RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 EIF4E2O60573 245 aaKnown RBP20.43■□□□□ 0.86
U2AF1-202ENST00000380276 CYTIPO60759 359 aa20.43■□□□□ 0.86
U2AF1-202ENST00000380276 H6PDO95479 791 aa20.43■□□□□ 0.86
U2AF1-202ENST00000380276 CD8AP01732 235 aa20.43■□□□□ 0.86
U2AF1-202ENST00000380276 IGHV3-9P01782 118 aa20.43■□□□□ 0.86
U2AF1-202ENST00000380276 IGHV1-2P23083 117 aa20.43■□□□□ 0.86
U2AF1-202ENST00000380276 EDNRAP25101 427 aa20.43■□□□□ 0.86
U2AF1-202ENST00000380276 PTGR1Q14914 329 aa20.43■□□□□ 0.86
U2AF1-202ENST00000380276 GPR68Q15743 365 aa20.43■□□□□ 0.86
U2AF1-202ENST00000380276 NRF1Q16656 503 aa20.43■□□□□ 0.86
U2AF1-202ENST00000380276 CHRFAM7AQ494W8 412 aa20.43■□□□□ 0.86
U2AF1-202ENST00000380276 TIGD2Q4W5G0 525 aa20.43■□□□□ 0.86
U2AF1-202ENST00000380276 AGAP6Q5VW22 663 aa20.43■□□□□ 0.86
U2AF1-202ENST00000380276 ZNF524Q96C55 264 aa20.43■□□□□ 0.86
U2AF1-202ENST00000380276 ADAD1Q96M93 576 aaKnown RBP20.43■□□□□ 0.86
U2AF1-202ENST00000380276 THUMPD3Q9BV44 507 aaKnown RBP20.43■□□□□ 0.86
U2AF1-202ENST00000380276 SERINC1Q9NRX5 453 aa20.43■□□□□ 0.86
U2AF1-202ENST00000380276 GPATCH2Q9NW75 528 aa20.43■□□□□ 0.86
U2AF1-202ENST00000380276 ING1Q9UK53 422 aaPredicted RBP20.43■□□□□ 0.86
U2AF1-202ENST00000380276 B3GALT5Q9Y2C3 310 aa20.43■□□□□ 0.86
U2AF1-202ENST00000380276 FREM1Q5H8C1 2179 aa20.43■□□□□ 0.86
U2AF1-202ENST00000380276 ANK3Q12955 4377 aaKnown RBP20.42■□□□□ 0.86
U2AF1-202ENST00000380276 CIB4A0PJX0 185 aa20.42■□□□□ 0.86
U2AF1-202ENST00000380276 RAD51DO75771 328 aa20.42■□□□□ 0.86
U2AF1-202ENST00000380276 ATP6AP1LQ52LC2 224 aa20.42■□□□□ 0.86
U2AF1-202ENST00000380276 TIMM23BQ5SRD1 257 aa20.42■□□□□ 0.86
U2AF1-202ENST00000380276 DNAJC14Q6Y2X3 702 aaPredicted RBP20.42■□□□□ 0.86
U2AF1-202ENST00000380276 GALNT5Q7Z7M9 940 aa20.42■□□□□ 0.86
U2AF1-202ENST00000380276 PHC2Q8IXK0 858 aa20.42■□□□□ 0.86
U2AF1-202ENST00000380276 FNDC5Q8NAU1 212 aa20.42■□□□□ 0.86
U2AF1-202ENST00000380276 OR52N5Q8NH56 324 aa20.42■□□□□ 0.86
U2AF1-202ENST00000380276 MOAP1Q96BY2 351 aa20.42■□□□□ 0.86
U2AF1-202ENST00000380276 PRPF18Q99633 342 aaKnown RBP20.42■□□□□ 0.86
U2AF1-202ENST00000380276 CACNG6Q9BXT2 260 aa20.42■□□□□ 0.86
U2AF1-202ENST00000380276 EML4Q9HC35 981 aaKnown RBP20.42■□□□□ 0.86
U2AF1-202ENST00000380276 NPAP1Q9NZP6 1156 aa20.42■□□□□ 0.86
U2AF1-202ENST00000380276 IGHV4-30-2A0A087WSY4 118 aa20.41■□□□□ 0.86
U2AF1-202ENST00000380276 SERINC4A6NH21 518 aa20.41■□□□□ 0.86
U2AF1-202ENST00000380276 CCT8L1PA6NM43 557 aa20.41■□□□□ 0.86
U2AF1-202ENST00000380276 SLU7O95391 586 aaKnown RBP20.41■□□□□ 0.86
U2AF1-202ENST00000380276 TFPIP10646 304 aa20.41■□□□□ 0.86
U2AF1-202ENST00000380276 ZNF83P51522 516 aa20.41■□□□□ 0.86
U2AF1-202ENST00000380276 RPS26P62854 115 aaKnown RBP20.41■□□□□ 0.86
U2AF1-202ENST00000380276 CHRNEQ04844 493 aa20.41■□□□□ 0.86
U2AF1-202ENST00000380276 MERTKQ12866 999 aa20.41■□□□□ 0.86
U2AF1-202ENST00000380276 SLC25A53Q5H9E4 307 aa20.41■□□□□ 0.86
U2AF1-202ENST00000380276 SLC22A25Q6T423 547 aa20.41■□□□□ 0.86
U2AF1-202ENST00000380276 CLEC2AQ6UVW9 174 aa20.41■□□□□ 0.86
U2AF1-202ENST00000380276 DTX2Q86UW9 622 aa20.41■□□□□ 0.86
U2AF1-202ENST00000380276 SFXN5Q8TD22 340 aa20.41■□□□□ 0.86
U2AF1-202ENST00000380276 DNAJA3Q96EY1 480 aa20.41■□□□□ 0.86
U2AF1-202ENST00000380276 SDF2Q99470 211 aa20.41■□□□□ 0.86
U2AF1-202ENST00000380276 FAM234BA2RU67 622 aa20.4■□□□□ 0.86
U2AF1-202ENST00000380276 ZNF724A8MTY0 619 aa20.4■□□□□ 0.86
U2AF1-202ENST00000380276 NPIPB9F8W1W9 429 aa20.4■□□□□ 0.86
U2AF1-202ENST00000380276 SULT2B1O00204 365 aa20.4■□□□□ 0.86
U2AF1-202ENST00000380276 GPRIN2O60269 458 aa20.4■□□□□ 0.86
U2AF1-202ENST00000380276 SKAP2O75563 359 aaPredicted RBP20.4■□□□□ 0.86
U2AF1-202ENST00000380276 UBTFL6P0CB48 400 aaPredicted RBP20.4■□□□□ 0.86
U2AF1-202ENST00000380276 ALDH3A1P30838 453 aa20.4■□□□□ 0.86
U2AF1-202ENST00000380276 DIO1P49895 249 aa20.4■□□□□ 0.86
U2AF1-202ENST00000380276 CSNK2A1P68400 391 aaPredicted RBP20.4■□□□□ 0.86
U2AF1-202ENST00000380276 ARL13AQ5H913 290 aaPredicted RBP20.4■□□□□ 0.86
U2AF1-202ENST00000380276 IL23RQ5VWK5 629 aa20.4■□□□□ 0.86
U2AF1-202ENST00000380276 TMEM108Q6UXF1 575 aa20.4■□□□□ 0.86
U2AF1-202ENST00000380276 HOMEZQ8IX15 550 aa20.4■□□□□ 0.86
U2AF1-202ENST00000380276 KRTCAP2Q8N6L1 136 aa20.4■□□□□ 0.86
U2AF1-202ENST00000380276 NATD1Q8N6N6 113 aa20.4■□□□□ 0.86
U2AF1-202ENST00000380276 TMEM158Q8WZ71 300 aa20.4■□□□□ 0.86
U2AF1-202ENST00000380276 HTRA1Q92743 480 aa20.4■□□□□ 0.86
U2AF1-202ENST00000380276 MECRQ9BV79 373 aa20.4■□□□□ 0.86
U2AF1-202ENST00000380276 EMC3Q9P0I2 261 aa20.4■□□□□ 0.86
U2AF1-202ENST00000380276 NOSIPQ9Y314 301 aaKnown RBP20.4■□□□□ 0.86
U2AF1-202ENST00000380276 SONP18583 2426 aaKnown RBP20.39■□□□□ 0.86
U2AF1-202ENST00000380276 A0A1W2PR80 420 aa20.39■□□□□ 0.85
U2AF1-202ENST00000380276 OR5H1A6NKK0 313 aa20.39■□□□□ 0.85
U2AF1-202ENST00000380276 NPHS1O60500 1241 aa20.39■□□□□ 0.85
U2AF1-202ENST00000380276 LYPLA1O75608 230 aaPredicted RBP20.39■□□□□ 0.85
U2AF1-202ENST00000380276 CSTAP01040 98 aa20.39■□□□□ 0.85
U2AF1-202ENST00000380276 FGF4P08620 206 aa20.39■□□□□ 0.85
U2AF1-202ENST00000380276 COX5AP20674 150 aa20.39■□□□□ 0.85
U2AF1-202ENST00000380276 MATN1P21941 496 aa20.39■□□□□ 0.85
U2AF1-202ENST00000380276 SESN3P58005 492 aa20.39■□□□□ 0.85
U2AF1-202ENST00000380276 IRX1P78414 480 aaPredicted RBP20.39■□□□□ 0.85
U2AF1-202ENST00000380276 PGS1Q32NB8 556 aa20.39■□□□□ 0.85
U2AF1-202ENST00000380276 BHLHB9Q6PI77 547 aa20.39■□□□□ 0.85
U2AF1-202ENST00000380276 DNM1P46Q6ZS02 220 aa20.39■□□□□ 0.85
U2AF1-202ENST00000380276 ZCCHC23Q6ZST2 131 aa20.39■□□□□ 0.85
U2AF1-202ENST00000380276 SSX8Q7RTT4 187 aa20.39■□□□□ 0.85
U2AF1-202ENST00000380276 OLIG3Q7RTU3 272 aa20.39■□□□□ 0.85
U2AF1-202ENST00000380276 P2RY8Q86VZ1 359 aa20.39■□□□□ 0.85
U2AF1-202ENST00000380276 FBXL14Q8N1E6 418 aa20.39■□□□□ 0.85
U2AF1-202ENST00000380276 ZNF563Q8TA94 476 aa20.39■□□□□ 0.85
U2AF1-202ENST00000380276 TMEM234Q8WY98 164 aa20.39■□□□□ 0.85
U2AF1-202ENST00000380276 ZNF75CPQ92670 426 aaPredicted RBP20.39■□□□□ 0.85
U2AF1-202ENST00000380276 ZHX1-C8orf76Q96EF9 292 aa20.39■□□□□ 0.85
U2AF1-202ENST00000380276 SLC35G5Q96KT7 338 aa20.39■□□□□ 0.85
U2AF1-202ENST00000380276 DUSP26Q9BV47 211 aa20.39■□□□□ 0.85
U2AF1-202ENST00000380276 LAT2Q9GZY6 243 aa20.39■□□□□ 0.85
U2AF1-202ENST00000380276 PPCSQ9HAB8 311 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms