RNA–Protein interactions for RNA: ENST00000393370.6

PTPA-207, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-207ENST00000393370 LHX3Q9UBR4 397 aa15.88■□□□□ 0.13
PTPA-207ENST00000393370 FCF1Q9Y324 198 aaKnown RBP15.88■□□□□ 0.13
PTPA-207ENST00000393370 PRAMEF27A3QJZ7 478 aa15.88■□□□□ 0.13
PTPA-207ENST00000393370 OR6C76A6NM76 312 aa15.88■□□□□ 0.13
PTPA-207ENST00000393370 TXNL1O43396 289 aa15.88■□□□□ 0.13
PTPA-207ENST00000393370 RAD1O60671 282 aa15.88■□□□□ 0.13
PTPA-207ENST00000393370 TYRP1P17643 537 aa15.88■□□□□ 0.13
PTPA-207ENST00000393370 CRYBB1P53674 252 aaPredicted RBP15.88■□□□□ 0.13
PTPA-207ENST00000393370 STXBP1P61764 594 aaKnown RBP15.88■□□□□ 0.13
PTPA-207ENST00000393370 TSSK4Q6SA08 328 aa15.88■□□□□ 0.13
PTPA-207ENST00000393370 NAA40Q86UY6 237 aa15.88■□□□□ 0.13
PTPA-207ENST00000393370 MUC20Q8N307 709 aaPredicted RBP15.88■□□□□ 0.13
PTPA-207ENST00000393370 BBS10Q8TAM1 723 aa15.88■□□□□ 0.13
PTPA-207ENST00000393370 SETD7Q8WTS6 366 aaKnown RBP15.88■□□□□ 0.13
PTPA-207ENST00000393370 CLP1Q92989 425 aaKnown RBP15.88■□□□□ 0.13
PTPA-207ENST00000393370 NEURL3Q96EH8 262 aa15.88■□□□□ 0.13
PTPA-207ENST00000393370 PGLYRP3Q96LB9 341 aa15.88■□□□□ 0.13
PTPA-207ENST00000393370 TMEM185BQ9H7F4 350 aa15.88■□□□□ 0.13
PTPA-207ENST00000393370 MED20Q9H944 212 aa15.88■□□□□ 0.13
PTPA-207ENST00000393370 TRAV14DV4A0A0A6YYC5 116 aa15.88■□□□□ 0.13
PTPA-207ENST00000393370 DAPL1A0PJW8 107 aa15.88■□□□□ 0.13
PTPA-207ENST00000393370 ANKRD20A5PA0PJZ0 165 aa15.88■□□□□ 0.13
PTPA-207ENST00000393370 POM121BA6NF01 834 aa15.88■□□□□ 0.13
PTPA-207ENST00000393370 M0QZQ0 153 aa15.88■□□□□ 0.13
PTPA-207ENST00000393370 KLK1P06870 262 aa15.88■□□□□ 0.13
PTPA-207ENST00000393370 IL3P08700 152 aa15.88■□□□□ 0.13
PTPA-207ENST00000393370 LAG3P18627 525 aa15.88■□□□□ 0.13
PTPA-207ENST00000393370 GPX4P36969 197 aaPredicted RBP15.88■□□□□ 0.13
PTPA-207ENST00000393370 CDH4P55283 916 aa15.88■□□□□ 0.13
PTPA-207ENST00000393370 TSPAN31Q12999 210 aa15.88■□□□□ 0.13
PTPA-207ENST00000393370 RAB33AQ14088 237 aa15.88■□□□□ 0.13
PTPA-207ENST00000393370 EIF2S3LQ2VIR3 472 aaKnown RBP15.88■□□□□ 0.13
PTPA-207ENST00000393370 UBE2NLQ5JXB2 153 aa15.88■□□□□ 0.13
PTPA-207ENST00000393370 OLFML2AQ68BL7 652 aa15.88■□□□□ 0.13
PTPA-207ENST00000393370 TMEM71Q6P5X7 295 aa15.88■□□□□ 0.13
PTPA-207ENST00000393370 SLC36A1Q7Z2H8 476 aa15.88■□□□□ 0.13
PTPA-207ENST00000393370 ZNF546Q86UE3 836 aa15.88■□□□□ 0.13
PTPA-207ENST00000393370 DNAAF1Q8NEP3 725 aa15.88■□□□□ 0.13
PTPA-207ENST00000393370 OR10H4Q8NGA5 316 aa15.88■□□□□ 0.13
PTPA-207ENST00000393370 BRIX1Q8TDN6 353 aaKnown RBP15.88■□□□□ 0.13
PTPA-207ENST00000393370 ADARB2Q9NS39 739 aaKnown RBP15.88■□□□□ 0.13
PTPA-207ENST00000393370 ZMIZ1Q9ULJ6 1067 aa15.88■□□□□ 0.13
PTPA-207ENST00000393370 ACTL6AO96019 429 aa15.87■□□□□ 0.13
PTPA-207ENST00000393370 ARFIP1P53367 373 aa15.87■□□□□ 0.13
PTPA-207ENST00000393370 PLBD1Q6P4A8 553 aa15.87■□□□□ 0.13
PTPA-207ENST00000393370 C11orf88Q6PI97 169 aa15.87■□□□□ 0.13
PTPA-207ENST00000393370 PHOSPHO2Q8TCD6 241 aa15.87■□□□□ 0.13
PTPA-207ENST00000393370 SMAP2Q8WU79 429 aaPredicted RBP15.87■□□□□ 0.13
PTPA-207ENST00000393370 FCAMRQ8WWV6 532 aa15.87■□□□□ 0.13
PTPA-207ENST00000393370 KCNK12Q9HB15 430 aa15.87■□□□□ 0.13
PTPA-207ENST00000393370 OR2T1O43869 369 aa15.87■□□□□ 0.13
PTPA-207ENST00000393370 SPAM1P38567 509 aa15.87■□□□□ 0.13
PTPA-207ENST00000393370 TAF10Q12962 218 aa15.87■□□□□ 0.13
PTPA-207ENST00000393370 DEFB115Q30KQ5 88 aa15.87■□□□□ 0.13
PTPA-207ENST00000393370 CCSMST1Q4G0I0 132 aa15.87■□□□□ 0.13
PTPA-207ENST00000393370 ARSIQ5FYB1 569 aa15.87■□□□□ 0.13
PTPA-207ENST00000393370 C10orf91Q5T1B1 145 aa15.87■□□□□ 0.13
PTPA-207ENST00000393370 RNF219Q5W0B1 726 aaPredicted RBP15.87■□□□□ 0.13
PTPA-207ENST00000393370 C16orf59Q7L2K0 433 aa15.87■□□□□ 0.13
PTPA-207ENST00000393370 SKA3Q8IX90 412 aa15.87■□□□□ 0.13
PTPA-207ENST00000393370 TRMT2BQ96GJ1 504 aaKnown RBP15.87■□□□□ 0.13
PTPA-207ENST00000393370 PRRC1Q96M27 445 aa15.87■□□□□ 0.13
PTPA-207ENST00000393370 TRMT61BQ9BVS5 477 aaKnown RBP15.87■□□□□ 0.13
PTPA-207ENST00000393370 TAS2R10Q9NYW0 307 aa15.87■□□□□ 0.13
PTPA-207ENST00000393370 RNF181Q9P0P0 153 aa15.87■□□□□ 0.13
PTPA-207ENST00000393370 CARHSP1Q9Y2V2 147 aaKnown RBP15.87■□□□□ 0.13
PTPA-207ENST00000393370 RFPL4AA6NLU0 287 aa15.86■□□□□ 0.13
PTPA-207ENST00000393370 ZNF729A6NN14 1252 aaPredicted RBP15.86■□□□□ 0.13
PTPA-207ENST00000393370 COLCA2A8K830 154 aa15.86■□□□□ 0.13
PTPA-207ENST00000393370 RFPL4AL1F8VTS6 287 aa15.86■□□□□ 0.13
PTPA-207ENST00000393370 CACNB4O00305 520 aaPredicted RBP15.86■□□□□ 0.13
PTPA-207ENST00000393370 FLRT2O43155 660 aa15.86■□□□□ 0.13
PTPA-207ENST00000393370 PRKRAO75569 313 aaKnown RBP15.86■□□□□ 0.13
PTPA-207ENST00000393370 REM1O75628 298 aa15.86■□□□□ 0.13
PTPA-207ENST00000393370 GCGRP47871 477 aa15.86■□□□□ 0.13
PTPA-207ENST00000393370 KRT33BQ14525 404 aa15.86■□□□□ 0.13
PTPA-207ENST00000393370 TMEM44Q2T9K0 475 aa15.86■□□□□ 0.13
PTPA-207ENST00000393370 JMJD6Q6NYC1 403 aaPredicted RBP15.86■□□□□ 0.13
PTPA-207ENST00000393370 GHSRQ92847 366 aa15.86■□□□□ 0.13
PTPA-207ENST00000393370 EXOSC8Q96B26 276 aaKnown RBP15.86■□□□□ 0.13
PTPA-207ENST00000393370 MIEF1Q9NQG6 463 aa15.86■□□□□ 0.13
PTPA-207ENST00000393370 ACSS1Q9NUB1 689 aaPredicted RBP15.86■□□□□ 0.13
PTPA-207ENST00000393370 CEP350Q5VT06 3117 aa15.86■□□□□ 0.13
PTPA-207ENST00000393370 A0A1W2PPE3 182 aa15.86■□□□□ 0.13
PTPA-207ENST00000393370 J3QLW9 94 aa15.86■□□□□ 0.13
PTPA-207ENST00000393370 STX11O75558 287 aa15.86■□□□□ 0.13
PTPA-207ENST00000393370 RLN1P04808 185 aa15.86■□□□□ 0.13
PTPA-207ENST00000393370 HEXAP06865 529 aa15.86■□□□□ 0.13
PTPA-207ENST00000393370 ZNF19P17023 458 aa15.86■□□□□ 0.13
PTPA-207ENST00000393370 ACTR1AP61163 376 aa15.86■□□□□ 0.13
PTPA-207ENST00000393370 RHOAP61586 193 aa15.86■□□□□ 0.13
PTPA-207ENST00000393370 CDKN3Q16667 212 aa15.86■□□□□ 0.13
PTPA-207ENST00000393370 PGGHGQ32M88 737 aa15.86■□□□□ 0.13
PTPA-207ENST00000393370 BEX5Q5H9J7 111 aa15.86■□□□□ 0.13
PTPA-207ENST00000393370 OR2B11Q5JQS5 317 aa15.86■□□□□ 0.13
PTPA-207ENST00000393370 ZNF425Q6IV72 752 aa15.86■□□□□ 0.13
PTPA-207ENST00000393370 FAM199XQ6PEV8 388 aaPredicted RBP15.86■□□□□ 0.13
PTPA-207ENST00000393370 AGTRAPQ6RW13 159 aa15.86■□□□□ 0.13
PTPA-207ENST00000393370 DLK2Q6UY11 383 aa15.86■□□□□ 0.13
PTPA-207ENST00000393370 C6orf120Q7Z4R8 191 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms