RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 CCNG1P51959 295 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 PLOD1Q02809 727 aaPredicted RBP3.82□□□□□ -1.8
BRCA1-204ENST00000412061 KLRC3Q07444 240 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 ARL16Q0P5N6 197 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 GCKRQ14397 625 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 FASTKD3Q14CZ7 662 aaKnown RBP3.82□□□□□ -1.8
BRCA1-204ENST00000412061 EMC2Q15006 297 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 ZNF718Q3SXZ3 478 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 C6orf183Q5T699 404 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 OR52W1Q6IF63 320 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 SASS6Q6UVJ0 657 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 LRRC31Q6UY01 552 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 NIPA1Q7RTP0 329 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 CIARTQ8N365 385 aaPredicted RBP3.82□□□□□ -1.8
BRCA1-204ENST00000412061 MARVELD2Q8N4S9 558 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 FAM86B1Q8N7N1 296 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 TMEM104Q8NE00 496 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 OR4F6Q8NGB9 312 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 OR9G4Q8NGQ1 327 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 OR6F1Q8NGZ6 308 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 CCDC12Q8WUD4 166 aaPredicted RBP3.82□□□□□ -1.8
BRCA1-204ENST00000412061 PDCD6IPQ8WUM4 868 aaKnown RBP3.82□□□□□ -1.8
BRCA1-204ENST00000412061 UBE2E3Q969T4 207 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 NSMCE3Q96MG7 304 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 CNN2Q99439 309 aaKnown RBP3.82□□□□□ -1.8
BRCA1-204ENST00000412061 P2RY13Q9BPV8 354 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 MAPKAP1Q9BPZ7 522 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 PRRG3Q9BZD7 231 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 PPA2Q9H2U2 334 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 ATP13A3Q9H7F0 1226 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 UGT1A10Q9HAW8 530 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 PARVGQ9HBI0 331 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 MYOZ2Q9NPC6 264 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 DYRK4Q9NR20 520 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 NUDT15Q9NV35 164 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 BFARQ9NZS9 450 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 KLK11Q9UBX7 282 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 CD300AQ9UGN4 299 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 OARD1Q9Y530 152 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 MROH7-TTC4A0A0A0MT08 1334 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 SH3TC1Q8TE82 1336 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 FAM172BPA6NC97 362 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 IQCF5A8MTL0 148 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 ZNF724A8MTY0 619 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 A8MXQ7 604 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 AP2A1O95782 977 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 IGHG3P01860 377 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 TPM3P06753 285 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 UBCP0CG48 685 aaKnown RBP3.81□□□□□ -1.8
BRCA1-204ENST00000412061 POLR2EP19388 210 aaKnown RBP3.81□□□□□ -1.8
BRCA1-204ENST00000412061 EIF2S2P20042 333 aaKnown RBP3.81□□□□□ -1.8
BRCA1-204ENST00000412061 RRM2P31350 389 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 RPL4P36578 427 aaKnown RBP3.81□□□□□ -1.8
BRCA1-204ENST00000412061 SLC1A2P43004 574 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 GNPDA1P46926 289 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 POU3F4P49335 361 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 KRTAP10-9P60411 292 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 RPS6P62753 249 aaKnown RBP3.81□□□□□ -1.8
BRCA1-204ENST00000412061 RPS27AP62979 156 aaKnown RBP3.81□□□□□ -1.8
BRCA1-204ENST00000412061 TNNC1P63316 161 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 CSNK2BP67870 215 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 TMEM187Q14656 261 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 CD226Q15762 336 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 SLC15A2Q16348 729 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 WDR38Q5JTN6 314 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 LGSNQ5TDP6 509 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 C19orf48Q6RUI8 117 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 ADAMTSL5Q6ZMM2 481 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 STXBP4Q6ZWJ1 553 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 MARCH9Q86YJ5 346 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 CCDC65Q8IXS2 484 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 KIR3DL3Q8N743 410 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 KLHDC9Q8NEP7 349 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 OR4D9Q8NGE8 314 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 OR9Q2Q8NGE9 314 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 OR51L1Q8NGJ5 315 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 OR4A4PQ8NGN8 299 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 TBCKQ8TEA7 893 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 DDI1Q8WTU0 396 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 GATAD1Q8WUU5 269 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 TM9SF4Q92544 642 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 ANP32BQ92688 251 aaKnown RBP3.81□□□□□ -1.8
BRCA1-204ENST00000412061 ITFG2Q969R8 447 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 BIRC7Q96CA5 298 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 CXorf40BQ96DE9 158 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 DNAJA3Q96EY1 480 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 PLEKHA8Q96JA3 519 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 FAM218AQ96MZ4 157 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 CLCC1Q96S66 551 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 EPYCQ99645 322 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 C19orf43Q9BQ61 176 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 NIPSNAP3BQ9BS92 247 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 RHBGQ9H310 441 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 NMUR1Q9HB89 426 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 ZNF334Q9HCZ1 680 aaPredicted RBP3.81□□□□□ -1.8
BRCA1-204ENST00000412061 STX18Q9P2W9 335 aaKnown RBP3.81□□□□□ -1.8
BRCA1-204ENST00000412061 CTSFQ9UBX1 484 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 PHF11Q9UIL8 331 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 KCNG2Q9UJ96 466 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 NUP50Q9UKX7 468 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms