RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 GIFP27352 417 aa16.4■□□□□ 0.22
RTN4-204ENST00000357732 HTR2AP28223 471 aa16.4■□□□□ 0.22
RTN4-204ENST00000357732 NDUFS1P28331 727 aa16.4■□□□□ 0.22
RTN4-204ENST00000357732 PEBP1P30086 187 aaKnown RBP16.4■□□□□ 0.22
RTN4-204ENST00000357732 TLX1P31314 330 aaPredicted RBP16.4■□□□□ 0.22
RTN4-204ENST00000357732 AGBL4Q5VU57 503 aa16.4■□□□□ 0.22
RTN4-204ENST00000357732 ARHGAP11AQ6P4F7 1023 aa16.4■□□□□ 0.22
RTN4-204ENST00000357732 FAM98AQ8NCA5 519 aaKnown RBP16.4■□□□□ 0.22
RTN4-204ENST00000357732 SMIM4Q8WVI0 70 aa16.4■□□□□ 0.22
RTN4-204ENST00000357732 GHSRQ92847 366 aa16.4■□□□□ 0.22
RTN4-204ENST00000357732 SERINC2Q96SA4 455 aa16.4■□□□□ 0.22
RTN4-204ENST00000357732 MBNL1Q9NR56 388 aaKnown RBP16.4■□□□□ 0.22
RTN4-204ENST00000357732 POLE3Q9NRF9 147 aa16.4■□□□□ 0.22
RTN4-204ENST00000357732 OR6C2Q9NZP2 312 aa16.4■□□□□ 0.22
RTN4-204ENST00000357732 CXXC1Q9P0U4 656 aaPredicted RBP16.4■□□□□ 0.22
RTN4-204ENST00000357732 THAP10Q9P2Z0 257 aaPredicted RBP16.4■□□□□ 0.22
RTN4-204ENST00000357732 ST6GALNAC2Q9UJ37 374 aa16.4■□□□□ 0.22
RTN4-204ENST00000357732 C19orf53Q9UNZ5 99 aaPredicted RBP16.4■□□□□ 0.22
RTN4-204ENST00000357732 SLC17A4Q9Y2C5 497 aa16.4■□□□□ 0.22
RTN4-204ENST00000357732 NUMA1Q14980 2115 aa16.39■□□□□ 0.21
RTN4-204ENST00000357732 A0A087WV62 115 aa16.39■□□□□ 0.21
RTN4-204ENST00000357732 GPR171O14626 319 aa16.39■□□□□ 0.21
RTN4-204ENST00000357732 REM1O75628 298 aa16.39■□□□□ 0.21
RTN4-204ENST00000357732 PCDH8O95206 1070 aa16.39■□□□□ 0.21
RTN4-204ENST00000357732 C4BPBP20851 252 aa16.39■□□□□ 0.21
RTN4-204ENST00000357732 SRP9P49458 86 aaKnown RBP16.39■□□□□ 0.21
RTN4-204ENST00000357732 SNTA1Q13424 505 aa16.39■□□□□ 0.21
RTN4-204ENST00000357732 KLF9Q13886 244 aaPredicted RBP16.39■□□□□ 0.21
RTN4-204ENST00000357732 IRF4Q15306 451 aa16.39■□□□□ 0.21
RTN4-204ENST00000357732 SLC25A35Q3KQZ1 300 aa16.39■□□□□ 0.21
RTN4-204ENST00000357732 WDR45BQ5MNZ6 344 aa16.39■□□□□ 0.21
RTN4-204ENST00000357732 FAM27D1Q5T7N8 215 aa16.39■□□□□ 0.21
RTN4-204ENST00000357732 GPR139Q6DWJ6 353 aa16.39■□□□□ 0.21
RTN4-204ENST00000357732 WDR88Q6ZMY6 472 aa16.39■□□□□ 0.21
RTN4-204ENST00000357732 PAQR7Q86WK9 346 aa16.39■□□□□ 0.21
RTN4-204ENST00000357732 C17orf47Q8NEP4 570 aa16.39■□□□□ 0.21
RTN4-204ENST00000357732 SMIM19Q96E16 107 aa16.39■□□□□ 0.21
RTN4-204ENST00000357732 DPP7Q9UHL4 492 aa16.39■□□□□ 0.21
RTN4-204ENST00000357732 OR1A2Q9Y585 309 aa16.39■□□□□ 0.21
RTN4-204ENST00000357732 COLEC10Q9Y6Z7 277 aa16.39■□□□□ 0.21
RTN4-204ENST00000357732 ZC3H12DA2A288 527 aaKnown RBP16.38■□□□□ 0.21
RTN4-204ENST00000357732 NAP1L6A6NFF2 107 aa16.38■□□□□ 0.21
RTN4-204ENST00000357732 LATO43561 262 aa16.38■□□□□ 0.21
RTN4-204ENST00000357732 PTP4A3O75365 173 aa16.38■□□□□ 0.21
RTN4-204ENST00000357732 PDGFAP04085 211 aa16.38■□□□□ 0.21
RTN4-204ENST00000357732 UCHL1P09936 223 aa16.38■□□□□ 0.21
RTN4-204ENST00000357732 SNTB2Q13425 540 aaKnown RBP16.38■□□□□ 0.21
RTN4-204ENST00000357732 CAMK2DQ13557 499 aa16.38■□□□□ 0.21
RTN4-204ENST00000357732 SUZ12Q15022 739 aaKnown RBP16.38■□□□□ 0.21
RTN4-204ENST00000357732 TIGD4Q8IY51 512 aa16.38■□□□□ 0.21
RTN4-204ENST00000357732 POMGNT2Q8NAT1 580 aa16.38■□□□□ 0.21
RTN4-204ENST00000357732 PFN4Q8NHR9 129 aa16.38■□□□□ 0.21
RTN4-204ENST00000357732 NXPE2Q96DL1 559 aa16.38■□□□□ 0.21
RTN4-204ENST00000357732 ZNF559Q9BR84 538 aa16.38■□□□□ 0.21
RTN4-204ENST00000357732 PLEKHA1Q9HB21 404 aa16.38■□□□□ 0.21
RTN4-204ENST00000357732 C20orf141Q9NUB4 165 aa16.38■□□□□ 0.21
RTN4-204ENST00000357732 KCNK6Q9Y257 313 aa16.38■□□□□ 0.21
RTN4-204ENST00000357732 C5orf42Q9H799 3197 aa16.38■□□□□ 0.21
RTN4-204ENST00000357732 ECDO95905 644 aaPredicted RBP16.38■□□□□ 0.21
RTN4-204ENST00000357732 SLC35G6P0C7Q6 338 aa16.38■□□□□ 0.21
RTN4-204ENST00000357732 POU3F3P20264 500 aaPredicted RBP16.38■□□□□ 0.21
RTN4-204ENST00000357732 NT5EP21589 574 aa16.38■□□□□ 0.21
RTN4-204ENST00000357732 RBM34P42696 430 aaKnown RBP16.38■□□□□ 0.21
RTN4-204ENST00000357732 GPR68Q15743 365 aa16.38■□□□□ 0.21
RTN4-204ENST00000357732 UBE2NLQ5JXB2 153 aa16.38■□□□□ 0.21
RTN4-204ENST00000357732 DCST2Q5T1A1 773 aa16.38■□□□□ 0.21
RTN4-204ENST00000357732 MRPL2Q5T653 305 aaKnown RBP16.38■□□□□ 0.21
RTN4-204ENST00000357732 RTL4Q6ZR62 310 aa16.38■□□□□ 0.21
RTN4-204ENST00000357732 SLITRK4Q8IW52 837 aa16.38■□□□□ 0.21
RTN4-204ENST00000357732 OR8H3Q8N146 312 aa16.38■□□□□ 0.21
RTN4-204ENST00000357732 CDRT4Q8N9R6 151 aa16.38■□□□□ 0.21
RTN4-204ENST00000357732 MRPL48Q96GC5 212 aaKnown RBP16.38■□□□□ 0.21
RTN4-204ENST00000357732 OR51V1Q9H2C8 321 aa16.38■□□□□ 0.21
RTN4-204ENST00000357732 KCMF1Q9P0J7 381 aa16.38■□□□□ 0.21
RTN4-204ENST00000357732 URADA6NGE7 173 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 TGM6O95932 706 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 OR2T7P0C7T2 308 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 ZNF10P21506 573 aaPredicted RBP16.37■□□□□ 0.21
RTN4-204ENST00000357732 SLC6A6P31641 620 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 SLC16A1P53985 500 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 OR12D2P58182 307 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 GGTLC2Q14390 218 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 GRK1Q15835 563 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 FAAH2Q6GMR7 532 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 THSD4Q6ZMP0 1018 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 OR11H4Q8NGC9 324 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 OR2T27Q8NH04 317 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 GIMAP1Q8WWP7 306 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 PAWRQ96IZ0 340 aaKnown RBP16.37■□□□□ 0.21
RTN4-204ENST00000357732 MRI1Q9BV20 369 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 ENKD1Q9H0I2 346 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 C6orf106Q9H6K1 298 aaPredicted RBP16.37■□□□□ 0.21
RTN4-204ENST00000357732 SPHK1Q9NYA1 384 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 UBQLN2Q9UHD9 624 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 OR5K3A6NET4 321 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 TRABD2BA6NFA1 517 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 PEX14O75381 377 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 CD3GP09693 182 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 IL9P15248 144 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 ATF1P18846 271 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms