RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 KRTAP21-3Q3LHN1 58 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 TMEM52BQ4KMG9 183 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 ANKRD20A4Q4UJ75 823 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 BOLA3Q53S33 107 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 CYBRD1Q53TN4 286 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 TMEM255AQ5JRV8 349 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 CCDC158Q5M9N0 1113 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 ANKRD20A2Q5SQ80 823 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 MARCH8Q5T0T0 291 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 ANKRD20A1Q5TYW2 823 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 ANKRD20A3Q5VUR7 823 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 IL23RQ5VWK5 629 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 NKAIN2Q5VXU1 208 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 SAXO2Q658L1 398 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 KCTD11Q693B1 232 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 TMEM225Q6GV28 225 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 SLC30A6Q6NXT4 461 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 RPUSD3Q6P087 351 aaKnown RBP0.08□□□□□ -2.4
SNORD28-201ENST00000384706 SCYL2Q6P3W7 929 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 SLC39A4Q6P5W5 647 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 TRAT1Q6PIZ9 186 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 CYS1Q717R9 158 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 BNIPLQ7Z465 357 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 P4HA3Q7Z4N8 544 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 TUSC5Q8IXB3 177 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 CCDC36Q8IYA8 594 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 LGI3Q8N145 548 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 LRRC52Q8N7C0 313 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 NKAPP1Q8N9T2 125 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 GATSQ8NAP1 163 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 NECAP1Q8NC96 275 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 NEK11Q8NG66 645 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 OR6C4Q8NGE1 309 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 MCOLN3Q8TDD5 553 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 RNF139Q8WU17 664 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 SLC5A11Q8WWX8 675 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 FAM162AQ96A26 154 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 TMEM159Q96B96 161 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 ERO1AQ96HE7 468 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 EPSTI1Q96J88 318 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 GBP5Q96PP8 586 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 GAL3ST1Q99999 423 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 SULT4A1Q9BR01 284 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 SHANK2-AS3Q9BTD1 123 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 ANGPTL4Q9BY76 406 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 TXLNGYQ9BZA5 131 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 ROGDIQ9GZN7 287 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 DDX47Q9H0S4 455 aaKnown RBP0.08□□□□□ -2.4
SNORD28-201ENST00000384706 ABCG4Q9H172 646 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 OR10A4Q9H209 315 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 PPDPFQ9H3Y8 114 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 FAM124BQ9H5Z6 455 aaPredicted RBP0.08□□□□□ -2.4
SNORD28-201ENST00000384706 TMEM206Q9H813 350 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 VCPKMTQ9H867 229 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 COG4Q9H9E3 785 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 MAGEF1Q9HAY2 307 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 ZFP14Q9HCL3 533 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 TUFT1Q9NNX1 390 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 SLC40A1Q9NP59 571 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 ZCCHC3Q9NUD5 404 aaKnown RBP0.08□□□□□ -2.4
SNORD28-201ENST00000384706 WRAP73Q9P2S5 460 aaPredicted RBP0.08□□□□□ -2.4
SNORD28-201ENST00000384706 COPS7AQ9UBW8 275 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 XPO7Q9UIA9 1087 aaKnown RBP0.08□□□□□ -2.4
SNORD28-201ENST00000384706 RAB23Q9ULC3 237 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 TRAF3IP3Q9Y228 551 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 GMPPBQ9Y5P6 360 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 S4R3C0 116 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 DOCK8Q8NF50 2099 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 RAD54L2Q9Y4B4 1467 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 SCN1AP35498 2009 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 BAHCC1Q9P281 2608 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 COL22A1Q8NFW1 1626 aaPredicted RBP0.07□□□□□ -2.4
SNORD28-201ENST00000384706 IGHV3OR16-13A0A075B7E8 117 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 A0A1B0GWB2 263 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 TTC26A0AVF1 554 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 A6NIZ1 184 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 E9PBE3 544 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 H0YL77 283 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 KIF2AO00139 706 aaPredicted RBP0.07□□□□□ -2.4
SNORD28-201ENST00000384706 CACNB4O00305 520 aaPredicted RBP0.07□□□□□ -2.4
SNORD28-201ENST00000384706 ARPC1BO15143 372 aaKnown RBP0.07□□□□□ -2.4
SNORD28-201ENST00000384706 SOCS1O15524 211 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 ADAM12O43184 909 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 BUB1O43683 1085 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 JAK2O60674 1132 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 ECI2O75521 394 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 CCNKO75909 580 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 SYNGR4O95473 234 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 HSPA4LO95757 839 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 IGLV2-23P01705 113 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 IFI30P13284 250 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 HPGDP15428 266 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 GCFC2P16383 781 aaKnown RBP0.07□□□□□ -2.4
SNORD28-201ENST00000384706 CASTP20810 708 aaKnown RBP0.07□□□□□ -2.4
SNORD28-201ENST00000384706 CNR1P21554 472 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 ATP5A1P25705 553 aaKnown RBP0.07□□□□□ -2.4
SNORD28-201ENST00000384706 FMO3P31513 532 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 BTCP35070 178 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 VDAC2P45880 294 aaPredicted RBP0.07□□□□□ -2.4
SNORD28-201ENST00000384706 ASMTP46597 345 aa0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms