RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 NR3C1P04150 777 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 RBMS1P29558 406 aaKnown RBP8.34□□□□□ -1.07
UBR4-201ENST00000375218 PMELP40967 661 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 NHLH2Q02577 135 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 BST2Q10589 180 aaKnown RBP8.34□□□□□ -1.07
UBR4-201ENST00000375218 AGKQ53H12 422 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 ACSBG2Q5FVE4 666 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 ZNF841Q6ZN19 808 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 PIGXQ8TBF5 258 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 ABHD3Q8WU67 409 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 APH1AQ96BI3 265 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 R3HDM4Q96D70 268 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 ZNF75AQ96N20 296 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 JMJD8Q96S16 334 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 LIN7CQ9NUP9 197 aaKnown RBP8.34□□□□□ -1.07
UBR4-201ENST00000375218 TMEM30AQ9NV96 361 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 ABT1Q9ULW3 272 aaKnown RBP8.34□□□□□ -1.07
UBR4-201ENST00000375218 CMAHPQ9Y471 501 aa8.34□□□□□ -1.07
UBR4-201ENST00000375218 FAM240BA0A1B0GVZ2 78 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 I3L521 148 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 OIP5O43482 229 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 LRIG2O94898 1065 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 MED26O95402 600 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 IFNA4P05014 189 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 ACADLP28330 430 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 UBE2MP61081 183 aaKnown RBP8.33□□□□□ -1.08
UBR4-201ENST00000375218 ZNF91Q05481 1191 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 GABRA6Q16445 453 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 OTUD1Q5VV17 481 aaPredicted RBP8.33□□□□□ -1.08
UBR4-201ENST00000375218 WFDC3Q8IUB2 231 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 Q8N402 240 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 HRASLS5Q96KN8 279 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 SLC2A11Q9BYW1 496 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 TMEM38AQ9H6F2 299 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 RANGRFQ9HD47 186 aaPredicted RBP8.33□□□□□ -1.08
UBR4-201ENST00000375218 HMG20AQ9NP66 347 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 SLC22A11Q9NSA0 550 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 FAM207AQ9NSI2 230 aaPredicted RBP8.33□□□□□ -1.08
UBR4-201ENST00000375218 GNG8Q9UK08 70 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 DENND4CQ5VZ89 1909 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 ANAPC1Q9H1A4 1944 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 A6NIZ1 184 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 SLC22A1O15245 554 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 S100GP29377 79 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 CSNK1A1P48729 337 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 RBBP4Q09028 425 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 MOB3CQ70IA8 216 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 ATP6V1C2Q8NEY4 427 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 MARVELD3Q96A59 401 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 CCDC126Q96EE4 140 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 NHEJ1Q9H9Q4 299 aaPredicted RBP8.33□□□□□ -1.08
UBR4-201ENST00000375218 NFU1Q9UMS0 254 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 SLC22A13Q9Y226 551 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 SLC6A5Q9Y345 797 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 COQ4Q9Y3A0 265 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 TCAF1Q9Y4C2 921 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 KIAA0513O60268 411 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 SLC19A2O60779 497 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 NDUFA10O95299 355 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 NPSP0C0P6 89 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 FCGR2AP12318 317 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 RAB6AP20340 208 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 UQCRC1P31930 480 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 WDR4P57081 412 aaKnown RBP8.33□□□□□ -1.08
UBR4-201ENST00000375218 GNG11P61952 73 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 ZFP36L1Q07352 338 aaKnown RBP8.33□□□□□ -1.08
UBR4-201ENST00000375218 GXYLT1Q4G148 440 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 CTSL3PQ5NE16 218 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 MBLAC2Q68D91 279 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 GLDNQ6ZMI3 551 aaPredicted RBP8.33□□□□□ -1.08
UBR4-201ENST00000375218 ZNF280BQ86YH2 543 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 SNX29P2Q8IUI4 249 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 NANOGP1Q8N7R0 232 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 ZNF557Q8N988 423 aaPredicted RBP8.33□□□□□ -1.08
UBR4-201ENST00000375218 OR4K2Q8NGD2 314 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 SLC2A12Q8TD20 617 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 CLEC4CQ8WTT0 213 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 HOXB13Q92826 284 aaPredicted RBP8.33□□□□□ -1.08
UBR4-201ENST00000375218 UBE2FQ969M7 185 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 SERPINB11Q96P15 392 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 SEPT5Q99719 369 aaPredicted RBP8.33□□□□□ -1.08
UBR4-201ENST00000375218 CPNE1Q99829 537 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 MYOCQ99972 504 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 PDCD10Q9BUL8 212 aa8.33□□□□□ -1.08
UBR4-201ENST00000375218 YTHDF1Q9BYJ9 559 aaKnown RBP8.33□□□□□ -1.08
UBR4-201ENST00000375218 RBM7Q9Y580 266 aaKnown RBP8.33□□□□□ -1.08
UBR4-201ENST00000375218 SMIM31A0A1B0GVY4 71 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 ZNF749O43361 778 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 SSNA1O43805 119 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 RAD1O60671 282 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 LDOC1O95751 146 aaPredicted RBP8.32□□□□□ -1.08
UBR4-201ENST00000375218 ADAP00813 363 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 C9P02748 559 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 CD1AP06126 327 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 UCHL3P15374 230 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 AMD1P17707 334 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 ADORA2AP29274 412 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 MAGEA12P43365 314 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 RPS7P62081 194 aaKnown RBP8.32□□□□□ -1.08
UBR4-201ENST00000375218 IMPG1Q17R60 797 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms