RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 HHATLQ9HCP6 504 aa18.61■□□□□ 0.57
VCPKMT-202ENST00000395860 SH2D2AQ9NP31 389 aa18.61■□□□□ 0.57
VCPKMT-202ENST00000395860 FAM118AQ9NWS6 357 aa18.61■□□□□ 0.57
VCPKMT-202ENST00000395860 CNIH4Q9P003 139 aa18.61■□□□□ 0.57
VCPKMT-202ENST00000395860 MSRB2Q9Y3D2 182 aa18.61■□□□□ 0.57
VCPKMT-202ENST00000395860 PIP5K1CO60331 668 aa18.6■□□□□ 0.57
VCPKMT-202ENST00000395860 SLC1A3P43003 542 aa18.6■□□□□ 0.57
VCPKMT-202ENST00000395860 HLCSP50747 726 aa18.6■□□□□ 0.57
VCPKMT-202ENST00000395860 ADARB1P78563 741 aaKnown RBP18.6■□□□□ 0.57
VCPKMT-202ENST00000395860 OC90Q02509 493 aaPredicted RBP18.6■□□□□ 0.57
VCPKMT-202ENST00000395860 CDC20Q12834 499 aa18.6■□□□□ 0.57
VCPKMT-202ENST00000395860 TOMM34Q15785 309 aaPredicted RBP18.6■□□□□ 0.57
VCPKMT-202ENST00000395860 CRTC2Q53ET0 693 aaPredicted RBP18.6■□□□□ 0.57
VCPKMT-202ENST00000395860 TTC33Q6PID6 262 aaPredicted RBP18.6■□□□□ 0.57
VCPKMT-202ENST00000395860 KLHL17Q6TDP4 642 aa18.6■□□□□ 0.57
VCPKMT-202ENST00000395860 LINC00114Q6XXX2 140 aa18.6■□□□□ 0.57
VCPKMT-202ENST00000395860 GNPDA2Q8TDQ7 276 aa18.6■□□□□ 0.57
VCPKMT-202ENST00000395860 CNBD2Q96M20 576 aa18.6■□□□□ 0.57
VCPKMT-202ENST00000395860 UCK2Q9BZX2 261 aa18.6■□□□□ 0.57
VCPKMT-202ENST00000395860 MED11Q9P086 117 aa18.6■□□□□ 0.57
VCPKMT-202ENST00000395860 ENOPH1Q9UHY7 261 aa18.6■□□□□ 0.57
VCPKMT-202ENST00000395860 POLHQ9Y253 713 aa18.6■□□□□ 0.57
VCPKMT-202ENST00000395860 MED31Q9Y3C7 131 aa18.6■□□□□ 0.57
VCPKMT-202ENST00000395860 MED13Q9UHV7 2174 aa18.6■□□□□ 0.57
VCPKMT-202ENST00000395860 ANKUB1A6NFN9 424 aa18.6■□□□□ 0.57
VCPKMT-202ENST00000395860 GNB5O14775 395 aa18.6■□□□□ 0.57
VCPKMT-202ENST00000395860 KLK10O43240 276 aa18.6■□□□□ 0.57
VCPKMT-202ENST00000395860 GP1BBP13224 206 aa18.6■□□□□ 0.57
VCPKMT-202ENST00000395860 MSX1P28360 303 aa18.6■□□□□ 0.57
VCPKMT-202ENST00000395860 POLR2IP36954 125 aaKnown RBP18.6■□□□□ 0.57
VCPKMT-202ENST00000395860 CASRP41180 1078 aa18.6■□□□□ 0.57
VCPKMT-202ENST00000395860 RBM34P42696 430 aaKnown RBP18.6■□□□□ 0.57
VCPKMT-202ENST00000395860 QPRTQ15274 297 aa18.6■□□□□ 0.57
VCPKMT-202ENST00000395860 TTC23Q5W5X9 447 aa18.6■□□□□ 0.57
VCPKMT-202ENST00000395860 FAM46AQ96IP4 442 aaKnown RBP18.6■□□□□ 0.57
VCPKMT-202ENST00000395860 ANGPTL4Q9BY76 406 aa18.6■□□□□ 0.57
VCPKMT-202ENST00000395860 ING2Q9H160 280 aa18.6■□□□□ 0.57
VCPKMT-202ENST00000395860 TAS2R10Q9NYW0 307 aa18.6■□□□□ 0.57
VCPKMT-202ENST00000395860 A0A087WUJ7 227 aa18.59■□□□□ 0.57
VCPKMT-202ENST00000395860 IGLV3-32A0A0A0MS00 114 aa18.59■□□□□ 0.57
VCPKMT-202ENST00000395860 ELOA3DA6NLF2 546 aaPredicted RBP18.59■□□□□ 0.57
VCPKMT-202ENST00000395860 KPNA4O00629 521 aaPredicted RBP18.59■□□□□ 0.57
VCPKMT-202ENST00000395860 TLX3O43711 291 aaPredicted RBP18.59■□□□□ 0.57
VCPKMT-202ENST00000395860 CDC40O60508 579 aaKnown RBP eCLIP18.59■□□□□ 0.57
VCPKMT-202ENST00000395860 P04436 131 aa18.59■□□□□ 0.57
VCPKMT-202ENST00000395860 PNMTP11086 282 aa18.59■□□□□ 0.57
VCPKMT-202ENST00000395860 MST1P26927 711 aa18.59■□□□□ 0.57
VCPKMT-202ENST00000395860 OMPP47874 163 aa18.59■□□□□ 0.57
VCPKMT-202ENST00000395860 NPRL3Q12980 569 aa18.59■□□□□ 0.57
VCPKMT-202ENST00000395860 ELOA3BQ3SY89 546 aa18.59■□□□□ 0.57
VCPKMT-202ENST00000395860 MEX3DQ86XN8 651 aaKnown RBP18.59■□□□□ 0.57
VCPKMT-202ENST00000395860 PARP8Q8N3A8 854 aa18.59■□□□□ 0.57
VCPKMT-202ENST00000395860 ELOA3Q8NG57 546 aa18.59■□□□□ 0.57
VCPKMT-202ENST00000395860 PFN4Q8NHR9 129 aa18.59■□□□□ 0.57
VCPKMT-202ENST00000395860 ZNF524Q96C55 264 aa18.59■□□□□ 0.57
VCPKMT-202ENST00000395860 ZNF570Q96NI8 536 aa18.59■□□□□ 0.57
VCPKMT-202ENST00000395860 CCNL2Q96S94 520 aaPredicted RBP18.59■□□□□ 0.57
VCPKMT-202ENST00000395860 ZNF426Q9BUY5 554 aa18.59■□□□□ 0.57
VCPKMT-202ENST00000395860 GABARAPL3Q9BY60 117 aa18.59■□□□□ 0.57
VCPKMT-202ENST00000395860 ANKRD60Q9BZ19 345 aa18.59■□□□□ 0.57
VCPKMT-202ENST00000395860 LOC100130705A0A1B0GUX0 176 aa18.58■□□□□ 0.57
VCPKMT-202ENST00000395860 A6NL46 340 aa18.58■□□□□ 0.57
VCPKMT-202ENST00000395860 GSTM3P21266 225 aa18.58■□□□□ 0.57
VCPKMT-202ENST00000395860 TACR3P29371 465 aa18.58■□□□□ 0.57
VCPKMT-202ENST00000395860 SOX8P57073 446 aa18.58■□□□□ 0.57
VCPKMT-202ENST00000395860 ALDH6A1Q02252 535 aaKnown RBP18.58■□□□□ 0.57
VCPKMT-202ENST00000395860 RAPSNQ13702 412 aa18.58■□□□□ 0.57
VCPKMT-202ENST00000395860 MDGA2Q7Z553 956 aa18.58■□□□□ 0.57
VCPKMT-202ENST00000395860 ATG4DQ86TL0 474 aaPredicted RBP18.58■□□□□ 0.57
VCPKMT-202ENST00000395860 LSRQ86X29 649 aaPredicted RBP18.58■□□□□ 0.57
VCPKMT-202ENST00000395860 CHERPQ8IWX8 916 aaKnown RBP18.58■□□□□ 0.57
VCPKMT-202ENST00000395860 TMEM234Q8WY98 164 aa18.58■□□□□ 0.57
VCPKMT-202ENST00000395860 FRMD6Q96NE9 622 aa18.58■□□□□ 0.57
VCPKMT-202ENST00000395860 ADAM19Q9H013 955 aa18.58■□□□□ 0.57
VCPKMT-202ENST00000395860 DSN1Q9H410 356 aa18.58■□□□□ 0.57
VCPKMT-202ENST00000395860 SACM1LQ9NTJ5 587 aa18.58■□□□□ 0.57
VCPKMT-202ENST00000395860 GPR83Q9NYM4 423 aa18.58■□□□□ 0.57
VCPKMT-202ENST00000395860 B4DXG7 233 aa18.58■□□□□ 0.56
VCPKMT-202ENST00000395860 CLIC3O95833 236 aa18.58■□□□□ 0.56
VCPKMT-202ENST00000395860 F10P00742 488 aa18.58■□□□□ 0.56
VCPKMT-202ENST00000395860 GNAO1P09471 354 aa18.58■□□□□ 0.56
VCPKMT-202ENST00000395860 IFI30P13284 250 aa18.58■□□□□ 0.56
VCPKMT-202ENST00000395860 GPR4P46093 362 aa18.58■□□□□ 0.56
VCPKMT-202ENST00000395860 PRKCDQ05655 676 aa18.58■□□□□ 0.56
VCPKMT-202ENST00000395860 COX10Q12887 443 aa18.58■□□□□ 0.56
VCPKMT-202ENST00000395860 INPP5JQ15735 1006 aaPredicted RBP18.58■□□□□ 0.56
VCPKMT-202ENST00000395860 AGAP7PQ5VUJ5 663 aa18.58■□□□□ 0.56
VCPKMT-202ENST00000395860 LINC00696Q6ZRV3 163 aa18.58■□□□□ 0.56
VCPKMT-202ENST00000395860 CDK20Q8IZL9 346 aa18.58■□□□□ 0.56
VCPKMT-202ENST00000395860 AGAP4Q96P64 663 aa18.58■□□□□ 0.56
VCPKMT-202ENST00000395860 GPA33Q99795 319 aa18.58■□□□□ 0.56
VCPKMT-202ENST00000395860 UTP23Q9BRU9 249 aaKnown RBP18.58■□□□□ 0.56
VCPKMT-202ENST00000395860 DPH1Q9BZG8 443 aa18.58■□□□□ 0.56
VCPKMT-202ENST00000395860 GRIP2Q9C0E4 1043 aa18.58■□□□□ 0.56
VCPKMT-202ENST00000395860 C12orf10Q9HB07 376 aa18.58■□□□□ 0.56
VCPKMT-202ENST00000395860 LRFN1Q9P244 771 aa18.58■□□□□ 0.56
VCPKMT-202ENST00000395860 FREM2Q5SZK8 3169 aa18.57■□□□□ 0.56
VCPKMT-202ENST00000395860 ANKRD33BA6NCL7 494 aa18.57■□□□□ 0.56
VCPKMT-202ENST00000395860 SLC16A6O15403 523 aa18.57■□□□□ 0.56
VCPKMT-202ENST00000395860 OSMP13725 252 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms