RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 KCNK2O95069 426 aa12.37□□□□□ -0.43
SEC13-205ENST00000397101 H6PDO95479 791 aa12.37□□□□□ -0.43
SEC13-205ENST00000397101 TFPTP0C1Z6 253 aa12.37□□□□□ -0.43
SEC13-205ENST00000397101 CT45A8P0DMV1 189 aa12.37□□□□□ -0.43
SEC13-205ENST00000397101 CT45A9P0DMV2 189 aa12.37□□□□□ -0.43
SEC13-205ENST00000397101 BMP2P12643 396 aa12.37□□□□□ -0.43
SEC13-205ENST00000397101 PCSK6P29122 969 aa12.37□□□□□ -0.43
SEC13-205ENST00000397101 PPP2R2BQ00005 443 aa12.37□□□□□ -0.43
SEC13-205ENST00000397101 TRIM25Q14258 630 aaKnown RBP12.37□□□□□ -0.43
SEC13-205ENST00000397101 ADRM1Q16186 407 aa12.37□□□□□ -0.43
SEC13-205ENST00000397101 LRRC23Q53EV4 343 aaPredicted RBP12.37□□□□□ -0.43
SEC13-205ENST00000397101 CT45A2Q5DJT8 189 aa12.37□□□□□ -0.43
SEC13-205ENST00000397101 RPS26P11Q5JNZ5 115 aaPredicted RBP12.37□□□□□ -0.43
SEC13-205ENST00000397101 TBCELQ5QJ74 424 aa12.37□□□□□ -0.43
SEC13-205ENST00000397101 PGM2L1Q6PCE3 622 aa12.37□□□□□ -0.43
SEC13-205ENST00000397101 CYP2R1Q6VVX0 501 aa12.37□□□□□ -0.43
SEC13-205ENST00000397101 OLIG3Q7RTU3 272 aa12.37□□□□□ -0.43
SEC13-205ENST00000397101 KRT73Q86Y46 540 aa12.37□□□□□ -0.43
SEC13-205ENST00000397101 BBS10Q8TAM1 723 aa12.37□□□□□ -0.43
SEC13-205ENST00000397101 TMBIM1Q969X1 311 aa12.37□□□□□ -0.43
SEC13-205ENST00000397101 EFHD2Q96C19 240 aaPredicted RBP12.37□□□□□ -0.43
SEC13-205ENST00000397101 NSMCE2Q96MF7 247 aa12.37□□□□□ -0.43
SEC13-205ENST00000397101 TRNT1Q96Q11 434 aaKnown RBP12.37□□□□□ -0.43
SEC13-205ENST00000397101 ZNF607Q96SK3 696 aa12.37□□□□□ -0.43
SEC13-205ENST00000397101 TIMP4Q99727 224 aa12.37□□□□□ -0.43
SEC13-205ENST00000397101 SLC6A15Q9H2J7 730 aa12.37□□□□□ -0.43
SEC13-205ENST00000397101 MUC13Q9H3R2 512 aa12.37□□□□□ -0.43
SEC13-205ENST00000397101 SLC7A8Q9UHI5 535 aa12.37□□□□□ -0.43
SEC13-205ENST00000397101 MKLN1Q9UL63 735 aa12.37□□□□□ -0.43
SEC13-205ENST00000397101 WDR45Q9Y484 360 aa12.37□□□□□ -0.43
SEC13-205ENST00000397101 A0A0G2JPF8 293 aa12.36□□□□□ -0.43
SEC13-205ENST00000397101 HNRNPCL2B2RXH8 293 aa12.36□□□□□ -0.43
SEC13-205ENST00000397101 HNRNPCL3B7ZW38 293 aa12.36□□□□□ -0.43
SEC13-205ENST00000397101 H7C1Q1 480 aa12.36□□□□□ -0.43
SEC13-205ENST00000397101 ARPC2O15144 300 aa12.36□□□□□ -0.43
SEC13-205ENST00000397101 PGM3O95394 542 aa12.36□□□□□ -0.43
SEC13-205ENST00000397101 IFNA14P01570 189 aa12.36□□□□□ -0.43
SEC13-205ENST00000397101 CHRM4P08173 479 aa12.36□□□□□ -0.43
SEC13-205ENST00000397101 HNRNPCL4P0DMR1 293 aa12.36□□□□□ -0.43
SEC13-205ENST00000397101 HPGDP15428 266 aa12.36□□□□□ -0.43
SEC13-205ENST00000397101 GGT1P19440 569 aa12.36□□□□□ -0.43
SEC13-205ENST00000397101 MAP3K8P41279 467 aa12.36□□□□□ -0.43
SEC13-205ENST00000397101 PSPHP78330 225 aa12.36□□□□□ -0.43
SEC13-205ENST00000397101 CHRNEQ04844 493 aa12.36□□□□□ -0.43
SEC13-205ENST00000397101 TRAP1Q12931 704 aaKnown RBP12.36□□□□□ -0.43
SEC13-205ENST00000397101 VEZF1Q14119 521 aa12.36□□□□□ -0.43
SEC13-205ENST00000397101 FLOT2Q14254 428 aa12.36□□□□□ -0.43
SEC13-205ENST00000397101 HEPHL1Q6MZM0 1159 aa12.36□□□□□ -0.43
SEC13-205ENST00000397101 LRRC74BQ6ZQY2 392 aa12.36□□□□□ -0.43
SEC13-205ENST00000397101 PATL1Q86TB9 770 aaKnown RBP12.36□□□□□ -0.43
SEC13-205ENST00000397101 SPATA24Q86W54 205 aa12.36□□□□□ -0.43
SEC13-205ENST00000397101 CIARTQ8N365 385 aaPredicted RBP12.36□□□□□ -0.43
SEC13-205ENST00000397101 ZNF614Q8N883 585 aa12.36□□□□□ -0.43
SEC13-205ENST00000397101 C17orf47Q8NEP4 570 aa12.36□□□□□ -0.43
SEC13-205ENST00000397101 HOXB13Q92826 284 aaPredicted RBP12.36□□□□□ -0.43
SEC13-205ENST00000397101 ASB9Q96DX5 294 aa12.36□□□□□ -0.43
SEC13-205ENST00000397101 OMA1Q96E52 524 aa12.36□□□□□ -0.43
SEC13-205ENST00000397101 SDF2Q99470 211 aa12.36□□□□□ -0.43
SEC13-205ENST00000397101 SPATA5L1Q9BVQ7 753 aa12.36□□□□□ -0.43
SEC13-205ENST00000397101 CALHM2Q9HA72 323 aa12.36□□□□□ -0.43
SEC13-205ENST00000397101 POMPQ9Y244 141 aa12.36□□□□□ -0.43
SEC13-205ENST00000397101 NPFFR2Q9Y5X5 522 aa12.36□□□□□ -0.43
SEC13-205ENST00000397101 CHCHD2Q9Y6H1 151 aaPredicted RBP12.36□□□□□ -0.43
SEC13-205ENST00000397101 ATRQ13535 2644 aa12.36□□□□□ -0.43
SEC13-205ENST00000397101 ZANQ9Y493 2812 aa12.35□□□□□ -0.43
SEC13-205ENST00000397101 PRAMEF27A3QJZ7 478 aa12.35□□□□□ -0.43
SEC13-205ENST00000397101 KDM4EB2RXH2 506 aaPredicted RBP12.35□□□□□ -0.43
SEC13-205ENST00000397101 H0YHG0 523 aa12.35□□□□□ -0.43
SEC13-205ENST00000397101 M0QX08 132 aa12.35□□□□□ -0.43
SEC13-205ENST00000397101 TO15178 435 aa12.35□□□□□ -0.43
SEC13-205ENST00000397101 SMPD2O60906 423 aa12.35□□□□□ -0.43
SEC13-205ENST00000397101 TRIM3O75382 744 aaPredicted RBP12.35□□□□□ -0.43
SEC13-205ENST00000397101 SERPINB7O75635 380 aa12.35□□□□□ -0.43
SEC13-205ENST00000397101 IL33O95760 270 aa12.35□□□□□ -0.43
SEC13-205ENST00000397101 ZNF682O95780 498 aa12.35□□□□□ -0.43
SEC13-205ENST00000397101 HPNP05981 417 aa12.35□□□□□ -0.43
SEC13-205ENST00000397101 FBXO45P0C2W1 286 aa12.35□□□□□ -0.43
SEC13-205ENST00000397101 KDELR2P33947 212 aa12.35□□□□□ -0.43
SEC13-205ENST00000397101 PCYT1AP49585 367 aa12.35□□□□□ -0.43
SEC13-205ENST00000397101 TMED10P49755 219 aaKnown RBP12.35□□□□□ -0.43
SEC13-205ENST00000397101 MS4A2Q01362 244 aa12.35□□□□□ -0.43
SEC13-205ENST00000397101 EXOSC6Q5RKV6 272 aaKnown RBP12.35□□□□□ -0.43
SEC13-205ENST00000397101 VASNQ6EMK4 673 aa12.35□□□□□ -0.43
SEC13-205ENST00000397101 HMGN2P46Q86SG4 172 aa12.35□□□□□ -0.43
SEC13-205ENST00000397101 PEX5LQ8IYB4 626 aa12.35□□□□□ -0.43
SEC13-205ENST00000397101 ZNF619Q8N2I2 560 aa12.35□□□□□ -0.43
SEC13-205ENST00000397101 ZNF441Q8N8Z8 693 aa12.35□□□□□ -0.43
SEC13-205ENST00000397101 BHLHE22Q8NFJ8 381 aaPredicted RBP12.35□□□□□ -0.43
SEC13-205ENST00000397101 SPPL2AQ8TCT8 520 aa12.35□□□□□ -0.43
SEC13-205ENST00000397101 UTP4Q969X6 686 aaKnown RBP12.35□□□□□ -0.43
SEC13-205ENST00000397101 Q96MF0 132 aa12.35□□□□□ -0.43
SEC13-205ENST00000397101 ZFP3Q96NJ6 502 aa12.35□□□□□ -0.43
SEC13-205ENST00000397101 COL21A1Q96P44 957 aa12.35□□□□□ -0.43
SEC13-205ENST00000397101 ADOQ96SZ5 270 aa12.35□□□□□ -0.43
SEC13-205ENST00000397101 UBQLN3Q9H347 655 aa12.35□□□□□ -0.43
SEC13-205ENST00000397101 MTHFD2LQ9H903 347 aaPredicted RBP12.35□□□□□ -0.43
SEC13-205ENST00000397101 POLE3Q9NRF9 147 aa12.35□□□□□ -0.43
SEC13-205ENST00000397101 FBXO34Q9NWN3 711 aa12.35□□□□□ -0.43
SEC13-205ENST00000397101 ADPRHL2Q9NX46 363 aa12.35□□□□□ -0.43
SEC13-205ENST00000397101 ACTR3BQ9P1U1 418 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms