RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 KITLGP21583 273 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 MKXQ8IYA7 352 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 C1orf74Q96LT6 269 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 MTHFD2LQ9H903 347 aaPredicted RBP7.88□□□□□ -1.15
SCN9A-203ENST00000409672 PLCXD1Q9NUJ7 323 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 MEX3AA1L020 520 aaKnown RBP7.88□□□□□ -1.15
SCN9A-203ENST00000409672 ADAM12O43184 909 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 IFNA10P01566 189 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 HOXB6P17509 224 aaKnown RBP7.88□□□□□ -1.15
SCN9A-203ENST00000409672 C6orf136Q5SQH8 315 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 AGAP7PQ5VUJ5 663 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 AGAP6Q5VW22 663 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 KDM8Q8N371 416 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 SECTM1Q8WVN6 248 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 HRASLS5Q96KN8 279 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 AGAP4Q96P64 663 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 SYT3Q9BQG1 590 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 NTPCRQ9BSD7 190 aaKnown RBP7.88□□□□□ -1.15
SCN9A-203ENST00000409672 SARGQ9BW04 601 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 GHRLQ9UBU3 117 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 KNTC1P50748 2209 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 UBFD1O14562 309 aaKnown RBP7.88□□□□□ -1.15
SCN9A-203ENST00000409672 MT-CO2P00403 227 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 CD1DP15813 335 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 CDK2P24941 298 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 IDUAP35475 653 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 EIF2DP41214 584 aaKnown RBP7.88□□□□□ -1.15
SCN9A-203ENST00000409672 RAB33AQ14088 237 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 PLEKHN1Q494U1 663 aaPredicted RBP7.88□□□□□ -1.15
SCN9A-203ENST00000409672 CDCA2Q69YH5 1023 aaPredicted RBP7.88□□□□□ -1.15
SCN9A-203ENST00000409672 C3P1Q6ZMU1 363 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 ZNF440Q8IYI8 595 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 SFXN5Q8TD22 340 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 RAB2BQ8WUD1 216 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 NRSN2Q9GZP1 204 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 INIPQ9NRY2 104 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 PADI1Q9ULC6 663 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 SCML1Q9UN30 329 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 B3GNT3Q9Y2A9 372 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 NOVA1P51513 510 aaKnown RBP7.88□□□□□ -1.15
SCN9A-203ENST00000409672 SFT2D3Q587I9 215 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 NDUFAF7Q7L592 441 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 LINC00346Q8IVM7 164 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 IMP4Q96G21 291 aaKnown RBP7.88□□□□□ -1.15
SCN9A-203ENST00000409672 EDEM2Q9BV94 578 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 KCND1Q9NSA2 647 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 MUTYHQ9UIF7 546 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 B3GALT4O96024 378 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 GJA4P35212 333 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 ELP2Q6IA86 826 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 CAMKMTQ7Z624 323 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 SGPP2Q8IWX5 399 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 ZNF679Q8IYX0 411 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 C8orf44Q96CB5 159 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 SLC2A11Q9BYW1 496 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 SIX2Q9NPC8 291 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 FSCN3Q9NQT6 498 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 GDE1Q9NZC3 331 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 DNAJC13O75165 2243 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 FAM159BA6NKW6 160 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 SLC43A1O75387 559 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 SLC34A2O95436 690 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 LAMP1P11279 417 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 HLA-DMAP28067 261 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 OR7E24Q6IFN5 339 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 UGT2A3Q6UWM9 527 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 XKR5Q6UX68 686 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 AAED1Q7RTV5 226 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 OR4A16Q8NH70 328 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 C9orf43Q8TAL5 461 aaPredicted RBP7.88□□□□□ -1.15
SCN9A-203ENST00000409672 FAM174AQ8TBP5 190 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 MS4A4EQ96PG1 132 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 TIMM29Q9BSF4 260 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 TEX10Q9NXF1 929 aaPredicted RBP7.88□□□□□ -1.15
SCN9A-203ENST00000409672 MRPS2Q9Y399 296 aaKnown RBP7.88□□□□□ -1.15
SCN9A-203ENST00000409672 TMEM14AQ9Y6G1 99 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 AKAP12Q02952 1782 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 NCR1O76036 304 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 ABHD16AO95870 558 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 ARSBP15848 533 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 C19orf47Q8N9M1 422 aaKnown RBP7.88□□□□□ -1.15
SCN9A-203ENST00000409672 OR8J2Q8NGG1 315 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 OR52N5Q8NH56 324 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 ASB9Q96DX5 294 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 FAM173AQ9BQD7 235 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 ARL6Q9H0F7 186 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 RAB9BQ9NP90 201 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 PCDHGB6Q9Y5F9 930 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 H3BSA7 217 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 HSD17B7P56937 341 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 OR2B11Q5JQS5 317 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 OR5D14Q8NGL3 314 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 SYNPRQ8TBG9 265 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 APMAPQ9HDC9 416 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 FAAHO00519 579 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 DNASE1P24855 282 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 CNPY1Q3B7I2 92 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 CLEC14AQ86T13 490 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 MARVELD2Q8N4S9 558 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 NPWQ8N729 165 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms