RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 MAOAP21397 527 aa13.19□□□□□ -0.3
CLCN4-201ENST00000380829 SOX3P41225 446 aa13.19□□□□□ -0.3
CLCN4-201ENST00000380829 MAP3K8P41279 467 aa13.19□□□□□ -0.3
CLCN4-201ENST00000380829 SNRPGP62308 76 aaKnown RBP13.19□□□□□ -0.3
CLCN4-201ENST00000380829 MFSD13AQ14CX5 517 aa13.19□□□□□ -0.3
CLCN4-201ENST00000380829 ZBTB37Q5TC79 503 aa13.19□□□□□ -0.3
CLCN4-201ENST00000380829 TIGD4Q8IY51 512 aa13.19□□□□□ -0.3
CLCN4-201ENST00000380829 RIT1Q92963 219 aa13.19□□□□□ -0.3
CLCN4-201ENST00000380829 RBM18Q96H35 190 aaKnown RBP13.19□□□□□ -0.3
CLCN4-201ENST00000380829 KCNN2Q9H2S1 579 aa13.19□□□□□ -0.3
CLCN4-201ENST00000380829 NIPAL2Q9H841 368 aa13.19□□□□□ -0.3
CLCN4-201ENST00000380829 PDE7BQ9NP56 450 aa13.19□□□□□ -0.3
CLCN4-201ENST00000380829 SLC7A7Q9UM01 511 aa13.19□□□□□ -0.3
CLCN4-201ENST00000380829 PLCL2Q9UPR0 1127 aa13.19□□□□□ -0.3
CLCN4-201ENST00000380829 BCAT2O15382 392 aaPredicted RBP13.19□□□□□ -0.3
CLCN4-201ENST00000380829 HRO43593 1189 aa13.19□□□□□ -0.3
CLCN4-201ENST00000380829 TLX2O43763 284 aaPredicted RBP13.19□□□□□ -0.3
CLCN4-201ENST00000380829 NSA2O95478 260 aaKnown RBP13.19□□□□□ -0.3
CLCN4-201ENST00000380829 S1PR1P21453 382 aa13.19□□□□□ -0.3
CLCN4-201ENST00000380829 RPS4Y1P22090 263 aaKnown RBP13.19□□□□□ -0.3
CLCN4-201ENST00000380829 GIPRP48546 466 aa13.19□□□□□ -0.3
CLCN4-201ENST00000380829 FNTBP49356 437 aa13.19□□□□□ -0.3
CLCN4-201ENST00000380829 ZNF136P52737 540 aa13.19□□□□□ -0.3
CLCN4-201ENST00000380829 OR1D5P58170 312 aa13.19□□□□□ -0.3
CLCN4-201ENST00000380829 POU4F3Q15319 338 aa13.19□□□□□ -0.3
CLCN4-201ENST00000380829 FLYWCH1Q4VC44 716 aa13.19□□□□□ -0.3
CLCN4-201ENST00000380829 OGFOD3Q6PK18 319 aa13.19□□□□□ -0.3
CLCN4-201ENST00000380829 OR4N2Q8NGD1 307 aa13.19□□□□□ -0.3
CLCN4-201ENST00000380829 LHFPL5Q8TAF8 219 aa13.19□□□□□ -0.3
CLCN4-201ENST00000380829 MGLLQ99685 303 aa13.19□□□□□ -0.3
CLCN4-201ENST00000380829 PRTFDC1Q9NRG1 225 aa13.19□□□□□ -0.3
CLCN4-201ENST00000380829 ZNF224Q9NZL3 707 aa13.19□□□□□ -0.3
CLCN4-201ENST00000380829 DTX4Q9Y2E6 619 aa13.19□□□□□ -0.3
CLCN4-201ENST00000380829 K7ESF4 209 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 DBIP07108 87 aaKnown RBP13.18□□□□□ -0.3
CLCN4-201ENST00000380829 THBS1P07996 1170 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 NID1P14543 1247 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 GPR4P46093 362 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 OMPP47874 163 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 CXCL12P48061 93 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 SKP1P63208 163 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 PSG6Q00889 435 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 AMZ1Q400G9 498 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 EIPR1Q53HC9 387 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 CLEC12AQ5QGZ9 265 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 ZCCHC12Q6PEW1 402 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 NRMQ8IXM6 262 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 C9orf62Q8N4C0 152 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 OR8D4Q8NGM9 314 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 OR8J1Q8NGP2 316 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 GNPDA2Q8TDQ7 276 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 AHCYL2Q96HN2 611 aaKnown RBP13.18□□□□□ -0.3
CLCN4-201ENST00000380829 SLC25A19Q9HC21 320 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 ABCB9Q9NP78 766 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 MRPS33Q9Y291 106 aaKnown RBP13.18□□□□□ -0.3
CLCN4-201ENST00000380829 WDR87Q6ZQQ6 2873 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 A0A1B0GVT2 93 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 BRINP1O60477 761 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 SLC22A5O76082 557 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 GSTM3P21266 225 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 HLA-DMAP28067 261 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 HTR2AP28223 471 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 IFNGR2P38484 337 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 EMDP50402 254 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 PGDP52209 483 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 RAB25P57735 213 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 ZP2Q05996 745 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 FAM53BQ14153 422 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.18□□□□□ -0.3
CLCN4-201ENST00000380829 XKRXQ6PP77 449 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 ZNF614Q8N883 585 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 PIGXQ8TBF5 258 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 ACOT11Q8WXI4 607 aaPredicted RBP13.18□□□□□ -0.3
CLCN4-201ENST00000380829 NR4A3Q92570 626 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 MARVELD3Q96A59 401 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 CLDN23Q96B33 292 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 ZNF285Q96NJ3 590 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 SAP130Q9H0E3 1048 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 PPIL3Q9H2H8 161 aaKnown RBP13.18□□□□□ -0.3
CLCN4-201ENST00000380829 LIN7BQ9HAP6 207 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 FOLH1BQ9HBA9 442 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 GALNT9Q9HCQ5 603 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 CNOT2Q9NZN8 540 aaKnown RBP13.18□□□□□ -0.3
CLCN4-201ENST00000380829 CMAHPQ9Y471 501 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 CLDN16Q9Y5I7 305 aa13.18□□□□□ -0.3
CLCN4-201ENST00000380829 EML5Q05BV3 1969 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 A0A1W2PPC1 479 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 CTNSO60931 367 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 OR5F1O95221 314 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 AFF3P51826 1226 aaKnown RBP13.17□□□□□ -0.3
CLCN4-201ENST00000380829 CDK5Q00535 292 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 TSPAN31Q12999 210 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 ZMYND11Q15326 602 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 NNATQ16517 81 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 GLYR1Q49A26 553 aaPredicted RBP13.17□□□□□ -0.3
CLCN4-201ENST00000380829 PDZK1Q5T2W1 519 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 TIGD3Q6B0B8 471 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 PLAG1Q6DJT9 500 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 TSSK4Q6SA08 328 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 PLET1Q6UQ28 207 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms