RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 ATP12AP54707 1039 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 WNT4P56705 351 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 HSD17B7P56937 341 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 FOXK2Q01167 660 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 RHAGQ02094 409 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 RUNX1T1Q06455 604 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 TMEM201Q5SNT2 666 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 DCDC5Q6ZRR9 648 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 ARHGEF39Q8N4T4 335 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 SDR9C7Q8NEX9 313 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 OR52E2Q8NGJ4 325 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 C1orf216Q8TAB5 229 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 S100ZQ8WXG8 99 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 ZNF559Q9BR84 538 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 G6PC3Q9BUM1 346 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 TAPBPLQ9BX59 468 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 ISG20L2Q9H9L3 353 aaKnown RBP10.25□□□□□ -0.77
TCOF1-203ENST00000394269 ZNF304Q9HCX3 659 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 C14orf119Q9NWQ9 140 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 ERVK13-1Q9NX77 482 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 CTSFQ9UBX1 484 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 PCDHGA3Q9Y5H0 932 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 CHD8Q9HCK8 2581 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 C2orf92A0A1B0GVN3 265 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 C12orf71A8MTZ7 269 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 PRR23D1E9PI22 279 aaPredicted RBP10.25□□□□□ -0.77
TCOF1-203ENST00000394269 BOLA2-SMG1P6H3BVE0 249 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 RCBTB2O95199 551 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 PRR23D2P0DMB1 279 aaPredicted RBP10.25□□□□□ -0.77
TCOF1-203ENST00000394269 PIPP12273 146 aaPredicted RBP10.25□□□□□ -0.77
TCOF1-203ENST00000394269 FXYD6P3P58550 94 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 TEKQ02763 1124 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 RAB40BQ12829 278 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 CRMP1Q14194 572 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 FAM69BQ5VUD6 431 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 LANCL3Q6ZV70 420 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 FAM174AQ8TBP5 190 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 PTPMT1Q8WUK0 201 aaPredicted RBP10.25□□□□□ -0.77
TCOF1-203ENST00000394269 SPRYD4Q8WW59 207 aaPredicted RBP10.25□□□□□ -0.77
TCOF1-203ENST00000394269 NR4A3Q92570 626 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 FN3KQ9H479 309 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 AKIP1Q9NQ31 210 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 TESQ9UGI8 421 aaKnown RBP10.25□□□□□ -0.77
TCOF1-203ENST00000394269 CLDN16Q9Y5I7 305 aa10.25□□□□□ -0.77
TCOF1-203ENST00000394269 C2orf72A6NCS6 295 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 LALBAP00709 142 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 LIMS3P0CW19 117 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 LIMS4P0CW20 117 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 FBLP22087 321 aaKnown RBP10.24□□□□□ -0.77
TCOF1-203ENST00000394269 ACAA2P42765 397 aaKnown RBP10.24□□□□□ -0.77
TCOF1-203ENST00000394269 SLC1A3P43003 542 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 CD226Q15762 336 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 SPANXN2Q5MJ10 180 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 OR8H2Q8N162 312 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 SIRT6Q8N6T7 355 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 COX4I2Q96KJ9 171 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 ELF4Q99607 663 aaPredicted RBP10.24□□□□□ -0.77
TCOF1-203ENST00000394269 MMP27Q9H306 513 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 ANKRD19PQ9H560 264 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 THADAQ6YHU6 1953 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 DAPL1A0PJW8 107 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 SERINC4A6NH21 518 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 METTL15A6NJ78 407 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 CD8B2A6NJW9 211 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 RIIAD1A6NNX1 92 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 C10orf142B7Z368 130 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 SCDO00767 359 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 IMPA2O14732 288 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 OIP5O43482 229 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 HCRTR2O43614 444 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 SNX4O95219 450 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 CD8BP10966 210 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 GLB1P16278 677 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 DRD5P21918 477 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 SDC2P34741 201 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 NAA10P41227 235 aaPredicted RBP10.24□□□□□ -0.77
TCOF1-203ENST00000394269 LYSMD4Q5XG99 296 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 GUSBP11Q6P575 273 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 POC5Q8NA72 575 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 POGLUT1Q8NBL1 392 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 SLC37A3Q8NCC5 494 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 FAM83FQ8NEG4 500 aaPredicted RBP10.24□□□□□ -0.77
TCOF1-203ENST00000394269 BCL7BQ9BQE9 202 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 TRIM2Q9C040 744 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 TWSG1Q9GZX9 223 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 IER3IP1Q9Y5U9 82 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 A0A0B4J2E0 115 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 A0A1B0GX12 115 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 PSMD9O00233 223 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 NUDT21O43809 227 aaKnown RBP10.24□□□□□ -0.77
TCOF1-203ENST00000394269 GRPRP30550 384 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 GABRA4P48169 554 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 HNRNPA0Q13151 305 aaKnown RBP10.24□□□□□ -0.77
TCOF1-203ENST00000394269 AADACL4Q5VUY2 407 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 GARNL3Q5VVW2 1013 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 UTS2BQ765I0 119 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 SLC22A16Q86VW1 577 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 UFD1Q92890 307 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 ZMYND19Q96E35 227 aaPredicted RBP10.24□□□□□ -0.77
TCOF1-203ENST00000394269 VMP1Q96GC9 406 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms