RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 TLE4Q04727 773 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 PSAPL1Q6NUJ1 521 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 NXPE4Q6UWF7 544 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 POFUT1Q9H488 388 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 SLC22A11Q9NSA0 550 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 C1orf123Q9NWV4 160 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 FAM155AB1AL88 458 aaPredicted RBP8.25□□□□□ -1.09
COL6A6-201ENST00000358511 KHNYNO15037 678 aaKnown RBP8.25□□□□□ -1.09
COL6A6-201ENST00000358511 OR2C1O95371 312 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 HBE1P02100 147 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 SYN1P17600 705 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 CCR6P51684 374 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 NR0B1P51843 470 aaKnown RBP8.25□□□□□ -1.09
COL6A6-201ENST00000358511 GTDC1Q4AE62 458 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 FRMPD2BQ6IN97 320 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 NPAS4Q8IUM7 802 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 DUSP19Q8WTR2 217 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 CHTF18Q8WVB6 975 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 RBMXL1Q96E39 390 aaKnown RBP8.25□□□□□ -1.09
COL6A6-201ENST00000358511 TXN2Q99757 166 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 MCOLN1Q9GZU1 580 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 ZNF442Q9H7R0 627 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 KLHL13Q9P2N7 655 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 SLC7A7Q9UM01 511 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 NDUFB2O95178 105 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 CBLP22681 906 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 CXADRP78310 365 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 GLO1Q04760 184 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 EBPQ15125 230 aaKnown RBP8.25□□□□□ -1.09
COL6A6-201ENST00000358511 TP53I3Q53FA7 332 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 TPGS2Q68CL5 300 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 C1orf87Q8N0U7 546 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 SORCS2Q96PQ0 1159 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 DDOQ99489 341 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 SLC25A21Q9BQT8 299 aaPredicted RBP8.25□□□□□ -1.09
COL6A6-201ENST00000358511 DPH1Q9BZG8 443 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 SRA1Q9HD15 236 aaKnown RBP8.25□□□□□ -1.09
COL6A6-201ENST00000358511 C1GALT1Q9NS00 363 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 CAMK2AQ9UQM7 478 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 POLR2AP24928 1970 aaKnown RBP8.24□□□□□ -1.09
COL6A6-201ENST00000358511 KCNJ13O60928 360 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 FABP1P07148 127 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 ACTR1BP42025 376 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 HMGN2P46Q86SG4 172 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 TRAM1L1Q8N609 369 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 C1QTNF2Q9BXJ5 285 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 ANK1P16157 1881 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 HLA-HP01893 362 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 CD53P19397 219 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 SNRPGP62308 76 aaKnown RBP8.24□□□□□ -1.09
COL6A6-201ENST00000358511 MFGE8Q08431 387 aaPredicted RBP8.24□□□□□ -1.09
COL6A6-201ENST00000358511 PDSS1Q5T2R2 415 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 CMIPQ8IY22 773 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 ZMYND19Q96E35 227 aaPredicted RBP8.24□□□□□ -1.09
COL6A6-201ENST00000358511 TEPSINQ96N21 525 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 DDX31Q9H8H2 851 aaKnown RBP8.24□□□□□ -1.09
COL6A6-201ENST00000358511 CPNE7Q9UBL6 633 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 SCML1Q9UN30 329 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 PMS2P2O95744 297 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 C1QTNF12Q5T7M4 302 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 RPL22L1Q6P5R6 122 aaKnown RBP8.24□□□□□ -1.09
COL6A6-201ENST00000358511 VITQ6UXI7 678 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 MEPCEQ7L2J0 689 aaKnown RBP8.24□□□□□ -1.09
COL6A6-201ENST00000358511 ZSCAN4Q8NAM6 433 aaPredicted RBP8.24□□□□□ -1.09
COL6A6-201ENST00000358511 OR51T1Q8NGJ9 327 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 OR5M3Q8NGP4 307 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 ZNF582Q96NG8 517 aaPredicted RBP8.24□□□□□ -1.09
COL6A6-201ENST00000358511 SLCO5A1Q9H2Y9 848 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 NARFLQ9H6Q4 476 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 NRIP3Q9NQ35 241 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 AKAP6Q13023 2319 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 SYT7O43581 403 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 GIPRP48546 466 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 SP3Q02447 781 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 REM2Q8IYK8 340 aaPredicted RBP8.24□□□□□ -1.09
COL6A6-201ENST00000358511 OR4K17Q8NGC6 315 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 OR8J2Q8NGG1 315 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 OR10R2Q8NGX6 335 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 MYADMQ96S97 322 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 HOXD1Q9GZZ0 328 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 LIN7BQ9HAP6 207 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 NDUFB11Q9NX14 153 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 MPPED1O15442 326 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 DPM1O60762 260 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 APEX1P27695 318 aaKnown RBP8.24□□□□□ -1.09
COL6A6-201ENST00000358511 RPE65Q16518 533 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 CORO6Q6QEF8 472 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 TEX261Q6UWH6 196 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 SBSNQ6UWP8 590 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 RANBP10Q6VN20 620 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 NDUFAF7Q7L592 441 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 CD163Q86VB7 1156 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 OR4D6Q8NGJ1 314 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 RAB3CQ96E17 227 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 RNF170Q96K19 258 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 TMEM43Q9BTV4 400 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 U3KQ87 197 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 A0A0B4J2A0 478 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 ZNF587BE7ETH6 402 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 GPR37L1O60883 481 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms