RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 EXOGQ9Y2C4 368 aaKnown RBP4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 PLEKHA6Q9Y2H5 1048 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 ANK1P16157 1881 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 UBE4BO95155 1302 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 DENND4CQ5VZ89 1909 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 ADAMTS9Q9P2N4 1935 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 MYOFQ9NZM1 2061 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 TLN1Q9Y490 2541 aaKnown RBP4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 NUMA1Q14980 2115 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 LRRK2Q5S007 2527 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 PVALEFA0A1B0GWK0 134 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 OR5H15A6NDH6 313 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 MPTX1A8MV57 137 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 PDXKO00764 312 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 INPP4BO15327 924 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 POLR2DO15514 142 aaKnown RBP4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 RRP8O43159 456 aaKnown RBP4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 TXNL1O43396 289 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 SSX5O60225 188 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 DFNA5O60443 496 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 TBL1XO60907 577 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 SOCS5O75159 536 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 ANXA9O76027 345 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 PTBP3O95758 552 aaKnown RBP4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 PRDX6P30041 224 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 CSKP41240 450 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 C21orf59P57076 290 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 GMFBP60983 142 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 RPS24P62847 133 aaKnown RBP4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 RBBP4Q09028 425 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 ZNF177Q13360 481 aaPredicted RBP4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 TTC31Q49AM3 519 aaPredicted RBP4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 DCAF12Q5T6F0 453 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 HIST2H2AA3Q6FI13 130 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 LCLAT1Q6UWP7 414 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 KDM7AQ6ZMT4 941 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 C3P1Q6ZMU1 363 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 Q6ZRG5 221 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 CDHR3Q6ZTQ4 885 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 STXBP4Q6ZWJ1 553 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 STK40Q8N2I9 435 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 ZNF614Q8N883 585 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 OR52K2Q8NGK3 314 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 OR2T34Q8NGX1 318 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 GOLGA5Q8TBA6 731 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 UBA3Q8TBC4 463 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 WBP1Q96G27 269 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 ATXN7L3BQ96GX2 97 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 SERAC1Q96JX3 654 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 PLEKHA3Q9HB20 300 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 IL1RAPQ9NPH3 570 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 CISHQ9NSE2 258 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 HPF1Q9NWY4 346 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 SOHLH2Q9NX45 425 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 TEX10Q9NXF1 929 aaPredicted RBP4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 CGNQ9P2M7 1197 aaKnown RBP4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 SUN2Q9UH99 717 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 XPO7Q9UIA9 1087 aaKnown RBP4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 PLXND1Q9Y4D7 1925 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 BSNQ9UPA5 3926 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 RELNP78509 3460 aa4.67□□□□□ -1.66
RNU4-39P-201ENST00000362455 USP9XQ93008 2570 aaPredicted RBP4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 NBPF19A0A087WUL8 3843 aa4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 LOC105371242A0A075B767 164 aa4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 ZG16O60844 167 aa4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 POLR2EP19388 210 aaKnown RBP4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 MAT2AP31153 395 aaKnown RBP4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 ACADSBP45954 432 aa4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 STK19P49842 368 aaPredicted RBP4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 NDST2P52849 883 aa4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 GSCP56915 257 aaPredicted RBP4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 DAOAP59103 153 aa4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 RPL27P61353 136 aaKnown RBP4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 ERVK-16P61578 105 aa4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 ADIGQ0VDE8 80 aa4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 SRSF6Q13247 344 aaKnown RBP4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 RIGQ13278 110 aa4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 ILKQ13418 452 aa4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 EIF4EBP2Q13542 120 aaPredicted RBP4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 KIAA0141Q14154 515 aaPredicted RBP4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 GOLGA7BQ2TAP0 167 aa4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 LINC00303Q3SY05 128 aa4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 ZCWPW2Q504Y3 356 aa4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 TPRG1LQ5T0D9 272 aa4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 LIPJQ5W064 366 aa4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 RESP18Q5W5W9 173 aa4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 PMF1Q6P1K2 205 aa4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 SLC22A16Q86VW1 577 aa4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 OR52B6Q8NGF0 335 aa4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 OR6F1Q8NGZ6 308 aa4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 PAGE5Q96GU1 130 aa4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 CLMPQ9H6B4 373 aa4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 CNOT2Q9NZN8 540 aaKnown RBP4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 ERVK-18Q9QC07 812 aa4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 CYTH4Q9UIA0 394 aa4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 ERRFI1Q9UJM3 462 aaPredicted RBP4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 ERVW-1Q9UQF0 538 aa4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 TRAF3IP3Q9Y228 551 aa4.66□□□□□ -1.66
RNU4-39P-201ENST00000362455 PTPRBP23467 1997 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms