RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 POLE3Q9NRF9 147 aa13.69□□□□□ -0.22
TPM1-207ENST00000403994 MARCOQ9UEW3 520 aaPredicted RBP13.69□□□□□ -0.22
TPM1-207ENST00000403994 WDR45Q9Y484 360 aa13.69□□□□□ -0.22
TPM1-207ENST00000403994 IGHV3-15A0A0B4J1V0 119 aa13.68□□□□□ -0.22
TPM1-207ENST00000403994 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.68□□□□□ -0.22
TPM1-207ENST00000403994 A0A1W2PNR3 127 aa13.68□□□□□ -0.22
TPM1-207ENST00000403994 GCM2O75603 506 aaPredicted RBP13.68□□□□□ -0.22
TPM1-207ENST00000403994 C1QCP02747 245 aa13.68□□□□□ -0.22
TPM1-207ENST00000403994 GUSBP08236 651 aa13.68□□□□□ -0.22
TPM1-207ENST00000403994 PSMB1P20618 241 aaKnown RBP13.68□□□□□ -0.22
TPM1-207ENST00000403994 IL12AP29459 219 aa13.68□□□□□ -0.22
TPM1-207ENST00000403994 S100A3P33764 101 aa13.68□□□□□ -0.22
TPM1-207ENST00000403994 CHI3L1P36222 383 aaPredicted RBP13.68□□□□□ -0.22
TPM1-207ENST00000403994 UFM1P61960 85 aa13.68□□□□□ -0.22
TPM1-207ENST00000403994 HPCAP84074 193 aa13.68□□□□□ -0.22
TPM1-207ENST00000403994 PLAURQ03405 335 aa13.68□□□□□ -0.22
TPM1-207ENST00000403994 TIGD2Q4W5G0 525 aa13.68□□□□□ -0.22
TPM1-207ENST00000403994 BEX5Q5H9J7 111 aa13.68□□□□□ -0.22
TPM1-207ENST00000403994 TMEM201Q5SNT2 666 aa13.68□□□□□ -0.22
TPM1-207ENST00000403994 NUFIP2Q7Z417 695 aaKnown RBP13.68□□□□□ -0.22
TPM1-207ENST00000403994 TUSC5Q8IXB3 177 aa13.68□□□□□ -0.22
TPM1-207ENST00000403994 MGARPQ8TDB4 240 aa13.68□□□□□ -0.22
TPM1-207ENST00000403994 XAGE5Q8WWM1 108 aa13.68□□□□□ -0.22
TPM1-207ENST00000403994 ROPN1LQ96C74 230 aa13.68□□□□□ -0.22
TPM1-207ENST00000403994 CCL19Q99731 98 aa13.68□□□□□ -0.22
TPM1-207ENST00000403994 SAP130Q9H0E3 1048 aa13.68□□□□□ -0.22
TPM1-207ENST00000403994 GP6Q9HCN6 339 aa13.68□□□□□ -0.22
TPM1-207ENST00000403994 FANCFQ9NPI8 374 aa13.68□□□□□ -0.22
TPM1-207ENST00000403994 BTNL2Q9UIR0 455 aa13.68□□□□□ -0.22
TPM1-207ENST00000403994 GOLGA8QA0A0J9YX86 632 aa13.67□□□□□ -0.22
TPM1-207ENST00000403994 GOLGA8OA6NCC3 632 aa13.67□□□□□ -0.22
TPM1-207ENST00000403994 GOLGA8NF8WBI6 632 aa13.67□□□□□ -0.22
TPM1-207ENST00000403994 HMGN4O00479 90 aa13.67□□□□□ -0.22
TPM1-207ENST00000403994 SMAD9O15198 467 aaKnown RBP13.67□□□□□ -0.22
TPM1-207ENST00000403994 HDAC3O15379 428 aa13.67□□□□□ -0.22
TPM1-207ENST00000403994 KLF4O43474 513 aa13.67□□□□□ -0.22
TPM1-207ENST00000403994 ENPP1P22413 925 aa13.67□□□□□ -0.22
TPM1-207ENST00000403994 EPHA3P29320 983 aa13.67□□□□□ -0.22
TPM1-207ENST00000403994 PGM1P36871 562 aa13.67□□□□□ -0.22
TPM1-207ENST00000403994 SESN3P58005 492 aa13.67□□□□□ -0.22
TPM1-207ENST00000403994 RAC3P60763 192 aa13.67□□□□□ -0.22
TPM1-207ENST00000403994 NKX6-1P78426 367 aaPredicted RBP13.67□□□□□ -0.22
TPM1-207ENST00000403994 MERTKQ12866 999 aa13.67□□□□□ -0.22
TPM1-207ENST00000403994 ACKR1Q16570 336 aa13.67□□□□□ -0.22
TPM1-207ENST00000403994 Q5PR19 223 aa13.67□□□□□ -0.22
TPM1-207ENST00000403994 C20orf204Q6ZNR8 217 aa13.67□□□□□ -0.22
TPM1-207ENST00000403994 HMGN2P46Q86SG4 172 aa13.67□□□□□ -0.22
TPM1-207ENST00000403994 RNF130Q86XS8 419 aa13.67□□□□□ -0.22
TPM1-207ENST00000403994 GABRG1Q8N1C3 465 aa13.67□□□□□ -0.22
TPM1-207ENST00000403994 ZNF619Q8N2I2 560 aa13.67□□□□□ -0.22
TPM1-207ENST00000403994 OR5B2Q96R09 309 aa13.67□□□□□ -0.22
TPM1-207ENST00000403994 PIP5K1AQ99755 562 aa13.67□□□□□ -0.22
TPM1-207ENST00000403994 PSD2Q9BQI7 771 aa13.67□□□□□ -0.22
TPM1-207ENST00000403994 OR10A4Q9H209 315 aa13.67□□□□□ -0.22
TPM1-207ENST00000403994 WDR55Q9H6Y2 383 aaPredicted RBP13.67□□□□□ -0.22
TPM1-207ENST00000403994 THAP1Q9NVV9 213 aa13.67□□□□□ -0.22
TPM1-207ENST00000403994 ING1Q9UK53 422 aaPredicted RBP13.67□□□□□ -0.22
TPM1-207ENST00000403994 SLC35A3Q9Y2D2 325 aa13.67□□□□□ -0.22
TPM1-207ENST00000403994 PRAMEF27A3QJZ7 478 aa13.66□□□□□ -0.22
TPM1-207ENST00000403994 TRPC5OSA6NMA1 111 aa13.66□□□□□ -0.22
TPM1-207ENST00000403994 SMPD2O60906 423 aa13.66□□□□□ -0.22
TPM1-207ENST00000403994 PRKD3O94806 890 aa13.66□□□□□ -0.22
TPM1-207ENST00000403994 PGRP06401 933 aa13.66□□□□□ -0.22
TPM1-207ENST00000403994 FOSL1P15407 271 aa13.66□□□□□ -0.22
TPM1-207ENST00000403994 PGCP20142 388 aa13.66□□□□□ -0.22
TPM1-207ENST00000403994 FPR1P21462 350 aa13.66□□□□□ -0.22
TPM1-207ENST00000403994 CDKN2CP42773 168 aa13.66□□□□□ -0.22
TPM1-207ENST00000403994 SYT14P1Q58G82 188 aa13.66□□□□□ -0.22
TPM1-207ENST00000403994 AP1ARQ63HQ0 302 aa13.66□□□□□ -0.22
TPM1-207ENST00000403994 ABLIM2Q6H8Q1 611 aa13.66□□□□□ -0.22
TPM1-207ENST00000403994 ZNF704Q6ZNC4 412 aaPredicted RBP13.66□□□□□ -0.22
TPM1-207ENST00000403994 PLEKHM3Q6ZWE6 761 aa13.66□□□□□ -0.22
TPM1-207ENST00000403994 SPATA19Q7Z5L4 167 aa13.66□□□□□ -0.22
TPM1-207ENST00000403994 WFDC8Q8IUA0 241 aa13.66□□□□□ -0.22
TPM1-207ENST00000403994 SLC43A2Q8N370 569 aa13.66□□□□□ -0.22
TPM1-207ENST00000403994 SLC25A43Q8WUT9 341 aaPredicted RBP13.66□□□□□ -0.22
TPM1-207ENST00000403994 TMEM234Q8WY98 164 aa13.66□□□□□ -0.22
TPM1-207ENST00000403994 PIGTQ969N2 578 aa13.66□□□□□ -0.22
TPM1-207ENST00000403994 S100PBPQ96BU1 408 aa13.66□□□□□ -0.22
TPM1-207ENST00000403994 PANX1Q96RD7 426 aa13.66□□□□□ -0.22
TPM1-207ENST00000403994 TACO1Q9BSH4 297 aaKnown RBP13.66□□□□□ -0.22
TPM1-207ENST00000403994 INPP5KQ9BT40 448 aa13.66□□□□□ -0.22
TPM1-207ENST00000403994 BCO1Q9HAY6 547 aa13.66□□□□□ -0.22
TPM1-207ENST00000403994 ACER3Q9NUN7 267 aa13.66□□□□□ -0.22
TPM1-207ENST00000403994 KLHL9Q9P2J3 617 aa13.66□□□□□ -0.22
TPM1-207ENST00000403994 GPR52Q9Y2T5 361 aa13.66□□□□□ -0.22
TPM1-207ENST00000403994 GPR45Q9Y5Y3 372 aa13.66□□□□□ -0.22
TPM1-207ENST00000403994 CCDC154A6NI56 674 aa13.65□□□□□ -0.22
TPM1-207ENST00000403994 CLDN24A6NM45 220 aa13.65□□□□□ -0.22
TPM1-207ENST00000403994 CYTIPO60759 359 aa13.65□□□□□ -0.22
TPM1-207ENST00000403994 FESP07332 822 aa13.65□□□□□ -0.22
TPM1-207ENST00000403994 YES1P07947 543 aa13.65□□□□□ -0.22
TPM1-207ENST00000403994 CHRM4P08173 479 aa13.65□□□□□ -0.22
TPM1-207ENST00000403994 KITP10721 976 aa13.65□□□□□ -0.22
TPM1-207ENST00000403994 DIO1P49895 249 aa13.65□□□□□ -0.22
TPM1-207ENST00000403994 NR1H2P55055 460 aa13.65□□□□□ -0.22
TPM1-207ENST00000403994 MAGOHP61326 146 aaKnown RBP13.65□□□□□ -0.22
TPM1-207ENST00000403994 TSC22D1Q15714 1073 aa13.65□□□□□ -0.22
TPM1-207ENST00000403994 GPAT3Q53EU6 434 aa13.65□□□□□ -0.22
TPM1-207ENST00000403994 SHEQ5VZ18 495 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms