RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 NARSO43776 548 aaKnown RBP10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 SLC25A12O75746 678 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 CDC123O75794 336 aaPredicted RBP10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 ZNF250P15622 560 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 ATP5A1P25705 553 aaKnown RBP10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 CTGFP29279 349 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 ARL4DP49703 201 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 CSNK1G2P78368 415 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 FOXK2Q01167 660 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 TAGLNQ01995 201 aaKnown RBP10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 DECR1Q16698 335 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 MRPL2Q5T653 305 aaKnown RBP10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 CCSAPQ6IQ19 270 aaPredicted RBP10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 KIAA1324Q6UXG2 1013 aaKnown RBP10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 ZNF227Q86WZ6 799 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 HCAR2Q8TDS4 363 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 FZD3Q9NPG1 666 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 WSB2Q9NYS7 404 aaPredicted RBP10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 KCND3Q9UK17 655 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 PLXNA1Q9UIW2 1896 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 ATP6V1G2-DDX39BF2Z307 99 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 H7C2Y5 167 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 SYT5O00445 386 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 PRAF2O60831 178 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 LDB3O75112 727 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 SIX6O95475 246 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 NUDT1P36639 197 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 C21orf58P58505 322 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 POU4F2Q12837 409 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 HLA-DQA1Q5Y7H0 255 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 SIRT6Q8N6T7 355 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 OR4Q3Q8NH05 313 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 BRIX1Q8TDN6 353 aaKnown RBP10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 CCDC107Q8WV48 283 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 CNOT9Q92600 299 aaKnown RBP10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 SGTBQ96EQ0 304 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 FCRL1Q96LA6 429 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 TNFRSF13CQ96RJ3 184 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 GPA33Q99795 319 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 C20orf85Q9H1P6 137 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 IGFLR1Q9H665 355 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 SLC39A1Q9NY26 324 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 ICKQ9UPZ9 632 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 LSM2Q9Y333 95 aaKnown RBP10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 SBF1O95248 1867 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 C5orf51A6NDU8 294 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 SURF4O15260 269 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 CD2P06729 351 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 POU3F3P20264 500 aaPredicted RBP10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 NPR2P20594 1047 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 PXNP49023 591 aaPredicted RBP10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 DEFB103AP81534 67 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 E2F1Q01094 437 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 HTR4Q13639 388 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 C2orf27AQ580R0 203 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 RAB12Q6IQ22 244 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 SLC35F2Q8IXU6 374 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 PLA2G15Q8NCC3 412 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 OR5J2Q8NH18 312 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 PFN4Q8NHR9 129 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 CASTOR1Q8WTX7 329 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 C15orf40Q8WUR7 153 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 ARRDC3Q96B67 414 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 ORAI1Q96D31 301 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 INSM2Q96T92 566 aaPredicted RBP10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 TEAD3Q99594 435 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 C7orf50Q9BRJ6 194 aaKnown RBP10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 LAMP5Q9UJQ1 280 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 MRPS33Q9Y291 106 aaKnown RBP10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 ZNF236Q9UL36 1845 aa10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 NYNRINQ9P2P1 1898 aaKnown RBP10.35□□□□□ -0.75
CSGALNACT1-202ENST00000397998 TRAV18A0A075B6X5 111 aa10.34□□□□□ -0.75
CSGALNACT1-202ENST00000397998 A0A1W2PR48 441 aa10.34□□□□□ -0.75
CSGALNACT1-202ENST00000397998 RAD1O60671 282 aa10.34□□□□□ -0.75
CSGALNACT1-202ENST00000397998 S100A9P06702 114 aaKnown RBP10.34□□□□□ -0.75
CSGALNACT1-202ENST00000397998 ZNF888P0CJ79 500 aaPredicted RBP10.34□□□□□ -0.75
CSGALNACT1-202ENST00000397998 METAP1P53582 386 aa10.34□□□□□ -0.75
CSGALNACT1-202ENST00000397998 CDK3Q00526 305 aa10.34□□□□□ -0.75
CSGALNACT1-202ENST00000397998 FAM69AQ5T7M9 428 aa10.34□□□□□ -0.75
CSGALNACT1-202ENST00000397998 FAAP20Q6NZ36 180 aa10.34□□□□□ -0.75
CSGALNACT1-202ENST00000397998 TMEFF1Q8IYR6 380 aa10.34□□□□□ -0.75
CSGALNACT1-202ENST00000397998 JAGN1Q8N5M9 183 aa10.34□□□□□ -0.75
CSGALNACT1-202ENST00000397998 POMGNT2Q8NAT1 580 aa10.34□□□□□ -0.75
CSGALNACT1-202ENST00000397998 CAMKVQ8NCB2 501 aa10.34□□□□□ -0.75
CSGALNACT1-202ENST00000397998 OR52E1Q8NGJ3 308 aa10.34□□□□□ -0.75
CSGALNACT1-202ENST00000397998 ELP4Q96EB1 424 aa10.34□□□□□ -0.75
CSGALNACT1-202ENST00000397998 SLC6A18Q96N87 628 aa10.34□□□□□ -0.75
CSGALNACT1-202ENST00000397998 WFDC6Q9BQY6 131 aa10.34□□□□□ -0.75
CSGALNACT1-202ENST00000397998 GPR174Q9BXC1 333 aa10.34□□□□□ -0.75
CSGALNACT1-202ENST00000397998 MFFQ9GZY8 342 aa10.34□□□□□ -0.75
CSGALNACT1-202ENST00000397998 CYSLTR2Q9NS75 346 aa10.34□□□□□ -0.75
CSGALNACT1-202ENST00000397998 A0A0G2JMZ2 1700 aa10.34□□□□□ -0.75
CSGALNACT1-202ENST00000397998 LRRC37A2A6NM11 1700 aa10.34□□□□□ -0.75
CSGALNACT1-202ENST00000397998 LEUTXA8MZ59 168 aa10.34□□□□□ -0.75
CSGALNACT1-202ENST00000397998 HYAL3O43820 417 aaPredicted RBP10.34□□□□□ -0.75
CSGALNACT1-202ENST00000397998 CTSLP07711 333 aa10.34□□□□□ -0.75
CSGALNACT1-202ENST00000397998 EPCAMP16422 314 aa10.34□□□□□ -0.75
CSGALNACT1-202ENST00000397998 NFYAP23511 347 aaPredicted RBP10.34□□□□□ -0.75
CSGALNACT1-202ENST00000397998 DNASE1L1P49184 302 aa10.34□□□□□ -0.75
CSGALNACT1-202ENST00000397998 TRA2BP62995 288 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms