RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 HNRNPCL4P0DMR1 293 aa14.34□□□□□ -0.11
LIMS2-205ENST00000409455 RAP2BP61225 183 aa14.34□□□□□ -0.11
LIMS2-205ENST00000409455 EIF2B5Q13144 721 aaKnown RBP14.34□□□□□ -0.11
LIMS2-205ENST00000409455 HTR4Q13639 388 aa14.34□□□□□ -0.11
LIMS2-205ENST00000409455 ELAVL3Q14576 367 aaKnown RBP14.34□□□□□ -0.11
LIMS2-205ENST00000409455 ESPNLQ6ZVH7 1005 aa14.34□□□□□ -0.11
LIMS2-205ENST00000409455 DPPA4Q7L190 304 aa14.34□□□□□ -0.11
LIMS2-205ENST00000409455 PRSS45Q7RTY3 260 aa14.34□□□□□ -0.11
LIMS2-205ENST00000409455 NRMQ8IXM6 262 aa14.34□□□□□ -0.11
LIMS2-205ENST00000409455 SLC44A3Q8N4M1 653 aa14.34□□□□□ -0.11
LIMS2-205ENST00000409455 SPICQ8N5J4 248 aa14.34□□□□□ -0.11
LIMS2-205ENST00000409455 MEIOBQ8N635 442 aa14.34□□□□□ -0.11
LIMS2-205ENST00000409455 BVESQ8NE79 360 aa14.34□□□□□ -0.11
LIMS2-205ENST00000409455 KLK6Q92876 244 aa14.34□□□□□ -0.11
LIMS2-205ENST00000409455 TIMP4Q99727 224 aa14.34□□□□□ -0.11
LIMS2-205ENST00000409455 YIPF4Q9BSR8 244 aa14.34□□□□□ -0.11
LIMS2-205ENST00000409455 RCE1Q9Y256 329 aa14.34□□□□□ -0.11
LIMS2-205ENST00000409455 OR6C65A6NJZ3 312 aa14.33□□□□□ -0.12
LIMS2-205ENST00000409455 AIPO00170 330 aa14.33□□□□□ -0.12
LIMS2-205ENST00000409455 SYT5O00445 386 aa14.33□□□□□ -0.12
LIMS2-205ENST00000409455 HYAL3O43820 417 aaPredicted RBP14.33□□□□□ -0.12
LIMS2-205ENST00000409455 CPN1P15169 458 aa14.33□□□□□ -0.12
LIMS2-205ENST00000409455 MAZP56270 477 aaKnown RBP14.33□□□□□ -0.12
LIMS2-205ENST00000409455 MLC1Q15049 377 aa14.33□□□□□ -0.12
LIMS2-205ENST00000409455 ACSM3Q53FZ2 586 aa14.33□□□□□ -0.12
LIMS2-205ENST00000409455 SLC25A25Q6KCM7 469 aa14.33□□□□□ -0.12
LIMS2-205ENST00000409455 NIPAL3Q6P499 406 aa14.33□□□□□ -0.12
LIMS2-205ENST00000409455 MEPCEQ7L2J0 689 aaKnown RBP14.33□□□□□ -0.12
LIMS2-205ENST00000409455 ADCK2Q7Z695 626 aa14.33□□□□□ -0.12
LIMS2-205ENST00000409455 NUDT13Q86X67 352 aa14.33□□□□□ -0.12
LIMS2-205ENST00000409455 TMIEQ8NEW7 156 aa14.33□□□□□ -0.12
LIMS2-205ENST00000409455 OR4D9Q8NGE8 314 aa14.33□□□□□ -0.12
LIMS2-205ENST00000409455 ARRDC3Q96B67 414 aa14.33□□□□□ -0.12
LIMS2-205ENST00000409455 RGMAQ96B86 450 aa14.33□□□□□ -0.12
LIMS2-205ENST00000409455 TRMT61BQ9BVS5 477 aaKnown RBP14.33□□□□□ -0.12
LIMS2-205ENST00000409455 INPP5EQ9NRR6 644 aa14.33□□□□□ -0.12
LIMS2-205ENST00000409455 MRPL15Q9P015 296 aaKnown RBP14.33□□□□□ -0.12
LIMS2-205ENST00000409455 ZNF69Q9UC07 566 aa14.33□□□□□ -0.12
LIMS2-205ENST00000409455 A0A0B4J203 849 aa14.33□□□□□ -0.12
LIMS2-205ENST00000409455 E9PI62 339 aa14.33□□□□□ -0.12
LIMS2-205ENST00000409455 ELFN1P0C7U0 828 aa14.33□□□□□ -0.12
LIMS2-205ENST00000409455 ATF1P18846 271 aa14.33□□□□□ -0.12
LIMS2-205ENST00000409455 POU3F2P20265 443 aaPredicted RBP14.33□□□□□ -0.12
LIMS2-205ENST00000409455 LTBRP36941 435 aa14.33□□□□□ -0.12
LIMS2-205ENST00000409455 AP3S2P59780 193 aa14.33□□□□□ -0.12
LIMS2-205ENST00000409455 E2F1Q01094 437 aa14.33□□□□□ -0.12
LIMS2-205ENST00000409455 FUT5Q11128 374 aa14.33□□□□□ -0.12
LIMS2-205ENST00000409455 ZNF169Q14929 603 aaPredicted RBP14.33□□□□□ -0.12
LIMS2-205ENST00000409455 MAPK14Q16539 360 aa14.33□□□□□ -0.12
LIMS2-205ENST00000409455 CLVS2Q5SYC1 327 aa14.33□□□□□ -0.12
LIMS2-205ENST00000409455 TTLQ8NG68 377 aa14.33□□□□□ -0.12
LIMS2-205ENST00000409455 SETD7Q8WTS6 366 aaKnown RBP14.33□□□□□ -0.12
LIMS2-205ENST00000409455 SUSD6Q92537 303 aa14.33□□□□□ -0.12
LIMS2-205ENST00000409455 SAMD8Q96LT4 415 aa14.33□□□□□ -0.12
LIMS2-205ENST00000409455 SMAD5Q99717 465 aaKnown RBP14.33□□□□□ -0.12
LIMS2-205ENST00000409455 TMPRSS13Q9BYE2 586 aa14.33□□□□□ -0.12
LIMS2-205ENST00000409455 GLIPR2Q9H4G4 154 aa14.33□□□□□ -0.12
LIMS2-205ENST00000409455 CA5BQ9Y2D0 317 aa14.33□□□□□ -0.12
LIMS2-205ENST00000409455 ZC3H12DA2A288 527 aaKnown RBP14.32□□□□□ -0.12
LIMS2-205ENST00000409455 MCRIP1C9JLW8 97 aa14.32□□□□□ -0.12
LIMS2-205ENST00000409455 ARPC1BO15143 372 aaKnown RBP14.32□□□□□ -0.12
LIMS2-205ENST00000409455 SPINT1O43278 529 aa14.32□□□□□ -0.12
LIMS2-205ENST00000409455 GMDSO60547 372 aa14.32□□□□□ -0.12
LIMS2-205ENST00000409455 ECDO95905 644 aaPredicted RBP14.32□□□□□ -0.12
LIMS2-205ENST00000409455 S100A11P31949 105 aa14.32□□□□□ -0.12
LIMS2-205ENST00000409455 ACVR1BP36896 505 aa14.32□□□□□ -0.12
LIMS2-205ENST00000409455 CCR9P51686 369 aa14.32□□□□□ -0.12
LIMS2-205ENST00000409455 PSMA6P60900 246 aaKnown RBP14.32□□□□□ -0.12
LIMS2-205ENST00000409455 LASP1Q14847 261 aaKnown RBP14.32□□□□□ -0.12
LIMS2-205ENST00000409455 DECR1Q16698 335 aa14.32□□□□□ -0.12
LIMS2-205ENST00000409455 SFRP5Q5T4F7 317 aa14.32□□□□□ -0.12
LIMS2-205ENST00000409455 B3GNTL1Q67FW5 361 aaPredicted RBP14.32□□□□□ -0.12
LIMS2-205ENST00000409455 LINGO2Q7L985 606 aa14.32□□□□□ -0.12
LIMS2-205ENST00000409455 TRMT11Q7Z4G4 463 aaKnown RBP14.32□□□□□ -0.12
LIMS2-205ENST00000409455 HSD17B13Q7Z5P4 300 aaPredicted RBP14.32□□□□□ -0.12
LIMS2-205ENST00000409455 FAM129CQ86XR2 697 aa14.32□□□□□ -0.12
LIMS2-205ENST00000409455 NKAIN4Q8IVV8 208 aa14.32□□□□□ -0.12
LIMS2-205ENST00000409455 ANKRD53Q8N9V6 530 aa14.32□□□□□ -0.12
LIMS2-205ENST00000409455 C17orf47Q8NEP4 570 aa14.32□□□□□ -0.12
LIMS2-205ENST00000409455 CNOT9Q92600 299 aaKnown RBP14.32□□□□□ -0.12
LIMS2-205ENST00000409455 ZNF764Q96H86 408 aaPredicted RBP14.32□□□□□ -0.12
LIMS2-205ENST00000409455 AMDHD1Q96NU7 426 aa14.32□□□□□ -0.12
LIMS2-205ENST00000409455 MS4A8Q9BY19 250 aa14.32□□□□□ -0.12
LIMS2-205ENST00000409455 NANSQ9NR45 359 aa14.32□□□□□ -0.12
LIMS2-205ENST00000409455 CA10Q9NS85 328 aa14.32□□□□□ -0.12
LIMS2-205ENST00000409455 PIPOXQ9P0Z9 390 aa14.32□□□□□ -0.12
LIMS2-205ENST00000409455 THAP10Q9P2Z0 257 aaPredicted RBP14.32□□□□□ -0.12
LIMS2-205ENST00000409455 PLXNA2O75051 1894 aa14.32□□□□□ -0.12
LIMS2-205ENST00000409455 TCF20Q9UGU0 1960 aaKnown RBP14.32□□□□□ -0.12
LIMS2-205ENST00000409455 TCRBV16S1A1N1A0A5B0 115 aa14.32□□□□□ -0.12
LIMS2-205ENST00000409455 NAP1L6A6NFF2 107 aa14.32□□□□□ -0.12
LIMS2-205ENST00000409455 FLRT2O43155 660 aa14.32□□□□□ -0.12
LIMS2-205ENST00000409455 CREBL2O60519 120 aaPredicted RBP14.32□□□□□ -0.12
LIMS2-205ENST00000409455 SC5DO75845 299 aa14.32□□□□□ -0.12
LIMS2-205ENST00000409455 LDOC1O95751 146 aaPredicted RBP14.32□□□□□ -0.12
LIMS2-205ENST00000409455 TBX6O95947 436 aaPredicted RBP14.32□□□□□ -0.12
LIMS2-205ENST00000409455 EPXP11678 715 aa14.32□□□□□ -0.12
LIMS2-205ENST00000409455 ATP5A1P25705 553 aaKnown RBP14.32□□□□□ -0.12
LIMS2-205ENST00000409455 NCBP2P52298 156 aaKnown RBP eCLIP14.32□□□□□ -0.12
LIMS2-205ENST00000409455 GPR68Q15743 365 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms