RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 RHCGQ9UBD6 479 aa21.44■■□□□ 1.02
TSPAN4-202ENST00000397396 OAZ3Q9UMX2 235 aa21.44■■□□□ 1.02
TSPAN4-202ENST00000397396 U3KQV3 271 aa21.44■■□□□ 1.02
TSPAN4-202ENST00000397396 G3V2T6 193 aa21.43■■□□□ 1.02
TSPAN4-202ENST00000397396 ETV2O00321 342 aaPredicted RBP21.43■■□□□ 1.02
TSPAN4-202ENST00000397396 PEX1O43933 1283 aa21.43■■□□□ 1.02
TSPAN4-202ENST00000397396 CCNB2O95067 398 aa21.43■■□□□ 1.02
TSPAN4-202ENST00000397396 IFNGR2P38484 337 aa21.43■■□□□ 1.02
TSPAN4-202ENST00000397396 EIF1P41567 113 aaKnown RBP21.43■■□□□ 1.02
TSPAN4-202ENST00000397396 LIMS1P48059 325 aa21.43■■□□□ 1.02
TSPAN4-202ENST00000397396 RRM2BQ7LG56 351 aa21.43■■□□□ 1.02
TSPAN4-202ENST00000397396 OR4C15Q8NGM1 316 aa21.43■■□□□ 1.02
TSPAN4-202ENST00000397396 ZBTB8AQ96BR9 441 aa21.43■■□□□ 1.02
TSPAN4-202ENST00000397396 C3orf49Q96BT1 292 aa21.43■■□□□ 1.02
TSPAN4-202ENST00000397396 C1GALT1C1Q96EU7 318 aa21.43■■□□□ 1.02
TSPAN4-202ENST00000397396 PRR14Q9BWN1 585 aa21.43■■□□□ 1.02
TSPAN4-202ENST00000397396 MED17Q9NVC6 651 aa21.43■■□□□ 1.02
TSPAN4-202ENST00000397396 NTNG1Q9Y2I2 539 aa21.43■■□□□ 1.02
TSPAN4-202ENST00000397396 C15orf41Q9Y2V0 281 aa21.43■■□□□ 1.02
TSPAN4-202ENST00000397396 TNFSF12-TNFSF13A0A0A6YY99 330 aa21.42■■□□□ 1.02
TSPAN4-202ENST00000397396 SAC3D1A6NKF1 404 aa21.42■■□□□ 1.02
TSPAN4-202ENST00000397396 G3V3Y1 287 aa21.42■■□□□ 1.02
TSPAN4-202ENST00000397396 GMFGO60234 142 aa21.42■■□□□ 1.02
TSPAN4-202ENST00000397396 POLR2HP52434 150 aaKnown RBP21.42■■□□□ 1.02
TSPAN4-202ENST00000397396 MAP2K6P52564 334 aa21.42■■□□□ 1.02
TSPAN4-202ENST00000397396 MICAQ29983 383 aa21.42■■□□□ 1.02
TSPAN4-202ENST00000397396 EXOC3L2Q2M3D2 409 aa21.42■■□□□ 1.02
TSPAN4-202ENST00000397396 OGFRL1Q5TC84 451 aaPredicted RBP21.42■■□□□ 1.02
TSPAN4-202ENST00000397396 TSPYL5Q86VY4 417 aaPredicted RBP21.42■■□□□ 1.02
TSPAN4-202ENST00000397396 SULF2Q8IWU5 870 aa21.42■■□□□ 1.02
TSPAN4-202ENST00000397396 RNF113BQ8IZP6 322 aaKnown RBP21.42■■□□□ 1.02
TSPAN4-202ENST00000397396 OR52J3Q8NH60 311 aa21.42■■□□□ 1.02
TSPAN4-202ENST00000397396 RNF217Q8TC41 542 aa21.42■■□□□ 1.02
TSPAN4-202ENST00000397396 ACOT11Q8WXI4 607 aaPredicted RBP21.42■■□□□ 1.02
TSPAN4-202ENST00000397396 MRGPRX4Q96LA9 322 aa21.42■■□□□ 1.02
TSPAN4-202ENST00000397396 PSD2Q9BQI7 771 aa21.42■■□□□ 1.02
TSPAN4-202ENST00000397396 ADAM19Q9H013 955 aa21.42■■□□□ 1.02
TSPAN4-202ENST00000397396 KLHL1Q9NR64 748 aa21.42■■□□□ 1.02
TSPAN4-202ENST00000397396 MAN2C1Q9NTJ4 1040 aa21.42■■□□□ 1.02
TSPAN4-202ENST00000397396 VNN3Q9NY84 501 aa21.42■■□□□ 1.02
TSPAN4-202ENST00000397396 DKKL1Q9UK85 242 aa21.42■■□□□ 1.02
TSPAN4-202ENST00000397396 FREM2Q5SZK8 3169 aa21.42■■□□□ 1.02
TSPAN4-202ENST00000397396 ELOA3DA6NLF2 546 aaPredicted RBP21.41■■□□□ 1.02
TSPAN4-202ENST00000397396 C17orf51A8MQB3 221 aa21.41■■□□□ 1.02
TSPAN4-202ENST00000397396 PRKCAP17252 672 aa21.41■■□□□ 1.02
TSPAN4-202ENST00000397396 ADH6P28332 368 aa21.41■■□□□ 1.02
TSPAN4-202ENST00000397396 SRD5A2P31213 254 aa21.41■■□□□ 1.02
TSPAN4-202ENST00000397396 GCKP35557 465 aa21.41■■□□□ 1.02
TSPAN4-202ENST00000397396 APOBEC1P41238 236 aaKnown RBP21.41■■□□□ 1.02
TSPAN4-202ENST00000397396 GPR85P60893 370 aa21.41■■□□□ 1.02
TSPAN4-202ENST00000397396 ELOA3BQ3SY89 546 aa21.41■■□□□ 1.02
TSPAN4-202ENST00000397396 GLYR1Q49A26 553 aaPredicted RBP21.41■■□□□ 1.02
TSPAN4-202ENST00000397396 SLC25A53Q5H9E4 307 aa21.41■■□□□ 1.02
TSPAN4-202ENST00000397396 GALNTL5Q7Z4T8 443 aa21.41■■□□□ 1.02
TSPAN4-202ENST00000397396 ATG4DQ86TL0 474 aaPredicted RBP21.41■■□□□ 1.02
TSPAN4-202ENST00000397396 PACRGLQ8N7B6 248 aa21.41■■□□□ 1.02
TSPAN4-202ENST00000397396 ELOA3Q8NG57 546 aa21.41■■□□□ 1.02
TSPAN4-202ENST00000397396 SLC7A13Q8TCU3 470 aa21.41■■□□□ 1.02
TSPAN4-202ENST00000397396 GIPC3Q8TF64 312 aa21.41■■□□□ 1.02
TSPAN4-202ENST00000397396 DNAJC9Q8WXX5 260 aa21.41■■□□□ 1.02
TSPAN4-202ENST00000397396 CIB1Q99828 191 aa21.41■■□□□ 1.02
TSPAN4-202ENST00000397396 SLC19A3Q9BZV2 496 aa21.41■■□□□ 1.02
TSPAN4-202ENST00000397396 GABARAPL1Q9H0R8 117 aa21.41■■□□□ 1.02
TSPAN4-202ENST00000397396 DEPPQ9NTK1 212 aa21.41■■□□□ 1.02
TSPAN4-202ENST00000397396 TUBA8Q9NY65 449 aaPredicted RBP21.41■■□□□ 1.02
TSPAN4-202ENST00000397396 TUBD1Q9UJT1 453 aa21.41■■□□□ 1.02
TSPAN4-202ENST00000397396 FBXL2Q9UKC9 423 aa21.41■■□□□ 1.02
TSPAN4-202ENST00000397396 MRPS18CQ9Y3D5 142 aaKnown RBP21.41■■□□□ 1.02
TSPAN4-202ENST00000397396 A0A087WUJ7 227 aa21.4■■□□□ 1.02
TSPAN4-202ENST00000397396 C7orf72A4D263 438 aa21.4■■□□□ 1.02
TSPAN4-202ENST00000397396 HTR3EA5X5Y0 456 aa21.4■■□□□ 1.02
TSPAN4-202ENST00000397396 LRRC3CA6NJW4 275 aa21.4■■□□□ 1.02
TSPAN4-202ENST00000397396 ACOT7O00154 380 aa21.4■■□□□ 1.02
TSPAN4-202ENST00000397396 DPP4P27487 766 aa21.4■■□□□ 1.02
TSPAN4-202ENST00000397396 MEOX1P50221 254 aa21.4■■□□□ 1.02
TSPAN4-202ENST00000397396 PLPPR5Q32ZL2 321 aa21.4■■□□□ 1.02
TSPAN4-202ENST00000397396 TTC33Q6PID6 262 aaPredicted RBP21.4■■□□□ 1.02
TSPAN4-202ENST00000397396 ZNF730Q6ZMV8 503 aa21.4■■□□□ 1.02
TSPAN4-202ENST00000397396 ZBTB49Q6ZSB9 765 aa21.4■■□□□ 1.02
TSPAN4-202ENST00000397396 STK32CQ86UX6 486 aa21.4■■□□□ 1.02
TSPAN4-202ENST00000397396 RBM4BQ9BQ04 359 aaKnown RBP21.4■■□□□ 1.02
TSPAN4-202ENST00000397396 RBM4Q9BWF3 364 aaKnown RBP21.4■■□□□ 1.02
TSPAN4-202ENST00000397396 PDP1Q9P0J1 537 aaPredicted RBP21.4■■□□□ 1.02
TSPAN4-202ENST00000397396 VDAC3Q9Y277 283 aa21.4■■□□□ 1.02
TSPAN4-202ENST00000397396 SPIN1Q9Y657 262 aaPredicted RBP21.4■■□□□ 1.02
TSPAN4-202ENST00000397396 A0A0G2JMM0 328 aa21.39■■□□□ 1.01
TSPAN4-202ENST00000397396 TRBV4-1A0A0J9YWV2 114 aa21.39■■□□□ 1.01
TSPAN4-202ENST00000397396 A0A1W2PPB8 328 aa21.39■■□□□ 1.01
TSPAN4-202ENST00000397396 A0A1W2PRS3 328 aa21.39■■□□□ 1.01
TSPAN4-202ENST00000397396 SH3PXD2BA1X283 911 aa21.39■■□□□ 1.01
TSPAN4-202ENST00000397396 KIR3DP1A8MWS1 328 aa21.39■■□□□ 1.01
TSPAN4-202ENST00000397396 THY1P04216 161 aa21.39■■□□□ 1.01
TSPAN4-202ENST00000397396 ANXA8P13928 327 aa21.39■■□□□ 1.01
TSPAN4-202ENST00000397396 ZNF17P17021 662 aa21.39■■□□□ 1.01
TSPAN4-202ENST00000397396 CXCR1P25024 350 aa21.39■■□□□ 1.01
TSPAN4-202ENST00000397396 FKBP2P26885 142 aaKnown RBP21.39■■□□□ 1.01
TSPAN4-202ENST00000397396 PEX2P28328 305 aa21.39■■□□□ 1.01
TSPAN4-202ENST00000397396 TACR3P29371 465 aa21.39■■□□□ 1.01
TSPAN4-202ENST00000397396 PTDSS1P48651 473 aaKnown RBP21.39■■□□□ 1.01
TSPAN4-202ENST00000397396 IST1P53990 364 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms