RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 ADH7P40394 386 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 SF3A2Q15428 464 aaKnown RBP14.04□□□□□ -0.16
NPHP4-201ENST00000378156 RNASE10Q5GAN6 216 aaKnown RBP14.04□□□□□ -0.16
NPHP4-201ENST00000378156 ADAMTS16Q8TE57 1224 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 DDIT4LQ96D03 193 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 LYSMD1Q96S90 227 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 MS4A8Q9BY19 250 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 OCEL1Q9H607 264 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 BIN3Q9NQY0 253 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 PSORS1C1Q9UIG5 152 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 NUBP2Q9Y5Y2 271 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 PRRT4C9JH25 899 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 UBL4AP11441 157 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 NPPBP16860 134 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 ISL1P61371 349 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 BCL2L15Q5TBC7 163 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 MTFR2Q6P444 385 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 ELP5Q8TE02 316 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 ELSPBP1Q96BH3 223 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 KLK8O60259 260 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 TNFSF8P32971 234 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 GIPRP48546 466 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 TLE3Q04726 772 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 MLF2Q15773 248 aaPredicted RBP14.04□□□□□ -0.16
NPHP4-201ENST00000378156 PIP5KL1Q5T9C9 394 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 ARHGAP9Q9BRR9 750 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 CXorf36Q9H7Y0 433 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 ARFGEF1Q9Y6D6 1849 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 TCRBV5S2A0A599 114 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 CIB4A0PJX0 185 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 PHYHO14832 338 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 TSPAN12O95859 305 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 CNIH2Q6PI25 160 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 VRK2Q86Y07 508 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 OR5T2Q8NGG2 359 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 MRI1Q9BV20 369 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 BTBD2Q9BX70 525 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 SLC6A17Q9H1V8 727 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 NT5DC2Q9H857 520 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 TM7SF3Q9NS93 570 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 UBR3Q6ZT12 1888 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 FAM183AA6NL82 134 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 FAM155AB1AL88 458 aaPredicted RBP14.03□□□□□ -0.16
NPHP4-201ENST00000378156 EGFP01133 1207 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 MRPL49Q13405 166 aaKnown RBP14.03□□□□□ -0.16
NPHP4-201ENST00000378156 CDNFQ49AH0 187 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 SLC18B1Q6NT16 456 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 GPR137CQ8N3F9 429 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 SYT14Q8NB59 555 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 BPIFA2Q96DR5 249 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 IL21Q9HBE4 155 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 ASIC5Q9NY37 505 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 VNN3Q9NY84 501 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 MRPL15Q9P015 296 aaKnown RBP14.03□□□□□ -0.16
NPHP4-201ENST00000378156 RPL35P42766 123 aaKnown RBP14.03□□□□□ -0.16
NPHP4-201ENST00000378156 OR1D4P47884 311 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 ERV3-1Q14264 604 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 CTU2Q2VPK5 515 aaKnown RBP14.03□□□□□ -0.16
NPHP4-201ENST00000378156 UBE2UQ5VVX9 321 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 OR14L1PQ8NHC6 308 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 CHPT1Q8WUD6 406 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 SLC6A7Q99884 636 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 TCEAL7Q9BRU2 100 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 PPA2Q9H2U2 334 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 MEPEQ9NQ76 525 aaPredicted RBP14.03□□□□□ -0.16
NPHP4-201ENST00000378156 CUTCQ9NTM9 273 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 TEX10Q9NXF1 929 aaPredicted RBP14.03□□□□□ -0.16
NPHP4-201ENST00000378156 PTRH2Q9Y3E5 179 aaKnown RBP14.03□□□□□ -0.16
NPHP4-201ENST00000378156 IER3IP1Q9Y5U9 82 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 F8W036 122 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 H3BML4 177 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 JUNBP17275 347 aaPredicted RBP14.03□□□□□ -0.16
NPHP4-201ENST00000378156 UQCRC1P31930 480 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 FOLR3P41439 243 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 SELENOVP59797 346 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 BLOC1S1P78537 153 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 GAB1Q13480 694 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 ADPRMQ3LIE5 342 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 OR2G6Q5TZ20 316 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 KDM4DQ6B0I6 523 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 FIP1L1Q6UN15 594 aaKnown RBP14.03□□□□□ -0.16
NPHP4-201ENST00000378156 ADIPOR2Q86V24 386 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 PPP1R3BQ86XI6 285 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 ZNF100Q8IYN0 542 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 C7orf50Q9BRJ6 194 aaKnown RBP14.03□□□□□ -0.16
NPHP4-201ENST00000378156 ALG8Q9BVK2 526 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 QRSL1Q9H0R6 528 aaKnown RBP14.03□□□□□ -0.16
NPHP4-201ENST00000378156 PTTG3PQ9NZH4 202 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 VDAC3Q9Y277 283 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 SIT1Q9Y3P8 196 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 SULT1C2O00338 296 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 GABARAPO95166 117 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 IFNA17P01571 189 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 KCNJ10P78508 379 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 GPR18Q14330 331 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 PRAMEF8Q5VWM4 474 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 PRAMEF7Q5VXH5 474 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 GALNT11Q8NCW6 608 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 PKMYT1Q99640 499 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 CENPOQ9BU64 300 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms