RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 RAD21L1Q9H4I0 556 aa12.64□□□□□ -0.39
HLA-DQB1-202ENST00000399079 RNF122Q9H9V4 155 aa12.64□□□□□ -0.39
HLA-DQB1-202ENST00000399079 THUMPD1Q9NXG2 353 aaKnown RBP12.64□□□□□ -0.39
HLA-DQB1-202ENST00000399079 CALML5Q9NZT1 146 aa12.64□□□□□ -0.39
HLA-DQB1-202ENST00000399079 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.64□□□□□ -0.39
HLA-DQB1-202ENST00000399079 LEF1Q9UJU2 399 aaPredicted RBP12.64□□□□□ -0.39
HLA-DQB1-202ENST00000399079 ZNF175Q9Y473 711 aa12.64□□□□□ -0.39
HLA-DQB1-202ENST00000399079 APCP25054 2843 aa12.64□□□□□ -0.39
HLA-DQB1-202ENST00000399079 TACC2O95359 2948 aa12.64□□□□□ -0.39
HLA-DQB1-202ENST00000399079 A0A1W2PNV4 684 aa12.63□□□□□ -0.39
HLA-DQB1-202ENST00000399079 TMEM247A6NEH6 219 aa12.63□□□□□ -0.39
HLA-DQB1-202ENST00000399079 SYT5O00445 386 aa12.63□□□□□ -0.39
HLA-DQB1-202ENST00000399079 DBIP07108 87 aaKnown RBP12.63□□□□□ -0.39
HLA-DQB1-202ENST00000399079 BMP2P12643 396 aa12.63□□□□□ -0.39
HLA-DQB1-202ENST00000399079 ASCL1P50553 236 aa12.63□□□□□ -0.39
HLA-DQB1-202ENST00000399079 SIRPAP78324 504 aa12.63□□□□□ -0.39
HLA-DQB1-202ENST00000399079 MERTKQ12866 999 aa12.63□□□□□ -0.39
HLA-DQB1-202ENST00000399079 ZNF836Q6ZNA1 936 aa12.63□□□□□ -0.39
HLA-DQB1-202ENST00000399079 DHDDSQ86SQ9 333 aa12.63□□□□□ -0.39
HLA-DQB1-202ENST00000399079 DMRTC2Q8IXT2 367 aaPredicted RBP12.63□□□□□ -0.39
HLA-DQB1-202ENST00000399079 CNEP1R1Q8N9A8 125 aa12.63□□□□□ -0.39
HLA-DQB1-202ENST00000399079 ZNF563Q8TA94 476 aa12.63□□□□□ -0.39
HLA-DQB1-202ENST00000399079 ST8SIA1Q92185 356 aa12.63□□□□□ -0.39
HLA-DQB1-202ENST00000399079 PMM1Q92871 262 aa12.63□□□□□ -0.39
HLA-DQB1-202ENST00000399079 A4GALTQ9NPC4 353 aa12.63□□□□□ -0.39
HLA-DQB1-202ENST00000399079 EXOSC3Q9NQT5 275 aaKnown RBP12.63□□□□□ -0.39
HLA-DQB1-202ENST00000399079 JKAMPQ9P055 326 aa12.63□□□□□ -0.39
HLA-DQB1-202ENST00000399079 LRBAP50851 2863 aa12.63□□□□□ -0.39
HLA-DQB1-202ENST00000399079 A0A0G2JPF8 293 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 A0A1W2PNR3 127 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 HNRNPCL2B2RXH8 293 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 HNRNPCL3B7ZW38 293 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 FBP2O00757 339 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 HNRNPCL1O60812 293 aaKnown RBP12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 GKN3PP0CG01 181 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 HNRNPCL4P0DMR1 293 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 GPX2P18283 190 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 KIR2DL2P43627 348 aaPredicted RBP12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 IDH2P48735 452 aaKnown RBP12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 CARD18P57730 90 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 SELENBP1Q13228 472 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 SELPLGQ14242 412 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 GNA13Q14344 377 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 RUNDC3AQ59EK9 446 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 OR2A2Q6IF42 318 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 PLEKHM3Q6ZWE6 761 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 CMIPQ8IY22 773 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 CLIP4Q8N3C7 705 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 DPP10Q8N608 796 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 NFKBIDQ8NI38 313 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 TMEM234Q8WY98 164 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 ROBO4Q8WZ75 1007 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 STARD4Q96DR4 205 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 CPPED1Q9BRF8 314 aaPredicted RBP12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 CCDC106Q9BWC9 280 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 RSPO3Q9BXY4 272 aaPredicted RBP12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 SRXN1Q9BYN0 137 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 PRRG4Q9BZD6 226 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 COQ10BQ9H8M1 238 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 SAR1AQ9NR31 198 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 CTPS2Q9NRF8 586 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 ACER3Q9NUN7 267 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 KLHL14Q9P2G3 628 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 CLEC4AQ9UMR7 237 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 ZNF443Q9Y2A4 671 aaPredicted RBP12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 CHST2Q9Y4C5 530 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 GMEB1Q9Y692 573 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 CDHR4A6H8M9 788 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 EVPLLA8MZ36 301 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 SMNDC1O75940 238 aaKnown RBP eCLIP12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 PGM3O95394 542 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 ARAFP10398 606 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 PPIBP23284 216 aaKnown RBP12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 MTPNP58546 118 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 EEF1A1P68104 462 aaKnown RBP12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 KLF10Q13118 480 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 NFYCQ13952 458 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 CAPRIN1Q14444 709 aaKnown RBP12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 ADRM1Q16186 407 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 FBXL19-AS1Q494R0 122 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 PDSS1Q5T2R2 415 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 GCNT6Q5T4J0 391 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 C3orf33Q6P1S2 294 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 BTLAQ7Z6A9 289 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 TSPEARQ8WU66 669 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 C10orf82Q8WW14 230 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 RNASE6Q93091 150 aaKnown RBP12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 DNAJA3Q96EY1 480 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 ANKRD27Q96NW4 1050 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 CGREF1Q99674 301 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 PAQR5Q9NXK6 330 aaPredicted RBP12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 PACSIN3Q9UKS6 424 aa12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 MCTS1Q9ULC4 181 aaKnown RBP12.62□□□□□ -0.39
HLA-DQB1-202ENST00000399079 CFAP73A6NFT4 308 aa12.61□□□□□ -0.39
HLA-DQB1-202ENST00000399079 GJE1A6NN92 205 aa12.61□□□□□ -0.39
HLA-DQB1-202ENST00000399079 C5orf58C9J3I9 102 aa12.61□□□□□ -0.39
HLA-DQB1-202ENST00000399079 SYNGR4O95473 234 aa12.61□□□□□ -0.39
HLA-DQB1-202ENST00000399079 CRHP06850 196 aa12.61□□□□□ -0.39
HLA-DQB1-202ENST00000399079 FCGR2AP12318 317 aa12.61□□□□□ -0.39
HLA-DQB1-202ENST00000399079 PRG2P13727 222 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms