RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 ENTPD4Q9Y227 616 aa12.71□□□□□ -0.38
USP49-201ENST00000373006 FKBP7Q9Y680 259 aa12.71□□□□□ -0.38
USP49-201ENST00000373006 H0YC42 278 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 SYT5O00445 386 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 SIX6O95475 246 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 PTHLHP12272 177 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 BMP7P18075 431 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 GDI2P50395 445 aaKnown RBP12.7□□□□□ -0.38
USP49-201ENST00000373006 IKZF1Q13422 519 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 CAMK1Q14012 370 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 TP53I3Q53FA7 332 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 SFRP5Q5T4F7 317 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 LRFN4Q6PJG9 635 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 SLC39A11Q8N1S5 342 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 MOSPD2Q8NHP6 518 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 FANK1Q8TC84 345 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 ELMOD3Q96FG2 381 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 SLC35A4Q96G79 324 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 PGLYRP3Q96LB9 341 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 DEFB118Q96PH6 123 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 IFT27Q9BW83 186 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 ZNF768Q9H5H4 540 aaKnown RBP12.7□□□□□ -0.38
USP49-201ENST00000373006 WDR26Q9H7D7 661 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 SIDT1Q9NXL6 827 aaKnown RBP12.7□□□□□ -0.38
USP49-201ENST00000373006 FBXL2Q9UKC9 423 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 IGKV1-8A0A0C4DH67 115 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 C17orf113A0A1B0GUU1 675 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 UNC119BA6NIH7 251 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 KHNYNO15037 678 aaKnown RBP12.7□□□□□ -0.38
USP49-201ENST00000373006 AIFM1O95831 613 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 CBX7O95931 251 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 EPXP11678 715 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 IL9P15248 144 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 CERS1P27544 350 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 DEFB103AP81534 67 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 PRR5P85299 388 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 PITPNAQ00169 270 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 MESP2Q0VG99 397 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 KLF9Q13886 244 aaPredicted RBP12.7□□□□□ -0.38
USP49-201ENST00000373006 SLC25A25Q6KCM7 469 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 WDR88Q6ZMY6 472 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 HDDC2Q7Z4H3 204 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 FGD2Q7Z6J4 655 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 GJD3Q8N144 294 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 STPG2Q8N412 459 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 ARL14Q8N4G2 192 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 ACOT4Q8N9L9 421 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 ARID1BQ8NFD5 2236 aaPredicted RBP12.7□□□□□ -0.38
USP49-201ENST00000373006 OR51A7Q8NH64 312 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 DERL3Q96Q80 235 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 C1QTNF2Q9BXJ5 285 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 CA10Q9NS85 328 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 SDHAF2Q9NX18 166 aa12.7□□□□□ -0.38
USP49-201ENST00000373006 LYARQ9NX58 379 aaKnown RBP12.7□□□□□ -0.38
USP49-201ENST00000373006 CXXC1Q9P0U4 656 aaPredicted RBP12.7□□□□□ -0.38
USP49-201ENST00000373006 PRR23D1E9PI22 279 aaPredicted RBP12.69□□□□□ -0.38
USP49-201ENST00000373006 MID1O15344 667 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 PRR23D2P0DMB1 279 aaPredicted RBP12.69□□□□□ -0.38
USP49-201ENST00000373006 CXCL2P19875 107 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 BMP8BP34820 402 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 MAZP56270 477 aaKnown RBP12.69□□□□□ -0.38
USP49-201ENST00000373006 BMP8AQ7Z5Y6 402 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 PXKQ7Z7A4 578 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 OR52L1Q8NGH7 329 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 OR51L1Q8NGJ5 315 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 OR5K2Q8NHB8 316 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 ADAMTS15Q8TE58 950 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 PEX11GQ96HA9 241 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 LGR4Q9BXB1 951 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 COPS3Q9UNS2 423 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 KCNMB2Q9Y691 235 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 hCG_1807616A0A1W2PRN6 198 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 ARPC1BO15143 372 aaKnown RBP12.69□□□□□ -0.38
USP49-201ENST00000373006 RAD52P43351 418 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 CBX5P45973 191 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 ZNF85Q03923 595 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 DGLUCYQ7Z3D6 616 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 OR56A1Q8NGH5 318 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 SMPDL3BQ92485 455 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 CDS1Q92903 461 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 ELP4Q96EB1 424 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 CD180Q99467 661 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 PCDHB16Q9NRJ7 776 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 MGAT4CQ9UBM8 478 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 KLK11Q9UBX7 282 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 POMT2Q9UKY4 750 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 TRAV27A0A087WT01 109 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 TRAV20A0A0B4J274 112 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 CXorf51AA0A1B0GTR3 108 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 BHLHE40O14503 412 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 EMC8O43402 210 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 UGT2B7P16662 529 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 CSNK2A2P19784 350 aaPredicted RBP12.69□□□□□ -0.38
USP49-201ENST00000373006 FOXK2Q01167 660 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 TEAD2Q15562 447 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 HACD4Q5VWC8 232 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 SLC22A10Q63ZE4 541 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 ZNF613Q6PF04 617 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 ATRAIDQ6UW56 229 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 C3P1Q6ZMU1 363 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms