RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 ST3GAL4Q11206 333 aa12.92□□□□□ -0.34
LIMS2-206ENST00000409754 SNAPC1Q16533 368 aa12.92□□□□□ -0.34
LIMS2-206ENST00000409754 ALG10BQ5I7T1 473 aa12.92□□□□□ -0.34
LIMS2-206ENST00000409754 UBE2UQ5VVX9 321 aa12.92□□□□□ -0.34
LIMS2-206ENST00000409754 MRPL14Q6P1L8 145 aaKnown RBP12.92□□□□□ -0.34
LIMS2-206ENST00000409754 KIRREL2Q6UWL6 708 aa12.92□□□□□ -0.34
LIMS2-206ENST00000409754 CCDC81Q6ZN84 652 aa12.92□□□□□ -0.34
LIMS2-206ENST00000409754 TMPRSS12Q86WS5 348 aa12.92□□□□□ -0.34
LIMS2-206ENST00000409754 ERI1Q8IV48 349 aaKnown RBP12.92□□□□□ -0.34
LIMS2-206ENST00000409754 NFAM1Q8NET5 270 aaPredicted RBP12.92□□□□□ -0.34
LIMS2-206ENST00000409754 PFN4Q8NHR9 129 aa12.92□□□□□ -0.34
LIMS2-206ENST00000409754 BRIX1Q8TDN6 353 aaKnown RBP12.92□□□□□ -0.34
LIMS2-206ENST00000409754 LRFN5Q96NI6 719 aa12.92□□□□□ -0.34
LIMS2-206ENST00000409754 SLC38A2Q96QD8 506 aa12.92□□□□□ -0.34
LIMS2-206ENST00000409754 ADOQ96SZ5 270 aa12.92□□□□□ -0.34
LIMS2-206ENST00000409754 SPSB2Q99619 263 aa12.92□□□□□ -0.34
LIMS2-206ENST00000409754 CTRCQ99895 268 aa12.92□□□□□ -0.34
LIMS2-206ENST00000409754 TSSK6Q9BXA6 273 aa12.92□□□□□ -0.34
LIMS2-206ENST00000409754 C20orf141Q9NUB4 165 aa12.92□□□□□ -0.34
LIMS2-206ENST00000409754 SELENONQ9NZV5 590 aa12.92□□□□□ -0.34
LIMS2-206ENST00000409754 RPL36Q9Y3U8 105 aaKnown RBP12.92□□□□□ -0.34
LIMS2-206ENST00000409754 LAMA5O15230 3695 aa12.92□□□□□ -0.34
LIMS2-206ENST00000409754 IGHV3-20A0A0C4DH32 117 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 H3BMQ9 156 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 CNOT3O75175 753 aaKnown RBP12.91□□□□□ -0.34
LIMS2-206ENST00000409754 TRMUO75648 421 aaKnown RBP12.91□□□□□ -0.34
LIMS2-206ENST00000409754 STSP08842 583 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 UBL4AP11441 157 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 MAKP20794 623 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 CCKBRP32239 447 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 FOXL2P58012 376 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 COPZ1P61923 177 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 PLCXD2Q0VAA5 305 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 LSAMPQ13449 338 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 IRF3Q14653 427 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 CD226Q15762 336 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 PGGHGQ32M88 737 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 NDUFAF6Q330K2 333 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 LCN10Q6JVE6 187 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 RPL13AP3Q6NVV1 102 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 PRR22Q8IZ63 422 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 CACTIN-AS1Q8N1I8 211 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 CADM2Q8N3J6 435 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 C9orf43Q8TAL5 461 aaPredicted RBP12.91□□□□□ -0.34
LIMS2-206ENST00000409754 TMEM163Q8TC26 289 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 RAB2BQ8WUD1 216 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 DNAJA4Q8WW22 397 aaPredicted RBP12.91□□□□□ -0.34
LIMS2-206ENST00000409754 TP53INP1Q96A56 240 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 BPIFA2Q96DR5 249 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 ARSGQ96EG1 525 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 COG8Q96MW5 612 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 CCNL2Q96S94 520 aaPredicted RBP12.91□□□□□ -0.34
LIMS2-206ENST00000409754 DPH1Q9BZG8 443 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 NRSN2Q9GZP1 204 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 DNAJC27Q9NZQ0 273 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 NXT1Q9UKK6 140 aaKnown RBP12.91□□□□□ -0.34
LIMS2-206ENST00000409754 A0A1W2PQD3 144 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 TRIM64BA6NI03 449 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 B4E171 279 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 ZNF264O43296 627 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 ICOSLGO75144 302 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 CDK4P11802 303 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 PTNP21246 168 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 TSPAN7P41732 249 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 ST13P50502 369 aaKnown RBP12.91□□□□□ -0.34
LIMS2-206ENST00000409754 PNLIPRP2P54317 469 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 RNF4P78317 190 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 SKP2Q13309 424 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 SYT14P1Q58G82 188 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 PLAG1Q6DJT9 500 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 TMEM205Q6UW68 189 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 APOOLQ6UXV4 268 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 ANKRD13BQ86YJ7 626 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 CYP4Z2PQ8N1L4 340 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 APCDD1LQ8NCL9 501 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 OR2T33Q8NG76 320 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 OR4Q3Q8NH05 313 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 PHOSPHO1Q8TCT1 267 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 PMEPA1Q969W9 287 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 OMA1Q96E52 524 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 CRB3Q9BUF7 120 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 CDCA4Q9BXL8 241 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 NAA50Q9GZZ1 169 aaKnown RBP12.91□□□□□ -0.34
LIMS2-206ENST00000409754 WDR54Q9H977 334 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 ATP13A2Q9NQ11 1180 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 MEPEQ9NQ76 525 aaPredicted RBP12.91□□□□□ -0.34
LIMS2-206ENST00000409754 MED17Q9NVC6 651 aa12.91□□□□□ -0.34
LIMS2-206ENST00000409754 C19orf25Q9UFG5 118 aaPredicted RBP12.91□□□□□ -0.34
LIMS2-206ENST00000409754 WARS2Q9UGM6 360 aaKnown RBP12.91□□□□□ -0.34
LIMS2-206ENST00000409754 APC2O95996 2303 aa12.9□□□□□ -0.34
LIMS2-206ENST00000409754 CDC14CA4D256 554 aa12.9□□□□□ -0.34
LIMS2-206ENST00000409754 GTPBP1O00178 669 aaKnown RBP12.9□□□□□ -0.34
LIMS2-206ENST00000409754 KPNA4O00629 521 aaPredicted RBP12.9□□□□□ -0.34
LIMS2-206ENST00000409754 AHCYL1O43865 530 aa12.9□□□□□ -0.34
LIMS2-206ENST00000409754 RCBTB2O95199 551 aa12.9□□□□□ -0.34
LIMS2-206ENST00000409754 HMGN1P05114 100 aa12.9□□□□□ -0.34
LIMS2-206ENST00000409754 CCL4P13236 92 aa12.9□□□□□ -0.34
LIMS2-206ENST00000409754 ENDOUP21128 410 aaKnown RBP12.9□□□□□ -0.34
LIMS2-206ENST00000409754 PSMB9P28065 219 aa12.9□□□□□ -0.34
LIMS2-206ENST00000409754 ABCD3P28288 659 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms