RNA–Protein interactions for RNA: ENST00000373602.9

CCDC28B-201, Transcript of coiled-coil domain containing 28B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-201ENST00000373602 STK32CQ86UX6 486 aa19.35■□□□□ 0.69
CCDC28B-201ENST00000373602 TRIML2Q8N7C3 387 aa19.35■□□□□ 0.69
CCDC28B-201ENST00000373602 TMEM234Q8WY98 164 aa19.35■□□□□ 0.69
CCDC28B-201ENST00000373602 ARL8AQ96BM9 186 aa19.35■□□□□ 0.69
CCDC28B-201ENST00000373602 MAELQ96JY0 434 aaKnown RBP19.35■□□□□ 0.69
CCDC28B-201ENST00000373602 OR52E6Q96RD3 313 aa19.35■□□□□ 0.69
CCDC28B-201ENST00000373602 PANX1Q96RD7 426 aa19.35■□□□□ 0.69
CCDC28B-201ENST00000373602 ZBTB18Q99592 522 aa19.35■□□□□ 0.69
CCDC28B-201ENST00000373602 KLHL13Q9P2N7 655 aa19.35■□□□□ 0.69
CCDC28B-201ENST00000373602 SLC35A3Q9Y2D2 325 aa19.35■□□□□ 0.69
CCDC28B-201ENST00000373602 HMGN4O00479 90 aa19.34■□□□□ 0.69
CCDC28B-201ENST00000373602 PRKD3O94806 890 aa19.34■□□□□ 0.69
CCDC28B-201ENST00000373602 THBDP07204 575 aa19.34■□□□□ 0.69
CCDC28B-201ENST00000373602 PGCP20142 388 aa19.34■□□□□ 0.69
CCDC28B-201ENST00000373602 KLK2P20151 261 aa19.34■□□□□ 0.69
CCDC28B-201ENST00000373602 LOXP28300 417 aaPredicted RBP19.34■□□□□ 0.69
CCDC28B-201ENST00000373602 SLC7A1P30825 629 aa19.34■□□□□ 0.69
CCDC28B-201ENST00000373602 RAC3P60763 192 aa19.34■□□□□ 0.69
CCDC28B-201ENST00000373602 PPP2R2AP63151 447 aa19.34■□□□□ 0.69
CCDC28B-201ENST00000373602 TXNL4AP83876 142 aaKnown RBP19.34■□□□□ 0.69
CCDC28B-201ENST00000373602 TMEM201Q5SNT2 666 aa19.34■□□□□ 0.69
CCDC28B-201ENST00000373602 C3orf33Q6P1S2 294 aa19.34■□□□□ 0.69
CCDC28B-201ENST00000373602 RNF130Q86XS8 419 aa19.34■□□□□ 0.69
CCDC28B-201ENST00000373602 TUSC5Q8IXB3 177 aa19.34■□□□□ 0.69
CCDC28B-201ENST00000373602 GLB1L3Q8NCI6 653 aaPredicted RBP19.34■□□□□ 0.69
CCDC28B-201ENST00000373602 ZG16BQ96DA0 208 aa19.34■□□□□ 0.69
CCDC28B-201ENST00000373602 INPP5KQ9BT40 448 aa19.34■□□□□ 0.69
CCDC28B-201ENST00000373602 QRSL1Q9H0R6 528 aaKnown RBP19.34■□□□□ 0.69
CCDC28B-201ENST00000373602 C12orf49Q9H741 205 aa19.34■□□□□ 0.69
CCDC28B-201ENST00000373602 ACER3Q9NUN7 267 aa19.34■□□□□ 0.69
CCDC28B-201ENST00000373602 BEX4Q9NWD9 120 aaPredicted RBP19.34■□□□□ 0.69
CCDC28B-201ENST00000373602 A0A1W2PNR3 127 aa19.33■□□□□ 0.68
CCDC28B-201ENST00000373602 BCAS1O75363 584 aaPredicted RBP19.33■□□□□ 0.68
CCDC28B-201ENST00000373602 H6PDO95479 791 aa19.33■□□□□ 0.68
CCDC28B-201ENST00000373602 PSMB1P20618 241 aaKnown RBP19.33■□□□□ 0.68
CCDC28B-201ENST00000373602 ENPP1P22413 925 aa19.33■□□□□ 0.68
CCDC28B-201ENST00000373602 CDKN2CP42773 168 aa19.33■□□□□ 0.68
CCDC28B-201ENST00000373602 ADAM8P78325 824 aa19.33■□□□□ 0.68
CCDC28B-201ENST00000373602 CHRNEQ04844 493 aa19.33■□□□□ 0.68
CCDC28B-201ENST00000373602 PDCD4Q53EL6 469 aaKnown RBP19.33■□□□□ 0.68
CCDC28B-201ENST00000373602 GPAT3Q53EU6 434 aa19.33■□□□□ 0.68
CCDC28B-201ENST00000373602 NUFIP2Q7Z417 695 aaKnown RBP19.33■□□□□ 0.68
CCDC28B-201ENST00000373602 SLC43A2Q8N370 569 aa19.33■□□□□ 0.68
CCDC28B-201ENST00000373602 OR10A4Q9H209 315 aa19.33■□□□□ 0.68
CCDC28B-201ENST00000373602 LIPT1Q9Y234 373 aa19.33■□□□□ 0.68
CCDC28B-201ENST00000373602 GPR52Q9Y2T5 361 aa19.33■□□□□ 0.68
CCDC28B-201ENST00000373602 YES1P07947 543 aa19.32■□□□□ 0.68
CCDC28B-201ENST00000373602 IDO1P14902 403 aa19.32■□□□□ 0.68
CCDC28B-201ENST00000373602 KCNJ10P78508 379 aa19.32■□□□□ 0.68
CCDC28B-201ENST00000373602 HPCAP84074 193 aa19.32■□□□□ 0.68
CCDC28B-201ENST00000373602 MERTKQ12866 999 aa19.32■□□□□ 0.68
CCDC28B-201ENST00000373602 FOXD4Q12950 439 aaPredicted RBP19.32■□□□□ 0.68
CCDC28B-201ENST00000373602 SLC9B1Q4ZJI4 515 aa19.32■□□□□ 0.68
CCDC28B-201ENST00000373602 NXNQ6DKJ4 435 aa19.32■□□□□ 0.68
CCDC28B-201ENST00000373602 TFAP2EQ6VUC0 442 aa19.32■□□□□ 0.68
CCDC28B-201ENST00000373602 ZNF621Q6ZSS3 439 aa19.32■□□□□ 0.68
CCDC28B-201ENST00000373602 PLEKHM3Q6ZWE6 761 aa19.32■□□□□ 0.68
CCDC28B-201ENST00000373602 MAVSQ7Z434 540 aa19.32■□□□□ 0.68
CCDC28B-201ENST00000373602 ANKFN1Q8N957 763 aa19.32■□□□□ 0.68
CCDC28B-201ENST00000373602 TRNT1Q96Q11 434 aaKnown RBP19.32■□□□□ 0.68
CCDC28B-201ENST00000373602 HS3ST6Q96QI5 342 aa19.32■□□□□ 0.68
CCDC28B-201ENST00000373602 TACO1Q9BSH4 297 aaKnown RBP19.32■□□□□ 0.68
CCDC28B-201ENST00000373602 BCO1Q9HAY6 547 aa19.32■□□□□ 0.68
CCDC28B-201ENST00000373602 SERINC1Q9NRX5 453 aa19.32■□□□□ 0.68
CCDC28B-201ENST00000373602 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.32■□□□□ 0.68
CCDC28B-201ENST00000373602 KLF11O14901 512 aa19.31■□□□□ 0.68
CCDC28B-201ENST00000373602 KLF4O43474 513 aa19.31■□□□□ 0.68
CCDC28B-201ENST00000373602 IL6P05231 212 aa19.31■□□□□ 0.68
CCDC28B-201ENST00000373602 GSNP06396 782 aa19.31■□□□□ 0.68
CCDC28B-201ENST00000373602 ANXA11P50995 505 aaKnown RBP19.31■□□□□ 0.68
CCDC28B-201ENST00000373602 PLAURQ03405 335 aa19.31■□□□□ 0.68
CCDC28B-201ENST00000373602 SYPL1Q16563 259 aa19.31■□□□□ 0.68
CCDC28B-201ENST00000373602 HMGN2P46Q86SG4 172 aa19.31■□□□□ 0.68
CCDC28B-201ENST00000373602 CXorf67Q86X51 503 aaPredicted RBP19.31■□□□□ 0.68
CCDC28B-201ENST00000373602 GABRG1Q8N1C3 465 aa19.31■□□□□ 0.68
CCDC28B-201ENST00000373602 PIWIL2Q8TC59 973 aaKnown RBP19.31■□□□□ 0.68
CCDC28B-201ENST00000373602 SLC25A43Q8WUT9 341 aaPredicted RBP19.31■□□□□ 0.68
CCDC28B-201ENST00000373602 OR5B2Q96R09 309 aa19.31■□□□□ 0.68
CCDC28B-201ENST00000373602 ACTR6Q9GZN1 396 aa19.31■□□□□ 0.68
CCDC28B-201ENST00000373602 SLC38A1Q9H2H9 487 aa19.31■□□□□ 0.68
CCDC28B-201ENST00000373602 EXOSC3Q9NQT5 275 aaKnown RBP19.31■□□□□ 0.68
CCDC28B-201ENST00000373602 KLHL9Q9P2J3 617 aa19.31■□□□□ 0.68
CCDC28B-201ENST00000373602 ING1Q9UK53 422 aaPredicted RBP19.31■□□□□ 0.68
CCDC28B-201ENST00000373602 IGHV3-15A0A0B4J1V0 119 aa19.3■□□□□ 0.68
CCDC28B-201ENST00000373602 GCM2O75603 506 aaPredicted RBP19.3■□□□□ 0.68
CCDC28B-201ENST00000373602 SLC22A3O75751 556 aa19.3■□□□□ 0.68
CCDC28B-201ENST00000373602 CHRM4P08173 479 aa19.3■□□□□ 0.68
CCDC28B-201ENST00000373602 APOBEC1P41238 236 aaKnown RBP19.3■□□□□ 0.68
CCDC28B-201ENST00000373602 ACKR1Q16570 336 aa19.3■□□□□ 0.68
CCDC28B-201ENST00000373602 GSTA3Q16772 222 aa19.3■□□□□ 0.68
CCDC28B-201ENST00000373602 BEX5Q5H9J7 111 aa19.3■□□□□ 0.68
CCDC28B-201ENST00000373602 LRRC74BQ6ZQY2 392 aa19.3■□□□□ 0.68
CCDC28B-201ENST00000373602 TMPPEQ6ZT21 453 aa19.3■□□□□ 0.68
CCDC28B-201ENST00000373602 ZNF563Q8TA94 476 aa19.3■□□□□ 0.68
CCDC28B-201ENST00000373602 PIP5K1AQ99755 562 aa19.3■□□□□ 0.68
CCDC28B-201ENST00000373602 PSD2Q9BQI7 771 aa19.3■□□□□ 0.68
CCDC28B-201ENST00000373602 CCDC106Q9BWC9 280 aa19.3■□□□□ 0.68
CCDC28B-201ENST00000373602 ZIM2Q9NZV7 527 aa19.3■□□□□ 0.68
CCDC28B-201ENST00000373602 C2CD3Q4AC94 2353 aa19.29■□□□□ 0.68
CCDC28B-201ENST00000373602 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms