RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 ACACAQ13085 2346 aa13.19□□□□□ -0.3
HMGA1-203ENST00000374116 A0A1W2PQ72 361 aa13.19□□□□□ -0.3
HMGA1-203ENST00000374116 A0A1W2PS29 197 aa13.19□□□□□ -0.3
HMGA1-203ENST00000374116 SLC35F4A4IF30 521 aa13.19□□□□□ -0.3
HMGA1-203ENST00000374116 SNTNA6NMZ2 147 aa13.19□□□□□ -0.3
HMGA1-203ENST00000374116 FAM227AF5H4B4 570 aa13.19□□□□□ -0.3
HMGA1-203ENST00000374116 STMND1H3BQB6 276 aa13.19□□□□□ -0.3
HMGA1-203ENST00000374116 AP3D1O14617 1153 aa13.19□□□□□ -0.3
HMGA1-203ENST00000374116 SEC14L5O43304 696 aa13.19□□□□□ -0.3
HMGA1-203ENST00000374116 CHRM4P08173 479 aa13.19□□□□□ -0.3
HMGA1-203ENST00000374116 PIPP12273 146 aaPredicted RBP13.19□□□□□ -0.3
HMGA1-203ENST00000374116 RORAP35398 523 aa13.19□□□□□ -0.3
HMGA1-203ENST00000374116 SOX6P35712 828 aa13.19□□□□□ -0.3
HMGA1-203ENST00000374116 FEN1P39748 380 aaKnown RBP13.19□□□□□ -0.3
HMGA1-203ENST00000374116 ALDH6A1Q02252 535 aaKnown RBP13.19□□□□□ -0.3
HMGA1-203ENST00000374116 PGBD2Q6P3X8 592 aa13.19□□□□□ -0.3
HMGA1-203ENST00000374116 TMEM107Q6UX40 140 aa13.19□□□□□ -0.3
HMGA1-203ENST00000374116 C6orf15Q6UXA7 325 aaPredicted RBP13.19□□□□□ -0.3
HMGA1-203ENST00000374116 CD300LDQ6UXZ3 194 aa13.19□□□□□ -0.3
HMGA1-203ENST00000374116 SHISA6Q6ZSJ9 500 aa13.19□□□□□ -0.3
HMGA1-203ENST00000374116 VASH2Q86V25 355 aa13.19□□□□□ -0.3
HMGA1-203ENST00000374116 ELP4Q96EB1 424 aa13.19□□□□□ -0.3
HMGA1-203ENST00000374116 DCBLD2Q96PD2 775 aa13.19□□□□□ -0.3
HMGA1-203ENST00000374116 POLR2J3Q9H1A7 115 aaKnown RBP13.19□□□□□ -0.3
HMGA1-203ENST00000374116 CCDC86Q9H6F5 360 aaKnown RBP13.19□□□□□ -0.3
HMGA1-203ENST00000374116 PRDM9Q9NQV7 894 aa13.19□□□□□ -0.3
HMGA1-203ENST00000374116 SLC22A11Q9NSA0 550 aa13.19□□□□□ -0.3
HMGA1-203ENST00000374116 CALML5Q9NZT1 146 aa13.19□□□□□ -0.3
HMGA1-203ENST00000374116 NTMQ9P121 344 aa13.19□□□□□ -0.3
HMGA1-203ENST00000374116 HCN3Q9P1Z3 774 aa13.19□□□□□ -0.3
HMGA1-203ENST00000374116 EIF3KQ9UBQ5 218 aaKnown RBP13.19□□□□□ -0.3
HMGA1-203ENST00000374116 LIPT1Q9Y234 373 aa13.19□□□□□ -0.3
HMGA1-203ENST00000374116 LOC101059948A0A1B0GTJ6 334 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 A0A1B0GX78 115 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 OR2W5A6NFC9 320 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 M0R3H8 397 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 ARHGEF9O43307 516 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 RAD1O60671 282 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 RDH16O75452 317 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 C8orf89P0DMQ9 161 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 ADORA3P0DMS8 318 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 NR2F6P10588 404 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 XKP51811 444 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 RPS18P62269 152 aaKnown RBP13.18□□□□□ -0.3
HMGA1-203ENST00000374116 RIPPLY1Q0D2K3 151 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 FUT5Q11128 374 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 FAPQ12884 760 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 COX10Q12887 443 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 ASAH1Q13510 395 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 NDUFA9Q16795 377 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 FAM214AQ32MH5 1076 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 ZNF385CQ66K41 422 aaPredicted RBP13.18□□□□□ -0.3
HMGA1-203ENST00000374116 C12orf73Q69YU5 71 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 C19orf48Q6RUI8 117 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 IGF2-ASQ6U949 168 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 UNQ6494/PRO21346Q6UXR6 183 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 ZNF367Q7RTV3 350 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 PRSS58Q8IYP2 241 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 SAMD14Q8IZD0 417 aaPredicted RBP13.18□□□□□ -0.3
HMGA1-203ENST00000374116 RDH10Q8IZV5 341 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 NUP43Q8NFH3 380 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 NLGN4YQ8NFZ3 816 aaPredicted RBP13.18□□□□□ -0.3
HMGA1-203ENST00000374116 SLC7A13Q8TCU3 470 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 NR4A3Q92570 626 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 FGF11Q92914 225 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 NKD1Q969G9 470 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 COL26A1Q96A83 441 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 PRRC1Q96M27 445 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 ZNF578Q96N58 590 aaPredicted RBP13.18□□□□□ -0.3
HMGA1-203ENST00000374116 WDFY2Q96P53 400 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 OR7D2Q96RA2 312 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 SERINC2Q96SA4 455 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 WFDC6Q9BQY6 131 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 YIPF4Q9BSR8 244 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 RBCK1Q9BYM8 510 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 MRPS18BQ9Y676 258 aaKnown RBP13.18□□□□□ -0.3
HMGA1-203ENST00000374116 M0R129 80 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 SYT5O00445 386 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 NME6O75414 186 aaPredicted RBP13.18□□□□□ -0.3
HMGA1-203ENST00000374116 KLK3P07288 261 aaPredicted RBP13.18□□□□□ -0.3
HMGA1-203ENST00000374116 TCN2P20062 427 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 F8A1P23610 371 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 BUD31P41223 144 aaPredicted RBP13.18□□□□□ -0.3
HMGA1-203ENST00000374116 MAN2A2P49641 1150 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 GZMKP49863 264 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 TNFRSF17Q02223 184 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 PIN1Q13526 163 aaPredicted RBP13.18□□□□□ -0.3
HMGA1-203ENST00000374116 RUNX2Q13950 521 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 ERV3-1Q14264 604 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 TMEM201Q5SNT2 666 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 MANEAQ5SRI9 462 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 PLAG1Q6DJT9 500 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 PODNL1Q6PEZ8 512 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 COMTD1Q86VU5 262 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 IL22RA1Q8N6P7 574 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 SNAPC3Q92966 411 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 C16orf58Q96GQ5 468 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 SLC25A19Q9HC21 320 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 CTSFQ9UBX1 484 aa13.18□□□□□ -0.3
HMGA1-203ENST00000374116 PHF11Q9UIL8 331 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms