RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 TBXA2RP21731 343 aa12.51□□□□□ -0.41
LIMS1-205ENST00000410093 SSTR4P31391 388 aa12.51□□□□□ -0.41
LIMS1-205ENST00000410093 ARRB1P49407 418 aaPredicted RBP12.51□□□□□ -0.41
LIMS1-205ENST00000410093 RNF144AP50876 292 aaPredicted RBP12.51□□□□□ -0.41
LIMS1-205ENST00000410093 GFERP55789 205 aa12.51□□□□□ -0.41
LIMS1-205ENST00000410093 FOXK2Q01167 660 aa12.51□□□□□ -0.41
LIMS1-205ENST00000410093 SQSTM1Q13501 440 aa12.51□□□□□ -0.41
LIMS1-205ENST00000410093 ELAVL1Q15717 326 aaKnown RBP12.51□□□□□ -0.41
LIMS1-205ENST00000410093 CD200R1LQ6Q8B3 271 aa12.51□□□□□ -0.41
LIMS1-205ENST00000410093 GPALPP1Q8IXQ4 340 aa12.51□□□□□ -0.41
LIMS1-205ENST00000410093 ACBD7Q8N6N7 88 aa12.51□□□□□ -0.41
LIMS1-205ENST00000410093 BCORP1Q8N888 145 aa12.51□□□□□ -0.41
LIMS1-205ENST00000410093 DRAXINQ8NBI3 349 aaPredicted RBP12.51□□□□□ -0.41
LIMS1-205ENST00000410093 SLC41A2Q96JW4 573 aa12.51□□□□□ -0.41
LIMS1-205ENST00000410093 KCTD7Q96MP8 289 aa12.51□□□□□ -0.41
LIMS1-205ENST00000410093 WDFY2Q96P53 400 aa12.51□□□□□ -0.41
LIMS1-205ENST00000410093 CCDC32Q9BV29 185 aa12.51□□□□□ -0.41
LIMS1-205ENST00000410093 DUSP23Q9BVJ7 150 aa12.51□□□□□ -0.41
LIMS1-205ENST00000410093 EXOSC4Q9NPD3 245 aaKnown RBP12.51□□□□□ -0.41
LIMS1-205ENST00000410093 LANCL2Q9NS86 450 aa12.51□□□□□ -0.41
LIMS1-205ENST00000410093 DAPK2Q9UIK4 370 aa12.51□□□□□ -0.41
LIMS1-205ENST00000410093 KLHL21Q9UJP4 597 aa12.51□□□□□ -0.41
LIMS1-205ENST00000410093 CDV3Q9UKY7 258 aaKnown RBP12.51□□□□□ -0.41
LIMS1-205ENST00000410093 ICAM5Q9UMF0 924 aa12.51□□□□□ -0.41
LIMS1-205ENST00000410093 SPIN1Q9Y657 262 aaPredicted RBP12.51□□□□□ -0.41
LIMS1-205ENST00000410093 A0A087WUJ7 227 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 TRDV1A0A1B0GX56 115 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 FRG2CA6NGY1 282 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 OR6C76A6NM76 312 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 C17orf105B2RV13 164 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 PRR23D1E9PI22 279 aaPredicted RBP12.5□□□□□ -0.41
LIMS1-205ENST00000410093 J3QRE1 110 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 IL33O95760 270 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 CSTAP01040 98 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 HLA-DPB1P04440 258 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 PRR23D2P0DMB1 279 aaPredicted RBP12.5□□□□□ -0.41
LIMS1-205ENST00000410093 PEPDP12955 493 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 MAKP20794 623 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 CFL1P23528 166 aaKnown RBP12.5□□□□□ -0.41
LIMS1-205ENST00000410093 MAOBP27338 520 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 SOX3P41225 446 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 TAS2R43P59537 309 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 ACTC1P68032 377 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 ACTA1P68133 377 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 BTG2P78543 158 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 KLHL26Q53HC5 615 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 LIPKQ5VXJ0 399 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 NIPAL3Q6P499 406 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 NPSR1Q6W5P4 371 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 HSDL2Q6YN16 418 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 WDR88Q6ZMY6 472 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 BCDIN3DQ7Z5W3 292 aaKnown RBP12.5□□□□□ -0.41
LIMS1-205ENST00000410093 OAFQ86UD1 273 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 EGFL6Q8IUX8 553 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 CPOQ8IVL8 374 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 DEFB119Q8N690 84 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 ZNF485Q8NCK3 441 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 FAM71CQ8NEG0 241 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 OR14A16Q8NHC5 309 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 MRPL48Q96GC5 212 aaKnown RBP12.5□□□□□ -0.41
LIMS1-205ENST00000410093 CEP19Q96LK0 163 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 PTCHD1Q96NR3 888 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 IFT27Q9BW83 186 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 SPRTNQ9H040 489 aaPredicted RBP12.5□□□□□ -0.41
LIMS1-205ENST00000410093 ARRDC1-AS1Q9H2J1 176 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 CPNE5Q9HCH3 593 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 ERVK13-1Q9NX77 482 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 SRPK3Q9UPE1 567 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 POLHQ9Y253 713 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 TRAPPC4Q9Y296 219 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 GPR52Q9Y2T5 361 aa12.5□□□□□ -0.41
LIMS1-205ENST00000410093 OTOGLQ3ZCN5 2332 aa12.49□□□□□ -0.41
LIMS1-205ENST00000410093 IGKV3D-11A0A0A0MRZ8 115 aa12.49□□□□□ -0.41
LIMS1-205ENST00000410093 SLC35F4A4IF30 521 aa12.49□□□□□ -0.41
LIMS1-205ENST00000410093 IGKV1D-16P01601 117 aa12.49□□□□□ -0.41
LIMS1-205ENST00000410093 CTSBP07858 339 aa12.49□□□□□ -0.41
LIMS1-205ENST00000410093 ZGLP1P0C6A0 271 aa12.49□□□□□ -0.41
LIMS1-205ENST00000410093 HPGDP15428 266 aa12.49□□□□□ -0.41
LIMS1-205ENST00000410093 SLC6A8P48029 635 aa12.49□□□□□ -0.41
LIMS1-205ENST00000410093 CSNK1EP49674 416 aaKnown RBP12.49□□□□□ -0.41
LIMS1-205ENST00000410093 DEFA1P59665 94 aa12.49□□□□□ -0.41
LIMS1-205ENST00000410093 DEFA3P59666 94 aa12.49□□□□□ -0.41
LIMS1-205ENST00000410093 MAT1AQ00266 395 aaKnown RBP12.49□□□□□ -0.41
LIMS1-205ENST00000410093 CDC20Q12834 499 aa12.49□□□□□ -0.41
LIMS1-205ENST00000410093 CSRP2Q16527 193 aa12.49□□□□□ -0.41
LIMS1-205ENST00000410093 RSPO4Q2I0M5 234 aaPredicted RBP12.49□□□□□ -0.41
LIMS1-205ENST00000410093 WBP2NLQ6ICG8 309 aa12.49□□□□□ -0.41
LIMS1-205ENST00000410093 PLEKHG7Q6ZR37 379 aa12.49□□□□□ -0.41
LIMS1-205ENST00000410093 ZNF554Q86TJ5 538 aa12.49□□□□□ -0.41
LIMS1-205ENST00000410093 ZNF614Q8N883 585 aa12.49□□□□□ -0.41
LIMS1-205ENST00000410093 PFN4Q8NHR9 129 aa12.49□□□□□ -0.41
LIMS1-205ENST00000410093 RNF217Q8TC41 542 aa12.49□□□□□ -0.41
LIMS1-205ENST00000410093 DAZLQ92904 295 aaKnown RBP12.49□□□□□ -0.41
LIMS1-205ENST00000410093 ABTB1Q969K4 478 aaPredicted RBP12.49□□□□□ -0.41
LIMS1-205ENST00000410093 SLC25A46Q96AG3 418 aa12.49□□□□□ -0.41
LIMS1-205ENST00000410093 SGTBQ96EQ0 304 aa12.49□□□□□ -0.41
LIMS1-205ENST00000410093 ZC3H10Q96K80 434 aaKnown RBP12.49□□□□□ -0.41
LIMS1-205ENST00000410093 DPYSL5Q9BPU6 564 aa12.49□□□□□ -0.41
LIMS1-205ENST00000410093 MEPEQ9NQ76 525 aaPredicted RBP12.49□□□□□ -0.41
LIMS1-205ENST00000410093 HINT3Q9NQE9 182 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms