RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 SLC6A2P23975 617 aa16.9■□□□□ 0.3
COLCA2-201ENST00000398035 RYKP34925 604 aa16.9■□□□□ 0.3
COLCA2-201ENST00000398035 CLK1P49759 484 aaKnown RBP16.9■□□□□ 0.3
COLCA2-201ENST00000398035 NFYCQ13952 458 aa16.9■□□□□ 0.3
COLCA2-201ENST00000398035 TMEM176BQ3YBM2 270 aaPredicted RBP16.9■□□□□ 0.3
COLCA2-201ENST00000398035 MMEL1Q495T6 779 aa16.9■□□□□ 0.3
COLCA2-201ENST00000398035 REEP3Q6NUK4 255 aa16.9■□□□□ 0.3
COLCA2-201ENST00000398035 C3orf33Q6P1S2 294 aa16.9■□□□□ 0.3
COLCA2-201ENST00000398035 GRINAQ7Z429 371 aa16.9■□□□□ 0.3
COLCA2-201ENST00000398035 DHDDSQ86SQ9 333 aa16.9■□□□□ 0.3
COLCA2-201ENST00000398035 KRT73Q86Y46 540 aa16.9■□□□□ 0.3
COLCA2-201ENST00000398035 SLC25A43Q8WUT9 341 aaPredicted RBP16.9■□□□□ 0.3
COLCA2-201ENST00000398035 FIG4Q92562 907 aa16.9■□□□□ 0.3
COLCA2-201ENST00000398035 SLC35B4Q969S0 331 aa16.9■□□□□ 0.3
COLCA2-201ENST00000398035 CPNE4Q96A23 557 aaPredicted RBP16.9■□□□□ 0.3
COLCA2-201ENST00000398035 ANKRD27Q96NW4 1050 aa16.9■□□□□ 0.3
COLCA2-201ENST00000398035 NPAS1Q99742 590 aa16.9■□□□□ 0.3
COLCA2-201ENST00000398035 RNF122Q9H9V4 155 aa16.9■□□□□ 0.3
COLCA2-201ENST00000398035 A0A0J9YW62 118 aa16.89■□□□□ 0.29
COLCA2-201ENST00000398035 CDHR4A6H8M9 788 aa16.89■□□□□ 0.29
COLCA2-201ENST00000398035 C19orf84I3L1E1 186 aa16.89■□□□□ 0.29
COLCA2-201ENST00000398035 EFNA2O43921 213 aa16.89■□□□□ 0.29
COLCA2-201ENST00000398035 PGM3O95394 542 aa16.89■□□□□ 0.29
COLCA2-201ENST00000398035 SLC7A1P30825 629 aa16.89■□□□□ 0.29
COLCA2-201ENST00000398035 RBBP4Q09028 425 aa16.89■□□□□ 0.29
COLCA2-201ENST00000398035 MERTKQ12866 999 aa16.89■□□□□ 0.29
COLCA2-201ENST00000398035 CTU2Q2VPK5 515 aaKnown RBP16.89■□□□□ 0.29
COLCA2-201ENST00000398035 ZNF311Q5JNZ3 666 aa16.89■□□□□ 0.29
COLCA2-201ENST00000398035 MRPL2Q5T653 305 aaKnown RBP16.89■□□□□ 0.29
COLCA2-201ENST00000398035 RNF220Q5VTB9 566 aa16.89■□□□□ 0.29
COLCA2-201ENST00000398035 ZNF550Q7Z398 422 aa16.89■□□□□ 0.29
COLCA2-201ENST00000398035 KIF18BQ86Y91 864 aa16.89■□□□□ 0.29
COLCA2-201ENST00000398035 FNDC9Q8TBE3 224 aa16.89■□□□□ 0.29
COLCA2-201ENST00000398035 CNOT9Q92600 299 aaKnown RBP16.89■□□□□ 0.29
COLCA2-201ENST00000398035 ZNF845Q96IR2 970 aaPredicted RBP16.89■□□□□ 0.29
COLCA2-201ENST00000398035 KLHDC3Q9BQ90 382 aa16.89■□□□□ 0.29
COLCA2-201ENST00000398035 SPATA9Q9BWV2 254 aa16.89■□□□□ 0.29
COLCA2-201ENST00000398035 TMEM185BQ9H7F4 350 aa16.89■□□□□ 0.29
COLCA2-201ENST00000398035 DNAJB12Q9NXW2 375 aaKnown RBP16.89■□□□□ 0.29
COLCA2-201ENST00000398035 JKAMPQ9P055 326 aa16.89■□□□□ 0.29
COLCA2-201ENST00000398035 CLDN24A6NM45 220 aa16.88■□□□□ 0.29
COLCA2-201ENST00000398035 TNFSF11O14788 317 aa16.88■□□□□ 0.29
COLCA2-201ENST00000398035 NUDT7P0C024 238 aa16.88■□□□□ 0.29
COLCA2-201ENST00000398035 ARAFP10398 606 aa16.88■□□□□ 0.29
COLCA2-201ENST00000398035 IGFBP2P18065 325 aa16.88■□□□□ 0.29
COLCA2-201ENST00000398035 SFTPDP35247 375 aa16.88■□□□□ 0.29
COLCA2-201ENST00000398035 IDH2P48735 452 aaKnown RBP16.88■□□□□ 0.29
COLCA2-201ENST00000398035 COPZ1P61923 177 aa16.88■□□□□ 0.29
COLCA2-201ENST00000398035 CDK6Q00534 326 aa16.88■□□□□ 0.29
COLCA2-201ENST00000398035 FOXF2Q12947 444 aa16.88■□□□□ 0.29
COLCA2-201ENST00000398035 KLF10Q13118 480 aa16.88■□□□□ 0.29
COLCA2-201ENST00000398035 NCOA6Q14686 2063 aaPredicted RBP16.88■□□□□ 0.29
COLCA2-201ENST00000398035 MEX3BQ6ZN04 569 aaKnown RBP16.88■□□□□ 0.29
COLCA2-201ENST00000398035 PLEKHM3Q6ZWE6 761 aa16.88■□□□□ 0.29
COLCA2-201ENST00000398035 RETREG3Q86VR2 466 aa16.88■□□□□ 0.29
COLCA2-201ENST00000398035 DMRTC2Q8IXT2 367 aaPredicted RBP16.88■□□□□ 0.29
COLCA2-201ENST00000398035 PCYOX1LQ8NBM8 494 aa16.88■□□□□ 0.29
COLCA2-201ENST00000398035 BHLHE22Q8NFJ8 381 aaPredicted RBP16.88■□□□□ 0.29
COLCA2-201ENST00000398035 RNASE6Q93091 150 aaKnown RBP16.88■□□□□ 0.29
COLCA2-201ENST00000398035 MAL2Q969L2 176 aa16.88■□□□□ 0.29
COLCA2-201ENST00000398035 ZNF607Q96SK3 696 aa16.88■□□□□ 0.29
COLCA2-201ENST00000398035 NSRP1Q9H0G5 558 aaKnown RBP16.88■□□□□ 0.29
COLCA2-201ENST00000398035 PACSIN3Q9UKS6 424 aa16.88■□□□□ 0.29
COLCA2-201ENST00000398035 A0A1W2PNV4 684 aa16.87■□□□□ 0.29
COLCA2-201ENST00000398035 PRORSD1PA6NEY8 169 aa16.87■□□□□ 0.29
COLCA2-201ENST00000398035 MSTNO14793 375 aa16.87■□□□□ 0.29
COLCA2-201ENST00000398035 CXCL13O43927 109 aa16.87■□□□□ 0.29
COLCA2-201ENST00000398035 SERPINB7O75635 380 aa16.87■□□□□ 0.29
COLCA2-201ENST00000398035 PLGP00747 810 aaPredicted RBP16.87■□□□□ 0.29
COLCA2-201ENST00000398035 OPN1LWP04000 364 aa16.87■□□□□ 0.29
COLCA2-201ENST00000398035 CD1EP15812 388 aa16.87■□□□□ 0.29
COLCA2-201ENST00000398035 IL11P20809 199 aa16.87■□□□□ 0.29
COLCA2-201ENST00000398035 SLC1A3P43003 542 aa16.87■□□□□ 0.29
COLCA2-201ENST00000398035 RAC3P60763 192 aa16.87■□□□□ 0.29
COLCA2-201ENST00000398035 HMGN2P46Q86SG4 172 aa16.87■□□□□ 0.29
COLCA2-201ENST00000398035 VRK2Q86Y07 508 aa16.87■□□□□ 0.29
COLCA2-201ENST00000398035 SLC30A8Q8IWU4 369 aa16.87■□□□□ 0.29
COLCA2-201ENST00000398035 MCEMP1Q8IX19 187 aa16.87■□□□□ 0.29
COLCA2-201ENST00000398035 GCNT2Q8N0V5 402 aa16.87■□□□□ 0.29
COLCA2-201ENST00000398035 RELL2Q8NC24 303 aaPredicted RBP16.87■□□□□ 0.29
COLCA2-201ENST00000398035 GMPPAQ96IJ6 420 aaPredicted RBP16.87■□□□□ 0.29
COLCA2-201ENST00000398035 CCDC106Q9BWC9 280 aa16.87■□□□□ 0.29
COLCA2-201ENST00000398035 NPDC1Q9NQX5 325 aaPredicted RBP16.87■□□□□ 0.29
COLCA2-201ENST00000398035 ZNF443Q9Y2A4 671 aaPredicted RBP16.87■□□□□ 0.29
COLCA2-201ENST00000398035 CAPN7Q9Y6W3 813 aa16.87■□□□□ 0.29
COLCA2-201ENST00000398035 NCKAP5O14513 1909 aa16.87■□□□□ 0.29
COLCA2-201ENST00000398035 SETXQ7Z333 2677 aaKnown RBP16.87■□□□□ 0.29
COLCA2-201ENST00000398035 EEF1E1-BLOC1S5C9J1V9 151 aa16.87■□□□□ 0.29
COLCA2-201ENST00000398035 EEF1E1O43324 174 aaKnown RBP16.87■□□□□ 0.29
COLCA2-201ENST00000398035 TNFSF13O75888 250 aa16.87■□□□□ 0.29
COLCA2-201ENST00000398035 PRKAR1BP31321 381 aa16.87■□□□□ 0.29
COLCA2-201ENST00000398035 UQCRC1P31930 480 aa16.87■□□□□ 0.29
COLCA2-201ENST00000398035 PCYT1AP49585 367 aa16.87■□□□□ 0.29
COLCA2-201ENST00000398035 AGFG1P52594 562 aaKnown RBP16.87■□□□□ 0.29
COLCA2-201ENST00000398035 SF3A3Q12874 501 aaKnown RBP eCLIP16.87■□□□□ 0.298e-8■■■□□ 17
COLCA2-201ENST00000398035 EPS8Q12929 822 aa16.87■□□□□ 0.29
COLCA2-201ENST00000398035 SCARB2Q14108 478 aa16.87■□□□□ 0.29
COLCA2-201ENST00000398035 RNPS1Q15287 305 aaKnown RBP16.87■□□□□ 0.29
COLCA2-201ENST00000398035 TRMT5Q32P41 509 aaKnown RBP16.87■□□□□ 0.29
COLCA2-201ENST00000398035 RPS26P11Q5JNZ5 115 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms