RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 L3HYPDHQ96EM0 354 aa-0.11□□□□□ -2.43
RNU6-239P-201ENST00000390990 PGLYRP4Q96LB8 373 aa-0.11□□□□□ -2.43
RNU6-239P-201ENST00000390990 PARK7Q99497 189 aaKnown RBP-0.11□□□□□ -2.43
RNU6-239P-201ENST00000390990 DOK1Q99704 481 aa-0.11□□□□□ -2.43
RNU6-239P-201ENST00000390990 NAPBQ9H115 298 aa-0.11□□□□□ -2.43
RNU6-239P-201ENST00000390990 COG4Q9H9E3 785 aa-0.11□□□□□ -2.43
RNU6-239P-201ENST00000390990 TMEM161AQ9NX61 479 aa-0.11□□□□□ -2.43
RNU6-239P-201ENST00000390990 FBXL5Q9UKA1 691 aa-0.11□□□□□ -2.43
RNU6-239P-201ENST00000390990 HEBP2Q9Y5Z4 205 aa-0.11□□□□□ -2.43
RNU6-239P-201ENST00000390990 ARHGEF37A1IGU5 675 aa-0.12□□□□□ -2.43
RNU6-239P-201ENST00000390990 H0YL77 283 aa-0.12□□□□□ -2.43
RNU6-239P-201ENST00000390990 CHEK1O14757 476 aa-0.12□□□□□ -2.43
RNU6-239P-201ENST00000390990 ARPC1BO15143 372 aaKnown RBP-0.12□□□□□ -2.43
RNU6-239P-201ENST00000390990 SLC16A8O95907 504 aa-0.12□□□□□ -2.43
RNU6-239P-201ENST00000390990 LALBAP00709 142 aa-0.12□□□□□ -2.43
RNU6-239P-201ENST00000390990 GH1P01241 217 aa-0.12□□□□□ -2.43
RNU6-239P-201ENST00000390990 SERPINF2P08697 491 aa-0.12□□□□□ -2.43
RNU6-239P-201ENST00000390990 TNFSF9P41273 254 aa-0.12□□□□□ -2.43
RNU6-239P-201ENST00000390990 ASMTP46597 345 aa-0.12□□□□□ -2.43
RNU6-239P-201ENST00000390990 EMDP50402 254 aa-0.12□□□□□ -2.43
RNU6-239P-201ENST00000390990 RPS11P62280 158 aaKnown RBP eCLIP-0.12□□□□□ -2.43
RNU6-239P-201ENST00000390990 CCDC173Q0VFZ6 552 aa-0.12□□□□□ -2.43
RNU6-239P-201ENST00000390990 CFAP58Q5T655 872 aa-0.12□□□□□ -2.43
RNU6-239P-201ENST00000390990 HIST2H2AA3Q6FI13 130 aa-0.12□□□□□ -2.43
RNU6-239P-201ENST00000390990 LEG1Q6P5S2 330 aa-0.12□□□□□ -2.43
RNU6-239P-201ENST00000390990 LYPD2Q6UXB3 125 aa-0.12□□□□□ -2.43
RNU6-239P-201ENST00000390990 FAM92BQ6ZTR7 304 aa-0.12□□□□□ -2.43
RNU6-239P-201ENST00000390990 RIMKLAQ8IXN7 391 aa-0.12□□□□□ -2.43
RNU6-239P-201ENST00000390990 ZNF679Q8IYX0 411 aa-0.12□□□□□ -2.43
RNU6-239P-201ENST00000390990 NHLRC2Q8NBF2 726 aa-0.12□□□□□ -2.43
RNU6-239P-201ENST00000390990 OR51S1Q8NGJ8 323 aa-0.12□□□□□ -2.43
RNU6-239P-201ENST00000390990 MS4A14Q96JA4 679 aa-0.12□□□□□ -2.43
RNU6-239P-201ENST00000390990 CYP2S1Q96SQ9 504 aa-0.12□□□□□ -2.43
RNU6-239P-201ENST00000390990 KLHDC3Q9BQ90 382 aa-0.12□□□□□ -2.43
RNU6-239P-201ENST00000390990 TIMM29Q9BSF4 260 aa-0.12□□□□□ -2.43
RNU6-239P-201ENST00000390990 PPDPFQ9H3Y8 114 aa-0.12□□□□□ -2.43
RNU6-239P-201ENST00000390990 RABEP2Q9H5N1 569 aa-0.12□□□□□ -2.43
RNU6-239P-201ENST00000390990 CLMPQ9H6B4 373 aa-0.12□□□□□ -2.43
RNU6-239P-201ENST00000390990 ZNRD1Q9P1U0 126 aa-0.12□□□□□ -2.43
RNU6-239P-201ENST00000390990 APPL1Q9UKG1 709 aa-0.12□□□□□ -2.43
RNU6-239P-201ENST00000390990 MRPS33Q9Y291 106 aaKnown RBP-0.12□□□□□ -2.43
RNU6-239P-201ENST00000390990 MRPS2Q9Y399 296 aaKnown RBP-0.12□□□□□ -2.43
RNU6-239P-201ENST00000390990 MN1Q10571 1320 aaPredicted RBP-0.13□□□□□ -2.43
RNU6-239P-201ENST00000390990 GPATCH8Q9UKJ3 1502 aaKnown RBP-0.13□□□□□ -2.43
RNU6-239P-201ENST00000390990 SCN1AP35498 2009 aa-0.13□□□□□ -2.43
RNU6-239P-201ENST00000390990 IGHV5-51A0A0C4DH38 117 aa-0.13□□□□□ -2.43
RNU6-239P-201ENST00000390990 SGK1O00141 431 aa-0.13□□□□□ -2.43
RNU6-239P-201ENST00000390990 IFIT3O14879 490 aaKnown RBP-0.13□□□□□ -2.43
RNU6-239P-201ENST00000390990 BUB1O43683 1085 aa-0.13□□□□□ -2.43
RNU6-239P-201ENST00000390990 TBX19O60806 448 aa-0.13□□□□□ -2.43
RNU6-239P-201ENST00000390990 SFTPBP07988 381 aa-0.13□□□□□ -2.43
RNU6-239P-201ENST00000390990 SELENOTP62341 195 aa-0.13□□□□□ -2.43
RNU6-239P-201ENST00000390990 ESRRGP62508 458 aa-0.13□□□□□ -2.43
RNU6-239P-201ENST00000390990 CALD1Q05682 793 aaKnown RBP-0.13□□□□□ -2.43
RNU6-239P-201ENST00000390990 ZP4Q12836 540 aa-0.13□□□□□ -2.43
RNU6-239P-201ENST00000390990 KLF17Q5JT82 389 aaPredicted RBP-0.13□□□□□ -2.43
RNU6-239P-201ENST00000390990 NKAIN2Q5VXU1 208 aa-0.13□□□□□ -2.43
RNU6-239P-201ENST00000390990 RPUSD3Q6P087 351 aaKnown RBP-0.13□□□□□ -2.43
RNU6-239P-201ENST00000390990 TRAT1Q6PIZ9 186 aa-0.13□□□□□ -2.43
RNU6-239P-201ENST00000390990 NTM-AS1Q6ZSK4 140 aa-0.13□□□□□ -2.43
RNU6-239P-201ENST00000390990 SIAH3Q8IW03 269 aa-0.13□□□□□ -2.43
RNU6-239P-201ENST00000390990 KLHL7Q8IXQ5 586 aa-0.13□□□□□ -2.43
RNU6-239P-201ENST00000390990 LGI3Q8N145 548 aa-0.13□□□□□ -2.43
RNU6-239P-201ENST00000390990 LRRC52Q8N7C0 313 aa-0.13□□□□□ -2.43
RNU6-239P-201ENST00000390990 CNNM3Q8NE01 707 aa-0.13□□□□□ -2.43
RNU6-239P-201ENST00000390990 OR6C4Q8NGE1 309 aa-0.13□□□□□ -2.43
RNU6-239P-201ENST00000390990 MCOLN3Q8TDD5 553 aa-0.13□□□□□ -2.43
RNU6-239P-201ENST00000390990 RTN4IP1Q8WWV3 396 aaPredicted RBP-0.13□□□□□ -2.43
RNU6-239P-201ENST00000390990 ERO1AQ96HE7 468 aa-0.13□□□□□ -2.43
RNU6-239P-201ENST00000390990 FCRL1Q96LA6 429 aa-0.13□□□□□ -2.43
RNU6-239P-201ENST00000390990 DNTTIP1Q9H147 329 aa-0.13□□□□□ -2.43
RNU6-239P-201ENST00000390990 RPP21Q9H633 154 aaKnown RBP-0.13□□□□□ -2.43
RNU6-239P-201ENST00000390990 PFDN4Q9NQP4 134 aa-0.13□□□□□ -2.43
RNU6-239P-201ENST00000390990 NARFQ9UHQ1 456 aa-0.13□□□□□ -2.43
RNU6-239P-201ENST00000390990 GMPPBQ9Y5P6 360 aa-0.13□□□□□ -2.43
RNU6-239P-201ENST00000390990 TMEM14AQ9Y6G1 99 aa-0.13□□□□□ -2.43
RNU6-239P-201ENST00000390990 PTPRTO14522 1441 aa-0.13□□□□□ -2.43
RNU6-239P-201ENST00000390990 NACADO15069 1562 aa-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 NPC1L1Q9UHC9 1359 aa-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 FBLL1A6NHQ2 334 aaKnown RBP-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 TPST2O60704 377 aa-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 ADCY5O95622 1261 aa-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 IGLV2-8P01709 118 aa-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 APRTP07741 180 aa-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 SERPINB6P35237 376 aa-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 GNPDA1P46926 289 aa-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 KLK7P49862 253 aa-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 NOVA1P51513 510 aaKnown RBP-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 HMGCS1Q01581 520 aa-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 REG3AQ06141 175 aa-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 SIM2Q14190 667 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 STXBP2Q15833 593 aa-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 SLC5A12Q1EHB4 618 aa-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 RFX4Q33E94 735 aa-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 ANKRD20A4Q4UJ75 823 aa-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 SLC39A12Q504Y0 691 aa-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 PARP10Q53GL7 1025 aa-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 BOLA3Q53S33 107 aa-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 LRRC10Q5BKY1 277 aa-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 ANKRD20A2Q5SQ80 823 aa-0.14□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms