RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 ADAMTS4O75173 837 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 CNOT4O95628 575 aaKnown RBP13.32□□□□□ -0.28
LMX1B-202ENST00000373474 HNRNPKP61978 463 aaKnown RBP eCLIP13.32□□□□□ -0.28
LMX1B-202ENST00000373474 MALLQ13021 153 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 RNF175Q8N4F7 328 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 TM9SF4Q92544 642 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 ZBTB8AQ96BR9 441 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 OLAHQ9NV23 265 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 PRSS44E7EML9 344 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 SRPX2O60687 465 aaPredicted RBP13.32□□□□□ -0.28
LMX1B-202ENST00000373474 ZNF26P17031 533 aaPredicted RBP13.32□□□□□ -0.28
LMX1B-202ENST00000373474 RBMS1P29558 406 aaKnown RBP13.32□□□□□ -0.28
LMX1B-202ENST00000373474 GJA5P36382 358 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 TCTE1Q5JU00 501 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 ENTPD8Q5MY95 495 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 FRMPD2BQ6IN97 320 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 PARS2Q7L3T8 475 aaKnown RBP13.32□□□□□ -0.28
LMX1B-202ENST00000373474 ADAMTS14Q8WXS8 1223 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 SYNPO2LQ9H987 977 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 HSFX1Q9UBD0 423 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 B3GALT1Q9Y5Z6 326 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 TTLL8A6PVC2 850 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 RFXAPO00287 272 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 FRS3O43559 492 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 PKLRP30613 574 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 BMPR1AP36894 532 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 TPMTP51580 245 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 SLC7A9P82251 487 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 DPY19L4Q7Z388 723 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 MEX3DQ86XN8 651 aaKnown RBP13.32□□□□□ -0.28
LMX1B-202ENST00000373474 ZNF611Q8N823 705 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 OR5L2Q8NGL0 311 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 SYNPRQ8TBG9 265 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 ACOT11Q8WXI4 607 aaPredicted RBP13.32□□□□□ -0.28
LMX1B-202ENST00000373474 MR1Q95460 341 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 EGLN2Q96KS0 407 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 ZNF583Q96ND8 569 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 APOOQ9BUR5 198 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 DEFB126Q9BYW3 111 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 NOX3Q9HBY0 568 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 PRDM9Q9NQV7 894 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 OR6C2Q9NZP2 312 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 SCML1Q9UN30 329 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 NAALAD2Q9Y3Q0 740 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 IER3IP1Q9Y5U9 82 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 HTR3BO95264 441 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 ARAFP10398 606 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 HOXC13P31276 330 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 SLC6A8P48029 635 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 THBS3P49746 956 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 SMN1Q16637 294 aaKnown RBP13.32□□□□□ -0.28
LMX1B-202ENST00000373474 ACSM3Q53FZ2 586 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 LRRC28Q86X40 367 aaPredicted RBP13.32□□□□□ -0.28
LMX1B-202ENST00000373474 SDR9C7Q8NEX9 313 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 THAP3Q8WTV1 239 aaPredicted RBP13.32□□□□□ -0.28
LMX1B-202ENST00000373474 ZNF480Q8WV37 535 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 LMF1Q96S06 567 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 UHRF1Q96T88 793 aaPredicted RBP13.32□□□□□ -0.28
LMX1B-202ENST00000373474 CWH43Q9H720 699 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 GAPDHSO14556 408 aaPredicted RBP13.31□□□□□ -0.28
LMX1B-202ENST00000373474 TOR1AO14656 332 aa13.31□□□□□ -0.28
LMX1B-202ENST00000373474 MED6O75586 246 aa13.31□□□□□ -0.28
LMX1B-202ENST00000373474 CAMK2DQ13557 499 aa13.31□□□□□ -0.28
LMX1B-202ENST00000373474 GRM7Q14831 915 aa13.31□□□□□ -0.28
LMX1B-202ENST00000373474 PGGHGQ32M88 737 aa13.31□□□□□ -0.28
LMX1B-202ENST00000373474 NHSL2Q5HYW2 709 aa13.31□□□□□ -0.28
LMX1B-202ENST00000373474 CYB561A3Q8NBI2 242 aa13.31□□□□□ -0.28
LMX1B-202ENST00000373474 ZNF296Q8WUU4 475 aaPredicted RBP13.31□□□□□ -0.28
LMX1B-202ENST00000373474 PITX2Q99697 317 aa13.31□□□□□ -0.28
LMX1B-202ENST00000373474 HRH4Q9H3N8 390 aa13.31□□□□□ -0.28
LMX1B-202ENST00000373474 RAB9BQ9NP90 201 aa13.31□□□□□ -0.28
LMX1B-202ENST00000373474 HBA1P69905 142 aa13.31□□□□□ -0.28
LMX1B-202ENST00000373474 TATDN3Q17R31 274 aa13.31□□□□□ -0.28
LMX1B-202ENST00000373474 RAB39BQ96DA2 213 aa13.31□□□□□ -0.28
LMX1B-202ENST00000373474 GMPR2Q9P2T1 348 aaKnown RBP13.31□□□□□ -0.28
LMX1B-202ENST00000373474 KLF15Q9UIH9 416 aa13.31□□□□□ -0.28
LMX1B-202ENST00000373474 ENTPD2Q9Y5L3 495 aa13.31□□□□□ -0.28
LMX1B-202ENST00000373474 HEMK1Q9Y5R4 338 aaPredicted RBP13.31□□□□□ -0.28
LMX1B-202ENST00000373474 A0A1W2PQ09 198 aa13.31□□□□□ -0.28
LMX1B-202ENST00000373474 TSPAN11A1L157 253 aa13.31□□□□□ -0.28
LMX1B-202ENST00000373474 ICMTO60725 284 aa13.31□□□□□ -0.28
LMX1B-202ENST00000373474 FUT1P19526 365 aa13.31□□□□□ -0.28
LMX1B-202ENST00000373474 TTLL10Q6ZVT0 673 aa13.31□□□□□ -0.28
LMX1B-202ENST00000373474 GAREM2Q75VX8 874 aa13.31□□□□□ -0.28
LMX1B-202ENST00000373474 TMPRSS7Q7RTY8 843 aa13.31□□□□□ -0.28
LMX1B-202ENST00000373474 OR52E1Q8NGJ3 308 aa13.31□□□□□ -0.28
LMX1B-202ENST00000373474 OR51L1Q8NGJ5 315 aa13.31□□□□□ -0.28
LMX1B-202ENST00000373474 C4orf36Q96KX1 117 aa13.31□□□□□ -0.28
LMX1B-202ENST00000373474 OR1F2PQ96R84 312 aa13.31□□□□□ -0.28
LMX1B-202ENST00000373474 NTN4Q9HB63 628 aa13.31□□□□□ -0.28
LMX1B-202ENST00000373474 ZNF546Q86UE3 836 aa13.31□□□□□ -0.28
LMX1B-202ENST00000373474 SLC39A11Q8N1S5 342 aa13.31□□□□□ -0.28
LMX1B-202ENST00000373474 CHTF18Q8WVB6 975 aa13.31□□□□□ -0.28
LMX1B-202ENST00000373474 NMNAT2Q9BZQ4 307 aa13.31□□□□□ -0.28
LMX1B-202ENST00000373474 LOC105369274A0A096LPK9 316 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 ARGFXA6NJG6 315 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 BHLHE40O14503 412 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 KNG1P01042 644 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 HBE1P02100 147 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 NFYAP23511 347 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms