -0.29
LIMS4-201ENST00000413601 FAM27E3Q08E93 113 aa13.25□□□□□ -0.29
LIMS4-201ENST00000413601 RGNQ15493 299 aa13.25□□□□□ -0.29
LIMS4-201ENST00000413601 ZNF239Q16600 458 aaKnown RBP13.25□□□□□ -0.29
LIMS4-201ENST00000413601 RPS26P11Q5JNZ5 115 aaPredicted RBP13.25□□□□□ -0.29
LIMS4-201ENST00000413601 LRIF1Q5T3J3 769 aa13.25□□□□□ -0.29
LIMS4-201ENST00000413601 C3orf33Q6P1S2 294 aa13.25□□□□□ -0.29
LIMS4-201ENST00000413601 ZNF474Q6S9Z5 364 aaPredicted RBP13.25□□□□□ -0.29
LIMS4-201ENST00000413601 PLEKHM3Q6ZWE6 761 aa13.25□□□□□ -0.29
LIMS4-201ENST00000413601 MSRB3Q8IXL7 192 aa13.25□□□□□ -0.29
LIMS4-201ENST00000413601 CMIPQ8IY22 773 aa13.25□□□□□ -0.29
LIMS4-201ENST00000413601 PEX5LQ8IYB4 626 aa13.25□□□□□ -0.29
LIMS4-201ENST00000413601 ZNF610Q8N9Z0 462 aa13.25□□□□□ -0.29
LIMS4-201ENST00000413601 STON2Q8WXE9 905 aa13.25□□□□□ -0.29
LIMS4-201ENST00000413601 PMM1Q92871 262 aa13.25□□□□□ -0.29
LIMS4-201ENST00000413601 GMPPAQ96IJ6 420 aaPredicted RBP13.25□□□□□ -0.29
LIMS4-201ENST00000413601 COQ10BQ9H8M1 238 aa13.25□□□□□ -0.29
LIMS4-201ENST00000413601 TIGARQ9NQ88 270 aa13.25□□□□□ -0.29
LIMS4-201ENST00000413601 EXOSC3Q9NQT5 275 aaKnown RBP13.25□□□□□ -0.29
LIMS4-201ENST00000413601 SLC25A37Q9NYZ2 338 aa13.25□□□□□ -0.29
LIMS4-201ENST00000413601 CALML5Q9NZT1 146 aa13.25□□□□□ -0.29
LIMS4-201ENST00000413601 PROCRQ9UNN8 238 aa13.25□□□□□ -0.29
LIMS4-201ENST00000413601 EMC9Q9Y3B6 208 aa13.25□□□□□ -0.29
LIMS4-201ENST00000413601 FREM1Q5H8C1 2179 aa13.24□□□□□ -0.29
LIMS4-201ENST00000413601 DSPPQ9NZW4 1301 aa13.24□□□□□ -0.29
LIMS4-201ENST00000413601 A0A0G2JND7 137 aa13.24□□□□□ -0.29
LIMS4-201ENST00000413601 AP3D1O14617 1153 aa13.24□□□□□ -0.29
LIMS4-201ENST00000413601 SS18L1O75177 396 aaPredicted RBP13.24□□□□□ -0.29
LIMS4-201ENST00000413601 CTAG2O75638 210 aa13.24□□□□□ -0.29
LIMS4-201ENST00000413601 CD8BP10966 210 aa13.24□□□□□ -0.29
LIMS4-201ENST00000413601 EPXP11678 715 aa13.24□□□□□ -0.29
LIMS4-201ENST00000413601 NID1P14543 1247 aa13.24□□□□□ -0.29
LIMS4-201ENST00000413601 IDH2P48735 452 aaKnown RBP13.24□□□□□ -0.29
LIMS4-201ENST00000413601 CRISP3P54108 245 aa13.24□□□□□ -0.29
LIMS4-201ENST00000413601 IRX1P78414 480 aaPredicted RBP13.24□□□□□ -0.29
LIMS4-201ENST00000413601 GNA13Q14344 377 aa13.24□□□□□ -0.29
LIMS4-201ENST00000413601 MRPL2Q5T653 305 aaKnown RBP13.24□□□□□ -0.29
LIMS4-201ENST00000413601 VRK2Q86Y07 508 aa13.24□□□□□ -0.29
LIMS4-201ENST00000413601 OR52P1PQ8NH57 321 aa13.24□□□□□ -0.29
LIMS4-201ENST00000413601 MAL2Q969L2 176 aa13.24□□□□□ -0.29
LIMS4-201ENST00000413601 CPNE4Q96A23 557 aaPredicted RBP13.24□□□□□ -0.29
LIMS4-201ENST00000413601 TMEM19Q96HH6 336 aa13.24□□□□□ -0.29
LIMS4-201ENST00000413601 REXO5Q96IC2 774 aaKnown RBP13.24□□□□□ -0.29
LIMS4-201ENST00000413601 OR5B2Q96R09 309 aa13.24□□□□□ -0.29
LIMS4-201ENST00000413601 GPATCH1Q9BRR8 931 aaKnown RBP13.24□□□□□ -0.29
LIMS4-201ENST00000413601 CCDC106Q9BWC9 280 aa13.24□□□□□ -0.29
LIMS4-201ENST00000413601 RAD21L1Q9H4I0 556 aa13.24□□□□□ -0.29
LIMS4-201ENST00000413601 RABEP2Q9H5N1 569 aa13.24□□□□□ -0.29
LIMS4-201ENST00000413601 CTPS2Q9NRF8 586 aa13.24□□□□□ -0.29
LIMS4-201ENST00000413601 SERINC1Q9NRX5 453 aa13.24□□□□□ -0.29
LIMS4-201ENST00000413601 RLIMQ9NVW2 624 aa13.24□□□□□ -0.29
LIMS4-201ENST00000413601 TMEM45AQ9NWC5 275 aa13.24□□□□□ -0.29
LIMS4-201ENST00000413601 THUMPD1Q9NXG2 353 aaKnown RBP13.24□□□□□ -0.29
LIMS4-201ENST00000413601 DNAJB12Q9NXW2 375 aaKnown RBP13.24□□□□□ -0.29
LIMS4-201ENST00000413601 VAPAQ9P0L0 249 aa13.24□□□□□ -0.29
LIMS4-201ENST00000413601 UQCRHLA0A096LP55 91 aa13.23□□□□□ -0.29
LIMS4-201ENST00000413601 IGHV3-15A0A0B4J1V0 119 aa13.23□□□□□ -0.29
LIMS4-201ENST00000413601 TMEM247A6NEH6 219 aa13.23□□□□□ -0.29
LIMS4-201ENST00000413601 A6NNC1 897 aa13.23□□□□□ -0.29
LIMS4-201ENST00000413601 ENPP1P22413 925 aa13.23□□□□□ -0.29
LIMS4-201ENST00000413601 CD79BP40259 229 aa13.23□□□□□ -0.29
LIMS4-201ENST00000413601 APOBEC1P41238 236 aaKnown RBP13.23□□□□□ -0.29
LIMS4-201ENST00000413601 KCNJ5P48544 419 aa13.23□□□□□ -0.29
LIMS4-201ENST00000413601 FADDQ13158 208 aa13.23□□□□□ -0.29
LIMS4-201ENST00000413601 DAZAP2Q15038 168 aaPredicted RBP13.23□□□□□ -0.29
LIMS4-201ENST00000413601 GTF2IRD2BQ6EKJ0 949 aa13.23□□□□□ -0.29
LIMS4-201ENST00000413601 ZNF836Q6ZNA1 936 aa13.23□□□□□ -0.29
LIMS4-201ENST00000413601 FCRLAQ7L513 359 aa13.23□□□□□ -0.29
LIMS4-201ENST00000413601 GTF2IRD2Q86UP8 949 aa13.23□□□□□ -0.29
LIMS4-201ENST00000413601 LSRQ86X29 649 aaPredicted RBP13.23□□□□□ -0.29
LIMS4-201ENST00000413601 OR6K3Q8NGY3 331 aa13.23□□□□□ -0.29
LIMS4-201ENST00000413601 RNF128Q8TEB7 428 aa13.23□□□□□ -0.29
LIMS4-201ENST00000413601 ABHD3Q8WU67 409 aa13.23□□□□□ -0.29
LIMS4-201ENST00000413601 NRGNQ92686 78 aa13.23□□□□□ -0.29
LIMS4-201ENST00000413601 SIKE1Q9BRV8 207 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms