RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 KRT80Q6KB66 452 aa17.36■□□□□ 0.37
TSPAN4-204ENST00000397404 CBLN3Q6UW01 205 aa17.36■□□□□ 0.37
TSPAN4-204ENST00000397404 IL20RBQ6UXL0 311 aa17.36■□□□□ 0.37
TSPAN4-204ENST00000397404 USP51Q70EK9 711 aa17.36■□□□□ 0.37
TSPAN4-204ENST00000397404 CYP4Z2PQ8N1L4 340 aa17.36■□□□□ 0.37
TSPAN4-204ENST00000397404 CADM2Q8N3J6 435 aa17.36■□□□□ 0.37
TSPAN4-204ENST00000397404 GALNT16Q8N428 558 aa17.36■□□□□ 0.37
TSPAN4-204ENST00000397404 OR9Q2Q8NGE9 314 aa17.36■□□□□ 0.37
TSPAN4-204ENST00000397404 SNIP1Q8TAD8 396 aaKnown RBP17.36■□□□□ 0.37
TSPAN4-204ENST00000397404 GPR119Q8TDV5 335 aa17.36■□□□□ 0.37
TSPAN4-204ENST00000397404 KCNE4Q8WWG9 221 aa17.36■□□□□ 0.37
TSPAN4-204ENST00000397404 TMEM41AQ96HV5 264 aa17.36■□□□□ 0.37
TSPAN4-204ENST00000397404 TEX12Q9BXU0 123 aa17.36■□□□□ 0.37
TSPAN4-204ENST00000397404 TIMMDC1Q9NPL8 285 aa17.36■□□□□ 0.37
TSPAN4-204ENST00000397404 SACM1LQ9NTJ5 587 aa17.36■□□□□ 0.37
TSPAN4-204ENST00000397404 TAS2R10Q9NYW0 307 aa17.36■□□□□ 0.37
TSPAN4-204ENST00000397404 STMN3Q9NZ72 180 aa17.36■□□□□ 0.37
TSPAN4-204ENST00000397404 ELOA3DA6NLF2 546 aaPredicted RBP17.35■□□□□ 0.37
TSPAN4-204ENST00000397404 LYPD3O95274 346 aa17.35■□□□□ 0.37
TSPAN4-204ENST00000397404 NUDT14O95848 222 aa17.35■□□□□ 0.37
TSPAN4-204ENST00000397404 THY1P04216 161 aa17.35■□□□□ 0.37
TSPAN4-204ENST00000397404 P04436 131 aa17.35■□□□□ 0.37
TSPAN4-204ENST00000397404 ADH6P28332 368 aa17.35■□□□□ 0.37
TSPAN4-204ENST00000397404 EIF1P41567 113 aaKnown RBP17.35■□□□□ 0.37
TSPAN4-204ENST00000397404 OMPP47874 163 aa17.35■□□□□ 0.37
TSPAN4-204ENST00000397404 GSSP48637 474 aa17.35■□□□□ 0.37
TSPAN4-204ENST00000397404 POLR2HP52434 150 aaKnown RBP17.35■□□□□ 0.37
TSPAN4-204ENST00000397404 TGIF1Q15583 401 aa17.35■□□□□ 0.37
TSPAN4-204ENST00000397404 COL28A1Q2UY09 1125 aa17.35■□□□□ 0.37
TSPAN4-204ENST00000397404 ELOA3BQ3SY89 546 aa17.35■□□□□ 0.37
TSPAN4-204ENST00000397404 C6orf52Q5T4I8 152 aa17.35■□□□□ 0.37
TSPAN4-204ENST00000397404 AGAP7PQ5VUJ5 663 aa17.35■□□□□ 0.37
TSPAN4-204ENST00000397404 RASSF6Q6ZTQ3 369 aa17.35■□□□□ 0.37
TSPAN4-204ENST00000397404 TMPRSS11FQ6ZWK6 438 aa17.35■□□□□ 0.37
TSPAN4-204ENST00000397404 ZER1Q7Z7L7 766 aa17.35■□□□□ 0.37
TSPAN4-204ENST00000397404 ATG4DQ86TL0 474 aaPredicted RBP17.35■□□□□ 0.37
TSPAN4-204ENST00000397404 NKAIN4Q8IVV8 208 aa17.35■□□□□ 0.37
TSPAN4-204ENST00000397404 CHERPQ8IWX8 916 aaKnown RBP17.35■□□□□ 0.37
TSPAN4-204ENST00000397404 GATSQ8NAP1 163 aa17.35■□□□□ 0.37
TSPAN4-204ENST00000397404 ELOA3Q8NG57 546 aa17.35■□□□□ 0.37
TSPAN4-204ENST00000397404 OR5M3Q8NGP4 307 aa17.35■□□□□ 0.37
TSPAN4-204ENST00000397404 HRASLS5Q96KN8 279 aa17.35■□□□□ 0.37
TSPAN4-204ENST00000397404 AGAP4Q96P64 663 aa17.35■□□□□ 0.37
TSPAN4-204ENST00000397404 BARD1Q99728 777 aaKnown RBP17.35■□□□□ 0.37
TSPAN4-204ENST00000397404 PRRG3Q9BZD7 231 aa17.35■□□□□ 0.37
TSPAN4-204ENST00000397404 CTPS2Q9NRF8 586 aa17.35■□□□□ 0.37
TSPAN4-204ENST00000397404 PIEZO1Q92508 2521 aa17.34■□□□□ 0.37
TSPAN4-204ENST00000397404 ADAM10O14672 748 aa17.34■□□□□ 0.37
TSPAN4-204ENST00000397404 MPZL2O60487 215 aa17.34■□□□□ 0.37
TSPAN4-204ENST00000397404 APOBEC1P41238 236 aaKnown RBP17.34■□□□□ 0.37
TSPAN4-204ENST00000397404 SLC9A3P48764 834 aa17.34■□□□□ 0.37
TSPAN4-204ENST00000397404 ZNF41P51814 821 aaPredicted RBP17.34■□□□□ 0.37
TSPAN4-204ENST00000397404 NUP107P57740 925 aa17.34■□□□□ 0.37
TSPAN4-204ENST00000397404 LAPTM4AQ15012 233 aa17.34■□□□□ 0.37
TSPAN4-204ENST00000397404 SLC25A53Q5H9E4 307 aa17.34■□□□□ 0.37
TSPAN4-204ENST00000397404 NRMQ8IXM6 262 aa17.34■□□□□ 0.37
TSPAN4-204ENST00000397404 C8orf59Q8N0T1 100 aaPredicted RBP17.34■□□□□ 0.37
TSPAN4-204ENST00000397404 DEPDC4Q8N2C3 294 aa17.34■□□□□ 0.37
TSPAN4-204ENST00000397404 MRGPRX4Q96LA9 322 aa17.34■□□□□ 0.37
TSPAN4-204ENST00000397404 PITX2Q99697 317 aa17.34■□□□□ 0.37
TSPAN4-204ENST00000397404 NIPSNAP1Q9BPW8 284 aa17.34■□□□□ 0.37
TSPAN4-204ENST00000397404 UTP23Q9BRU9 249 aaKnown RBP17.34■□□□□ 0.37
TSPAN4-204ENST00000397404 YTHDF1Q9BYJ9 559 aaKnown RBP17.34■□□□□ 0.37
TSPAN4-204ENST00000397404 NDRG4Q9ULP0 352 aaKnown RBP17.34■□□□□ 0.37
TSPAN4-204ENST00000397404 WASF3Q9UPY6 502 aa17.34■□□□□ 0.37
TSPAN4-204ENST00000397404 E9PQ18 207 aa17.33■□□□□ 0.37
TSPAN4-204ENST00000397404 BCKDKO14874 412 aa17.33■□□□□ 0.37
TSPAN4-204ENST00000397404 ADAM11O75078 769 aa17.33■□□□□ 0.37
TSPAN4-204ENST00000397404 CXCR1P25024 350 aa17.33■□□□□ 0.37
TSPAN4-204ENST00000397404 PTGDSP41222 190 aa17.33■□□□□ 0.37
TSPAN4-204ENST00000397404 KLHL17Q6TDP4 642 aa17.33■□□□□ 0.37
TSPAN4-204ENST00000397404 ISLR2Q6UXK2 745 aa17.33■□□□□ 0.37
TSPAN4-204ENST00000397404 PLCZ1Q86YW0 608 aa17.33■□□□□ 0.37
TSPAN4-204ENST00000397404 SIRT6Q8N6T7 355 aa17.33■□□□□ 0.37
TSPAN4-204ENST00000397404 FADS6Q8N9I5 356 aa17.33■□□□□ 0.37
TSPAN4-204ENST00000397404 OR6S1Q8NH40 331 aa17.33■□□□□ 0.37
TSPAN4-204ENST00000397404 TMEM255BQ8WV15 326 aa17.33■□□□□ 0.37
TSPAN4-204ENST00000397404 OSTF1Q92882 214 aa17.33■□□□□ 0.37
TSPAN4-204ENST00000397404 ZBTB8AQ96BR9 441 aa17.33■□□□□ 0.37
TSPAN4-204ENST00000397404 SH3YL1Q96HL8 342 aaPredicted RBP17.33■□□□□ 0.37
TSPAN4-204ENST00000397404 MBOAT4Q96T53 435 aa17.33■□□□□ 0.37
TSPAN4-204ENST00000397404 SCNM1Q9BWG6 230 aa17.33■□□□□ 0.37
TSPAN4-204ENST00000397404 PRR14Q9BWN1 585 aa17.33■□□□□ 0.37
TSPAN4-204ENST00000397404 NDEL1Q9GZM8 345 aa17.33■□□□□ 0.37
TSPAN4-204ENST00000397404 RIBC2Q9H4K1 309 aa17.33■□□□□ 0.37
TSPAN4-204ENST00000397404 PNPLA3Q9NST1 481 aa17.33■□□□□ 0.37
TSPAN4-204ENST00000397404 KLK13Q9UKR3 277 aa17.33■□□□□ 0.37
TSPAN4-204ENST00000397404 SPIN1Q9Y657 262 aaPredicted RBP17.33■□□□□ 0.37
TSPAN4-204ENST00000397404 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.32■□□□□ 0.36
TSPAN4-204ENST00000397404 SNPHO15079 494 aa17.32■□□□□ 0.36
TSPAN4-204ENST00000397404 KLF4O43474 513 aa17.32■□□□□ 0.36
TSPAN4-204ENST00000397404 CRISP1P54107 249 aa17.32■□□□□ 0.36
TSPAN4-204ENST00000397404 TPD52P55327 224 aaPredicted RBP17.32■□□□□ 0.36
TSPAN4-204ENST00000397404 IL1RL1Q01638 556 aa17.32■□□□□ 0.36
TSPAN4-204ENST00000397404 TEKQ02763 1124 aa17.32■□□□□ 0.36
TSPAN4-204ENST00000397404 CDC20Q12834 499 aa17.32■□□□□ 0.36
TSPAN4-204ENST00000397404 PDK3Q15120 406 aa17.32■□□□□ 0.36
TSPAN4-204ENST00000397404 QPRTQ15274 297 aa17.32■□□□□ 0.36
TSPAN4-204ENST00000397404 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.32■□□□□ 0.36
TSPAN4-204ENST00000397404 GLYR1Q49A26 553 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms