RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 PABPC4LP0CB38 370 aaKnown RBP10.51□□□□□ -0.73
SNX13-202ENST00000409604 CD46P15529 392 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 MYL9P24844 172 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 EPHA2P29317 976 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 STT3AP46977 705 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 EMDP50402 254 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 SNU13P55769 128 aaKnown RBP10.51□□□□□ -0.73
SNX13-202ENST00000409604 RNF4P78317 190 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 CWF19L1Q69YN2 538 aaKnown RBP10.51□□□□□ -0.73
SNX13-202ENST00000409604 ULK3Q6PHR2 472 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 KRT74Q7RTS7 529 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 P2RY8Q86VZ1 359 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 ZNF283Q8N7M2 679 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 OR10G3Q8NGC4 313 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 ZFP3Q96NJ6 502 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 SAP130Q9H0E3 1048 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 C14orf105Q9NVL8 296 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 CD300AQ9UGN4 299 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 RSL24D1Q9UHA3 163 aaKnown RBP10.51□□□□□ -0.73
SNX13-202ENST00000409604 POU2F3Q9UKI9 436 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 MMACHCQ9Y4U1 282 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 PATJQ8NI35 1801 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 IGHV3-64DA0A0J9YX35 117 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 F5H5K5 113 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 H0YIG0 161 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 PSMB10P40306 273 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 CBFBQ13951 182 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 ZCCHC12Q6PEW1 402 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 OR4D9Q8NGE8 314 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 MCFD2Q8NI22 146 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 BRIX1Q8TDN6 353 aaKnown RBP10.51□□□□□ -0.73
SNX13-202ENST00000409604 PRRC1Q96M27 445 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 TIMMDC1Q9NPL8 285 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 DDX28Q9NUL7 540 aaKnown RBP10.51□□□□□ -0.73
SNX13-202ENST00000409604 SUSD5O60279 629 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 LCKP06239 509 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 VBP1P61758 197 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 TXNL4AP83876 142 aaKnown RBP10.5□□□□□ -0.73
SNX13-202ENST00000409604 HSF2Q03933 536 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 TAB1Q15750 504 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 MAPK14Q16539 360 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 SWT1Q5T5J6 900 aaKnown RBP10.5□□□□□ -0.73
SNX13-202ENST00000409604 CBLN3Q6UW01 205 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 ZAR1Q86SH2 424 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 LACC1Q8IV20 430 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 CCDC103Q8IW40 242 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 ACOT11Q8WXI4 607 aaPredicted RBP10.5□□□□□ -0.73
SNX13-202ENST00000409604 POP5Q969H6 163 aaKnown RBP10.5□□□□□ -0.73
SNX13-202ENST00000409604 FER1L6-AS2Q96M78 137 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 C19orf43Q9BQ61 176 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 HOXD1Q9GZZ0 328 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 FBXL4Q9UKA2 621 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 NYNRINQ9P2P1 1898 aaKnown RBP10.5□□□□□ -0.73
SNX13-202ENST00000409604 ZC3H12DA2A288 527 aaKnown RBP10.5□□□□□ -0.73
SNX13-202ENST00000409604 FOXS1O43638 330 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 HOXC4P09017 264 aaPredicted RBP10.5□□□□□ -0.73
SNX13-202ENST00000409604 FTH1P19P0C7X4 201 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 SOX3P41225 446 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 PPP2R2BQ00005 443 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 DGAT2L6Q6ZPD8 337 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 PRICKLE2Q7Z3G6 844 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 JAGN1Q8N5M9 183 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 OR4F15Q8NGB8 312 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 HS6ST2Q96MM7 605 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 TAAR9Q96RI9 348 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 MENTQ9BUN1 341 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 LHX9Q9NQ69 397 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 FBXO4Q9UKT5 387 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 TMEM5Q9Y2B1 443 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 GPR55Q9Y2T6 319 aaPredicted RBP10.5□□□□□ -0.73
SNX13-202ENST00000409604 ADAM18Q9Y3Q7 739 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 ANKRD36A6QL64 1941 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 DOCK4Q8N1I0 1966 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 J3QRK9 145 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 SLC30A4O14863 429 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 CD79AP11912 226 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 TIMM50Q3ZCQ8 353 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 TP53I3Q53FA7 332 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 ARMC4Q5T2S8 1044 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 ZNF585AQ6P3V2 769 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 OR5M9Q8NGP3 310 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 TMIGD2Q96BF3 282 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 NXT1Q9UKK6 140 aaKnown RBP10.5□□□□□ -0.73
SNX13-202ENST00000409604 DTX4Q9Y2E6 619 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 TRIOO75962 3097 aa10.5□□□□□ -0.73
SNX13-202ENST00000409604 TEX13CA0A0J9YWL9 993 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 SH3PXD2BA1X283 911 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 ANKRD28O15084 1053 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 MAGEB4O15481 346 aaPredicted RBP10.49□□□□□ -0.73
SNX13-202ENST00000409604 ENTPD6O75354 484 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 TRHRP34981 398 aaPredicted RBP10.49□□□□□ -0.73
SNX13-202ENST00000409604 DGUOKQ16854 277 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 PDSS1Q5T2R2 415 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 IDNKQ5T6J7 187 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 SPINK14Q6IE38 97 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 GDF7Q7Z4P5 450 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 LRRC17Q8N6Y2 441 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 SFXN5Q8TD22 340 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 CLDN23Q96B33 292 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 TSSK2Q96PF2 358 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms