RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 OR10D3Q8NH80 312 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 FBXO27Q8NI29 283 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 ZNF563Q8TA94 476 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 BBS10Q8TAM1 723 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 WDR60Q8WVS4 1066 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 RAB8BQ92930 207 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 INTS12Q96CB8 462 aaKnown RBP5.74□□□□□ -1.49
USP54-202ENST00000413442 DDIT4LQ96D03 193 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 STARD4Q96DR4 205 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 RNF145Q96MT1 663 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 NAA11Q9BSU3 229 aaPredicted RBP5.74□□□□□ -1.49
USP54-202ENST00000413442 RBM24Q9BX46 236 aaKnown RBP5.74□□□□□ -1.49
USP54-202ENST00000413442 ADAM19Q9H013 955 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 SLC38A1Q9H2H9 487 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 BCO1Q9HAY6 547 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 A4GALTQ9NPC4 353 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 SLCO1B3Q9NPD5 702 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 NGBQ9NPG2 151 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 NPDC1Q9NQX5 325 aaPredicted RBP5.74□□□□□ -1.49
USP54-202ENST00000413442 KLHL28Q9NXS3 571 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 CCDC167Q9P0B6 97 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 KLHL9Q9P2J3 617 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 PROCRQ9UNN8 238 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 VDAC3Q9Y277 283 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 GPR52Q9Y2T5 361 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 L3MBTL1Q9Y468 752 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 PCDHB14Q9Y5E9 798 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 HEATR5AQ86XA9 2040 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 SETXQ7Z333 2677 aaKnown RBP5.73□□□□□ -1.49
USP54-202ENST00000413442 A0A0J9YW62 118 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 CDHR4A6H8M9 788 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 NKX2-6A6NCS4 301 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 CFAP73A6NFT4 308 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 BBIP1A8MTZ0 92 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 ANGPT2O15123 496 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 ZNHIT1O43257 154 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 OR2T1O43869 369 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 CYTIPO60759 359 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 CCDC22O60826 627 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 NME6O75414 186 aaPredicted RBP5.73□□□□□ -1.49
USP54-202ENST00000413442 CTAG2O75638 210 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 PGM3O95394 542 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 H6PDO95479 791 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 TGM6O95932 706 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 CGAP01215 116 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 NCF2P19878 526 aaPredicted RBP5.73□□□□□ -1.49
USP54-202ENST00000413442 EFNA1P20827 205 aaPredicted RBP5.73□□□□□ -1.49
USP54-202ENST00000413442 ENPP1P22413 925 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 SLC6A2P23975 617 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 PRKAR1BP31321 381 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 POLR2HP52434 150 aaKnown RBP5.73□□□□□ -1.49
USP54-202ENST00000413442 CLDN20P56880 219 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 SESN3P58005 492 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 SLC35A1P78382 337 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 CHRNEQ04844 493 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 MYBPHQ13203 477 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 MFSD13AQ14CX5 517 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 CDSNQ15517 529 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 SYPL1Q16563 259 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 CTU2Q2VPK5 515 aaKnown RBP5.73□□□□□ -1.49
USP54-202ENST00000413442 TMEM176BQ3YBM2 270 aaPredicted RBP5.73□□□□□ -1.49
USP54-202ENST00000413442 TIGD2Q4W5G0 525 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 DCST1Q5T197 706 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.73□□□□□ -1.49
USP54-202ENST00000413442 INTS11Q5TA45 600 aaKnown RBP5.73□□□□□ -1.49
USP54-202ENST00000413442 FAM219BQ5XKK7 198 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 WBP2NLQ6ICG8 309 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 TNFAIP8L2Q6P589 184 aaPredicted RBP5.73□□□□□ -1.49
USP54-202ENST00000413442 PLEKHM3Q6ZWE6 761 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 MAVSQ7Z434 540 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 ZAR1Q86SH2 424 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 FUNDC1Q8IVP5 155 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 ZNF614Q8N883 585 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 LSMEM1Q8N8F7 131 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 PCYOX1LQ8NBM8 494 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 RELL2Q8NC24 303 aaPredicted RBP5.73□□□□□ -1.49
USP54-202ENST00000413442 NAXEQ8NCW5 288 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 STEAP2Q8NFT2 490 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 OR6S1Q8NH40 331 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 FNDC9Q8TBE3 224 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 POC1BQ8TC44 478 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 RNF128Q8TEB7 428 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 SLC38A5Q8WUX1 472 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 DNAJA4Q8WW22 397 aaPredicted RBP5.73□□□□□ -1.49
USP54-202ENST00000413442 FIG4Q92562 907 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 SH3YL1Q96HL8 342 aaPredicted RBP5.73□□□□□ -1.49
USP54-202ENST00000413442 LURAP1Q96LR2 239 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 INPP5KQ9BT40 448 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 CCDC106Q9BWC9 280 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 SF3B5Q9BWJ5 86 aaKnown RBP5.73□□□□□ -1.49
USP54-202ENST00000413442 PAIP1Q9H074 479 aaKnown RBP5.73□□□□□ -1.49
USP54-202ENST00000413442 SERHL2Q9H4I8 314 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 MOV10Q9HCE1 1003 aaKnown RBP5.73□□□□□ -1.49
USP54-202ENST00000413442 SLC52A3Q9NQ40 469 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 RASSF1Q9NS23 344 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 GID8Q9NWU2 228 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 FLRT3Q9NZU0 649 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 EMC3Q9P0I2 261 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 TMEM181Q9P2C4 612 aa5.73□□□□□ -1.49
USP54-202ENST00000413442 CHRNA9Q9UGM1 479 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms