RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 SNNO75324 88 aaPredicted RBP3.77□□□□□ -1.81
CLK1-203ENST00000409769 C8GP07360 202 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 RPS17P08708 135 aaKnown RBP3.77□□□□□ -1.81
CLK1-203ENST00000409769 LINGO3P0C6S8 592 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 ERGP11308 486 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 CEACAM1P13688 526 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 CPA3P15088 417 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 ZNF26P17031 533 aaPredicted RBP3.77□□□□□ -1.81
CLK1-203ENST00000409769 TAC1P20366 129 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 PBLDP30039 288 aaPredicted RBP3.77□□□□□ -1.81
CLK1-203ENST00000409769 ALDH3A1P30838 453 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 GNPDA1P46926 289 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 CDH11P55287 796 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 DNAJB13P59910 316 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 SRP54P61011 504 aaKnown RBP3.77□□□□□ -1.81
CLK1-203ENST00000409769 IRX4P78413 519 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 CDKL1Q00532 357 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 IL9RQ01113 521 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 PPARDQ03181 441 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 HSPA14Q0VDF9 509 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 GRB7Q14451 532 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 NFE2L1Q14494 772 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 ANGPT1Q15389 498 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 TAF13Q15543 124 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 TGFBIQ15582 683 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 TSNQ15631 228 aaKnown RBP3.77□□□□□ -1.81
CLK1-203ENST00000409769 PDLIM3Q53GG5 364 aaPredicted RBP3.77□□□□□ -1.81
CLK1-203ENST00000409769 CDKL4Q5MAI5 379 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 DCAF10Q5QP82 559 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 CES4AQ5XG92 561 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 LYSMD4Q5XG99 296 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 TMEM211Q6ICI0 200 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 ABRAXAS1Q6UWZ7 409 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 WASH2PQ6VEQ5 465 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 LPCAT2Q7L5N7 544 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 ADAMTSL2Q86TH1 951 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 AMZ2Q86W34 360 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 PARGQ86W56 976 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 C10orf107Q8IVU9 208 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 KLHDC8AQ8IYD2 350 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 CFAP206Q8IYR0 622 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 ZNF611Q8N823 705 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 ADAD2Q8NCV1 583 aaKnown RBP3.77□□□□□ -1.81
CLK1-203ENST00000409769 ZNF248Q8NDW4 579 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 CCL4L1Q8NHW4 92 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 RAB3IL1Q8TBN0 382 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 MGARPQ8TDB4 240 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 UBTD2Q8WUN7 234 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 CCDC107Q8WV48 283 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 TSACCQ96A04 125 aaPredicted RBP3.77□□□□□ -1.81
CLK1-203ENST00000409769 SLAMF9Q96A28 289 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 TMEM159Q96B96 161 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 ANKRD9Q96BM1 317 aaPredicted RBP3.77□□□□□ -1.81
CLK1-203ENST00000409769 L3HYPDHQ96EM0 354 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 RMDN2Q96LZ7 410 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 MAGEB18Q96M61 343 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 TSNARE1Q96NA8 513 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 DGAT2Q96PD7 388 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 ZNF317Q96PQ6 595 aaPredicted RBP3.77□□□□□ -1.81
CLK1-203ENST00000409769 TMEM237Q96Q45 408 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 SORT1Q99523 831 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 LRRC61Q9BV99 259 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 FNDC11Q9BVV2 318 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 IQCGQ9H095 443 aaKnown RBP3.77□□□□□ -1.81
CLK1-203ENST00000409769 TCEAL2Q9H3H9 227 aaPredicted RBP3.77□□□□□ -1.81
CLK1-203ENST00000409769 ALG9Q9H6U8 611 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 SDR39U1Q9NRG7 319 aaPredicted RBP3.77□□□□□ -1.81
CLK1-203ENST00000409769 NKIRAS1Q9NYS0 192 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 NUDT4Q9NZJ9 180 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 CPSF2Q9P2I0 782 aaKnown RBP3.77□□□□□ -1.81
CLK1-203ENST00000409769 B3GAT1Q9P2W7 334 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 ANAPC2Q9UJX6 822 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 RPS6KA6Q9UK32 745 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 PILRBQ9UKJ0 227 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 PPIEQ9UNP9 301 aaKnown RBP3.77□□□□□ -1.81
CLK1-203ENST00000409769 PDE10AQ9Y233 779 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 WDR37Q9Y2I8 494 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 OARD1Q9Y530 152 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 DMDP11532 3685 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 OTOGLQ3ZCN5 2332 aa3.77□□□□□ -1.81
CLK1-203ENST00000409769 A0A087X002 238 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 SYNDIG1LA6NDD5 238 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 SYCE1LA8MT33 242 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 A8MV72 311 aaPredicted RBP3.76□□□□□ -1.81
CLK1-203ENST00000409769 TMEM114B3SHH9 223 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 UBXN8O00124 270 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 POLR3GO15318 223 aaPredicted RBP3.76□□□□□ -1.81
CLK1-203ENST00000409769 C1orf105O95561 183 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 BCL10O95999 233 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 TNFP01375 233 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 CSF2P04141 144 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 SERPINE1P05121 402 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 GIMD1P0DJR0 217 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 TPBGLP0DKB5 382 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 MYL2P10916 166 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 F3P13726 295 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 VCLP18206 1134 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 IMPDH1P20839 514 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 CYP2A7P20853 494 aa3.76□□□□□ -1.81
CLK1-203ENST00000409769 BGNP21810 368 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms