RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 TNFSF13O75888 250 aa9.04□□□□□ -0.96
TMEM248-202ENST00000413593 AQP8O94778 261 aa9.04□□□□□ -0.96
TMEM248-202ENST00000413593 CRHP06850 196 aa9.04□□□□□ -0.96
TMEM248-202ENST00000413593 ARAFP10398 606 aa9.04□□□□□ -0.96
TMEM248-202ENST00000413593 FCGR2AP12318 317 aa9.04□□□□□ -0.96
TMEM248-202ENST00000413593 PRF1P14222 555 aa9.04□□□□□ -0.96
TMEM248-202ENST00000413593 RYKP34925 604 aa9.04□□□□□ -0.96
TMEM248-202ENST00000413593 SFTPDP35247 375 aa9.04□□□□□ -0.96
TMEM248-202ENST00000413593 SLC6A8P48029 635 aa9.04□□□□□ -0.96
TMEM248-202ENST00000413593 SELENBP1Q13228 472 aa9.04□□□□□ -0.96
TMEM248-202ENST00000413593 TMEM176BQ3YBM2 270 aaPredicted RBP9.04□□□□□ -0.96
TMEM248-202ENST00000413593 LIN52Q52LA3 116 aa9.04□□□□□ -0.96
TMEM248-202ENST00000413593 PDSS1Q5T2R2 415 aa9.04□□□□□ -0.96
TMEM248-202ENST00000413593 GCNT6Q5T4J0 391 aa9.04□□□□□ -0.96
TMEM248-202ENST00000413593 MRPL2Q5T653 305 aaKnown RBP9.04□□□□□ -0.96
TMEM248-202ENST00000413593 PRAMEF8Q5VWM4 474 aa9.04□□□□□ -0.96
TMEM248-202ENST00000413593 PRAMEF7Q5VXH5 474 aa9.04□□□□□ -0.96
TMEM248-202ENST00000413593 HBMQ6B0K9 141 aa9.04□□□□□ -0.96
TMEM248-202ENST00000413593 OR2A2Q6IF42 318 aa9.04□□□□□ -0.96
TMEM248-202ENST00000413593 MEX3BQ6ZN04 569 aaKnown RBP9.04□□□□□ -0.96
TMEM248-202ENST00000413593 ZNF836Q6ZNA1 936 aa9.04□□□□□ -0.96
TMEM248-202ENST00000413593 PLEKHM3Q6ZWE6 761 aa9.04□□□□□ -0.96
TMEM248-202ENST00000413593 VRK2Q86Y07 508 aa9.04□□□□□ -0.96
TMEM248-202ENST00000413593 BBS10Q8TAM1 723 aa9.04□□□□□ -0.96
TMEM248-202ENST00000413593 C10orf82Q8WW14 230 aa9.04□□□□□ -0.96
TMEM248-202ENST00000413593 TMEM234Q8WY98 164 aa9.04□□□□□ -0.96
TMEM248-202ENST00000413593 ANKRD27Q96NW4 1050 aa9.04□□□□□ -0.96
TMEM248-202ENST00000413593 CGREF1Q99674 301 aa9.04□□□□□ -0.96
TMEM248-202ENST00000413593 COQ10BQ9H8M1 238 aa9.04□□□□□ -0.96
TMEM248-202ENST00000413593 RNF122Q9H9V4 155 aa9.04□□□□□ -0.96
TMEM248-202ENST00000413593 SAR1AQ9NR31 198 aa9.04□□□□□ -0.96
TMEM248-202ENST00000413593 ACER3Q9NUN7 267 aa9.04□□□□□ -0.96
TMEM248-202ENST00000413593 PAQR5Q9NXK6 330 aaPredicted RBP9.04□□□□□ -0.96
TMEM248-202ENST00000413593 JKAMPQ9P055 326 aa9.04□□□□□ -0.96
TMEM248-202ENST00000413593 CORO2BQ9UQ03 480 aa9.04□□□□□ -0.96
TMEM248-202ENST00000413593 CDHR4A6H8M9 788 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 EVPLLA8MZ36 301 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 EEF1E1-BLOC1S5C9J1V9 151 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 C5orf58C9J3I9 102 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 SYT5O00445 386 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 FAAHO00519 579 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 FBP2O00757 339 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 AP3D1O14617 1153 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 EEF1E1O43324 174 aaKnown RBP9.03□□□□□ -0.96
TMEM248-202ENST00000413593 PGM3O95394 542 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 THBS1P07996 1170 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 UQCRC1P31930 480 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 KIR2DL2P43627 348 aaPredicted RBP9.03□□□□□ -0.96
TMEM248-202ENST00000413593 CARD18P57730 90 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 EEF1A1P68104 462 aaKnown RBP9.03□□□□□ -0.96
TMEM248-202ENST00000413593 MERTKQ12866 999 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 EPS8Q12929 822 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 KLF10Q13118 480 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 NFYCQ13952 458 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 SELPLGQ14242 412 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 LARS2Q15031 903 aaKnown RBP9.03□□□□□ -0.96
TMEM248-202ENST00000413593 GUSBP1Q15486 140 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 ADRM1Q16186 407 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 RNF220Q5VTB9 566 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 EEF1A1P5Q5VTE0 462 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 PPP4R4Q6NUP7 873 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 C3orf33Q6P1S2 294 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 GRINAQ7Z429 371 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 MCEMP1Q8IX19 187 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 DMRTC2Q8IXT2 367 aaPredicted RBP9.03□□□□□ -0.96
TMEM248-202ENST00000413593 ZNF295-AS1Q8N0V1 137 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 ATP6V1C2Q8NEY4 427 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 ZNF563Q8TA94 476 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 OSTF1Q92882 214 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 RNASE6Q93091 150 aaKnown RBP9.03□□□□□ -0.96
TMEM248-202ENST00000413593 CCDC106Q9BWC9 280 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 TRIM8Q9BZR9 551 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 PIGMQ9H3S5 423 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 TMEM38AQ9H6F2 299 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 RLIMQ9NVW2 624 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 PACSIN3Q9UKS6 424 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 MCTS1Q9ULC4 181 aaKnown RBP9.03□□□□□ -0.96
TMEM248-202ENST00000413593 ZNF443Q9Y2A4 671 aaPredicted RBP9.03□□□□□ -0.96
TMEM248-202ENST00000413593 CHST2Q9Y4C5 530 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 NAV2Q8IVL1 2488 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 CACNA1CQ13936 2221 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 KIAA1549Q9HCM3 1950 aa9.03□□□□□ -0.96
TMEM248-202ENST00000413593 CFAP73A6NFT4 308 aa9.02□□□□□ -0.97
TMEM248-202ENST00000413593 FXYD1O00168 92 aa9.02□□□□□ -0.97
TMEM248-202ENST00000413593 SLC22A2O15244 555 aa9.02□□□□□ -0.97
TMEM248-202ENST00000413593 SYNGR4O95473 234 aa9.02□□□□□ -0.97
TMEM248-202ENST00000413593 PABPC4LP0CB38 370 aaKnown RBP9.02□□□□□ -0.97
TMEM248-202ENST00000413593 UQCRBP14927 111 aa9.02□□□□□ -0.97
TMEM248-202ENST00000413593 ETS2P15036 469 aa9.02□□□□□ -0.97
TMEM248-202ENST00000413593 ADSLP30566 484 aaPredicted RBP9.02□□□□□ -0.97
TMEM248-202ENST00000413593 SLC7A1P30825 629 aa9.02□□□□□ -0.97
TMEM248-202ENST00000413593 APOBEC1P41238 236 aaKnown RBP9.02□□□□□ -0.97
TMEM248-202ENST00000413593 IDH2P48735 452 aaKnown RBP9.02□□□□□ -0.97
TMEM248-202ENST00000413593 SEC24CP53992 1094 aa9.02□□□□□ -0.97
TMEM248-202ENST00000413593 MTPNP58546 118 aa9.02□□□□□ -0.97
TMEM248-202ENST00000413593 CDK6Q00534 326 aa9.02□□□□□ -0.97
TMEM248-202ENST00000413593 CAPRIN1Q14444 709 aaKnown RBP9.02□□□□□ -0.97
TMEM248-202ENST00000413593 MAPRE2Q15555 327 aa9.02□□□□□ -0.97
TMEM248-202ENST00000413593 ZNF239Q16600 458 aaKnown RBP9.02□□□□□ -0.97
TMEM248-202ENST00000413593 ZSWIM7Q19AV6 140 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms