RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 MCCC2Q9HCC0 563 aa15.46■□□□□ 0.07
NUP50-202ENST00000396096 C14orf119Q9NWQ9 140 aa15.46■□□□□ 0.07
NUP50-202ENST00000396096 BABAM2Q9NXR7 383 aa15.46■□□□□ 0.07
NUP50-202ENST00000396096 SERTAD3Q9UJW9 196 aa15.46■□□□□ 0.07
NUP50-202ENST00000396096 ERVK-19Q9WJR5 959 aa15.46■□□□□ 0.07
NUP50-202ENST00000396096 CDC123O75794 336 aaPredicted RBP15.46■□□□□ 0.06
NUP50-202ENST00000396096 CLPSP04118 112 aa15.46■□□□□ 0.06
NUP50-202ENST00000396096 CD53P19397 219 aa15.46■□□□□ 0.06
NUP50-202ENST00000396096 MAOAP21397 527 aa15.46■□□□□ 0.06
NUP50-202ENST00000396096 IGFBP4P22692 258 aa15.46■□□□□ 0.06
NUP50-202ENST00000396096 CD300CQ08708 224 aa15.46■□□□□ 0.06
NUP50-202ENST00000396096 ARHGAP11AQ6P4F7 1023 aa15.46■□□□□ 0.06
NUP50-202ENST00000396096 MARCH9Q86YJ5 346 aa15.46■□□□□ 0.06
NUP50-202ENST00000396096 OR8H2Q8N162 312 aa15.46■□□□□ 0.06
NUP50-202ENST00000396096 BCORP1Q8N888 145 aa15.46■□□□□ 0.06
NUP50-202ENST00000396096 OR51Q1Q8NH59 317 aa15.46■□□□□ 0.06
NUP50-202ENST00000396096 OR51A7Q8NH64 312 aa15.46■□□□□ 0.06
NUP50-202ENST00000396096 NACC2Q96BF6 587 aa15.46■□□□□ 0.06
NUP50-202ENST00000396096 TNFRSF13CQ96RJ3 184 aa15.46■□□□□ 0.06
NUP50-202ENST00000396096 DCLRE1CQ96SD1 692 aaKnown RBP15.46■□□□□ 0.06
NUP50-202ENST00000396096 TTYH1Q9H313 450 aaPredicted RBP15.46■□□□□ 0.06
NUP50-202ENST00000396096 RERGLQ9H628 205 aa15.46■□□□□ 0.06
NUP50-202ENST00000396096 ISG20L2Q9H9L3 353 aaKnown RBP15.46■□□□□ 0.06
NUP50-202ENST00000396096 PDE7BQ9NP56 450 aa15.46■□□□□ 0.06
NUP50-202ENST00000396096 ICAM5Q9UMF0 924 aa15.46■□□□□ 0.06
NUP50-202ENST00000396096 PCDHGB2Q9Y5G2 931 aa15.46■□□□□ 0.06
NUP50-202ENST00000396096 IGHV5-51A0A0C4DH38 117 aa15.45■□□□□ 0.06
NUP50-202ENST00000396096 SERINC4A6NH21 518 aa15.45■□□□□ 0.06
NUP50-202ENST00000396096 LMO7DNF2Z398 122 aa15.45■□□□□ 0.06
NUP50-202ENST00000396096 SEC14L5O43304 696 aa15.45■□□□□ 0.06
NUP50-202ENST00000396096 IL9P15248 144 aa15.45■□□□□ 0.06
NUP50-202ENST00000396096 ZNF3P17036 446 aa15.45■□□□□ 0.06
NUP50-202ENST00000396096 CAPZA2P47755 286 aa15.45■□□□□ 0.06
NUP50-202ENST00000396096 GPR143P51810 404 aa15.45■□□□□ 0.06
NUP50-202ENST00000396096 EPHA4P54764 986 aa15.45■□□□□ 0.06
NUP50-202ENST00000396096 GFERP55789 205 aa15.45■□□□□ 0.06
NUP50-202ENST00000396096 KIRREL2Q6UWL6 708 aa15.45■□□□□ 0.06
NUP50-202ENST00000396096 GDPD1Q8N9F7 314 aa15.45■□□□□ 0.06
NUP50-202ENST00000396096 OR7G1Q8NGA0 311 aa15.45■□□□□ 0.06
NUP50-202ENST00000396096 ARSGQ96EG1 525 aa15.45■□□□□ 0.06
NUP50-202ENST00000396096 TMED9Q9BVK6 235 aa15.45■□□□□ 0.06
NUP50-202ENST00000396096 MIR1-1HGQ9H1L0 117 aa15.45■□□□□ 0.06
NUP50-202ENST00000396096 TBC1D17Q9HA65 648 aa15.45■□□□□ 0.06
NUP50-202ENST00000396096 LRIT1Q9P2V4 623 aa15.45■□□□□ 0.06
NUP50-202ENST00000396096 PRODH2Q9UF12 536 aa15.45■□□□□ 0.06
NUP50-202ENST00000396096 TMEM184BQ9Y519 407 aaPredicted RBP15.45■□□□□ 0.06
NUP50-202ENST00000396096 DAPL1A0PJW8 107 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 ZC3H12DA2A288 527 aaKnown RBP15.44■□□□□ 0.06
NUP50-202ENST00000396096 SNPHO15079 494 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 RNF13O43567 381 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 PPP1R3DO95685 299 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 IL7P13232 177 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 CFL1P23528 166 aaKnown RBP15.44■□□□□ 0.06
NUP50-202ENST00000396096 PPP3R1P63098 170 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 ZMAT1Q5H9K5 638 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 B3GLCTQ6Y288 498 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 TMEM91Q6ZNR0 172 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 LSRQ86X29 649 aaPredicted RBP15.44■□□□□ 0.06
NUP50-202ENST00000396096 ZNF440Q8IYI8 595 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 DEFB119Q8N690 84 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 ZSCAN1Q8NBB4 408 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 TGM7Q96PF1 710 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 HDHD5Q9BXW7 423 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 ADGRL4Q9HBW9 690 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 IRAK4Q9NWZ3 460 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 SOHLH2Q9NX45 425 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 RPS6KB2Q9UBS0 482 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 A0A087WUJ7 227 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 GTPBP1O00178 669 aaKnown RBP15.44■□□□□ 0.06
NUP50-202ENST00000396096 CASKO14936 926 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 RGS9O75916 674 aaPredicted RBP15.44■□□□□ 0.06
NUP50-202ENST00000396096 CSTAP01040 98 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 IFNGP01579 166 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 SBK2P0C263 348 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 CD1CP29017 333 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 NOS3P29474 1203 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 NXPH1P58417 271 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 HNRNPKP61978 463 aaKnown RBP eCLIP15.44■□□□□ 0.06
NUP50-202ENST00000396096 CRYZQ08257 329 aaKnown RBP15.44■□□□□ 0.06
NUP50-202ENST00000396096 POU4F2Q12837 409 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 CRMP1Q14194 572 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 GRM7Q14831 915 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 BAK1Q16611 211 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 C14orf28Q4W4Y0 310 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 KLHL12Q53G59 568 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 FAM131AQ6UXB0 335 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 GATAD2AQ86YP4 633 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 GPALPP1Q8IXQ4 340 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 FAM71CQ8NEG0 241 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 NEIL3Q8TAT5 605 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 HPS1Q92902 700 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 ZDHHC12Q96GR4 267 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 AHCYL2Q96HN2 611 aaKnown RBP15.44■□□□□ 0.06
NUP50-202ENST00000396096 CCNL2Q96S94 520 aaPredicted RBP15.44■□□□□ 0.06
NUP50-202ENST00000396096 SPRTNQ9H040 489 aaPredicted RBP15.44■□□□□ 0.06
NUP50-202ENST00000396096 SYNDIG1Q9H7V2 258 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 MKKSQ9NPJ1 570 aaPredicted RBP15.44■□□□□ 0.06
NUP50-202ENST00000396096 TRIM36Q9NQ86 728 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 CHRNA9Q9UGM1 479 aa15.44■□□□□ 0.06
NUP50-202ENST00000396096 CA14Q9ULX7 337 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms