RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 ADH6P28332 368 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 CAPZA1P52907 286 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 CLDN12P56749 244 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 RPE65Q16518 533 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 FAM69AQ5T7M9 428 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 TMEM184AQ6ZMB5 413 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 OR5L2Q8NGL0 311 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 NPRL2Q8WTW4 380 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 MAFIPQ8WZ33 124 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 GHSRQ92847 366 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 BMFQ96LC9 184 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 C11orf54Q9H0W9 315 aaPredicted RBP12.82□□□□□ -0.36
VCP-201ENST00000358901 NOX3Q9HBY0 568 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 GDE1Q9NZC3 331 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 DIMT1Q9UNQ2 313 aaKnown RBP12.82□□□□□ -0.36
VCP-201ENST00000358901 CA5BQ9Y2D0 317 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 SLX4Q8IY92 1834 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 FAM155AB1AL88 458 aaPredicted RBP12.81□□□□□ -0.36
VCP-201ENST00000358901 CSO75390 466 aaKnown RBP12.81□□□□□ -0.36
VCP-201ENST00000358901 TMEM225BP0DP42 221 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 UBL4AP11441 157 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 RPS19P39019 145 aaKnown RBP12.81□□□□□ -0.36
VCP-201ENST00000358901 GLO1Q04760 184 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 CCINQ13939 588 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 EIF2B1Q14232 305 aaKnown RBP12.81□□□□□ -0.36
VCP-201ENST00000358901 PRAMEF8Q5VWM4 474 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 PRAMEF7Q5VXH5 474 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 SLX4IPQ5VYV7 408 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 FAM71E1Q6IPT2 247 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 P4HA3Q7Z4N8 544 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 PLXDC1Q8IUK5 500 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 MCATQ8IVS2 390 aaKnown RBP12.81□□□□□ -0.36
VCP-201ENST00000358901 MYEOVQ96EZ4 313 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 AMDHD1Q96NU7 426 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 ZNF587Q96SQ5 575 aaPredicted RBP12.81□□□□□ -0.36
VCP-201ENST00000358901 MBOAT4Q96T53 435 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 MRI1Q9BV20 369 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 EIF5A2Q9GZV4 153 aaKnown RBP12.81□□□□□ -0.36
VCP-201ENST00000358901 INPP5EQ9NRR6 644 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 NDRG4Q9ULP0 352 aaKnown RBP12.81□□□□□ -0.36
VCP-201ENST00000358901 N4BP2Q86UW6 1770 aaPredicted RBP12.81□□□□□ -0.36
VCP-201ENST00000358901 A0A1B0GV50 99 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 SOCS6O14544 535 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 SLC16A7O60669 478 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 F13BP05160 661 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 CXADRP78310 365 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 PLP2Q04941 152 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 RIPPLY1Q0D2K3 151 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 CRMP1Q14194 572 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 ERV3-1Q14264 604 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 ZNF750Q32MQ0 723 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 FAM26DQ5JW98 314 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 FAM219BQ5XKK7 198 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 TPRA1Q86W33 373 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 BTBD2Q9BX70 525 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 C1QTNF3Q9BXJ4 246 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 CPNE6O95741 557 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 KNG1P01042 644 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 OR8G3PP0DMU2 310 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 ZNF43P17038 809 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 EIF2DP41214 584 aaKnown RBP12.81□□□□□ -0.36
VCP-201ENST00000358901 MRPS10P82664 201 aaKnown RBP12.81□□□□□ -0.36
VCP-201ENST00000358901 EEF1A1P5Q5VTE0 462 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 CST9Q5W186 159 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 SHISA6Q6ZSJ9 500 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 ZNF765Q7L2R6 523 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 OR5H2Q8NGV7 314 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 TNFRSF13CQ96RJ3 184 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 MAN2C1Q9NTJ4 1040 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 SEC16AO15027 2179 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 PRSS38A1L453 326 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 H0YGG7 62 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 OR2T1O43869 369 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 LILRB3O75022 631 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 MMP11P24347 488 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 HLA-DMAP28067 261 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 CRABP1P29762 137 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 SFTPDP35247 375 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 SNU13P55769 128 aaKnown RBP12.81□□□□□ -0.36
VCP-201ENST00000358901 ARF3P61204 181 aaPredicted RBP12.81□□□□□ -0.36
VCP-201ENST00000358901 PDE7AQ13946 482 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 METAP1DQ6UB28 335 aaPredicted RBP12.81□□□□□ -0.36
VCP-201ENST00000358901 C3P1Q6ZMU1 363 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 LAS2Q8IYD9 372 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 BOLLQ8N9W6 283 aaKnown RBP12.81□□□□□ -0.36
VCP-201ENST00000358901 SLC22A8Q8TCC7 542 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 WBP2Q969T9 261 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 C7orf50Q9BRJ6 194 aaKnown RBP12.81□□□□□ -0.36
VCP-201ENST00000358901 MKRN2Q9H000 416 aaKnown RBP12.81□□□□□ -0.36
VCP-201ENST00000358901 RGCCQ9H4X1 137 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 ZNF442Q9H7R0 627 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 PDFQ9HBH1 243 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 APMAPQ9HDC9 416 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 ATG4BQ9Y4P1 393 aa12.81□□□□□ -0.36
VCP-201ENST00000358901 CEP290O15078 2479 aa12.8□□□□□ -0.36
VCP-201ENST00000358901 SEC14L5O43304 696 aa12.8□□□□□ -0.36
VCP-201ENST00000358901 F3P13726 295 aa12.8□□□□□ -0.36
VCP-201ENST00000358901 APOOLQ6UXV4 268 aa12.8□□□□□ -0.36
VCP-201ENST00000358901 BEND4Q6ZU67 534 aa12.8□□□□□ -0.36
VCP-201ENST00000358901 OR52I1Q8NGK6 324 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms