RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 GRM7Q14831 915 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 DUSP6Q16828 381 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 EXOSC6Q5RKV6 272 aaKnown RBP10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 CD276Q5ZPR3 534 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 HIST2H3AQ71DI3 136 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 KIAA0907Q7Z7F0 614 aaPredicted RBP10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 FAM160A2Q8N612 972 aaPredicted RBP10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 ZNF439Q8NDP4 499 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 GINS3Q9BRX5 216 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 CNTNAP3Q9BZ76 1288 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 C20orf202A1L168 122 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 C1QBP02746 253 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 S100A7P31151 101 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 ZXDBP98169 803 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 OPCMLQ14982 345 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 HIST2H3PS2Q5TEC6 136 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 ACOT11Q8WXI4 607 aaPredicted RBP10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 RBMXL1Q96E39 390 aaKnown RBP10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 HCAR1Q9BXC0 346 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 SFXN1Q9H9B4 322 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 HRASLSQ9HDD0 168 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 ACKR4Q9NPB9 350 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 CAPNS1P04632 268 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 FBXO45P0C2W1 286 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 PRPH2P23942 346 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 MAGEB1P43366 347 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 TAS2R38P59533 333 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 SELENOWP63302 87 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 NXPE4Q6UWF7 544 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 SLC5A8Q8N695 610 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 BMFQ96LC9 184 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 SAMD8Q96LT4 415 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 FOXN4Q96NZ1 517 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 ALG8Q9BVK2 526 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 USP36Q9P275 1121 aaKnown RBP10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 ARPC1BO15143 372 aaKnown RBP10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 HLA-DMAP28067 261 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 KHDC1LQ5JSQ8 128 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 SERPINA12Q8IW75 414 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 LFNGQ8NES3 379 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 TPSD1Q9BZJ3 242 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 GAREM1Q9H706 876 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 SLC23A2Q9UGH3 650 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 RPS10-NUDT3A0A1W2PQS6 291 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 ALPLP05186 524 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 FDXRP22570 491 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 PTAFRP25105 342 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 RPS10P46783 165 aaKnown RBP10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 SEC61A1P61619 476 aaKnown RBP10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 SPCS2Q15005 226 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 PIWIL3Q7Z3Z3 882 aaKnown RBP10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 RBMXL3Q8N7X1 1067 aaKnown RBP10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 B3GNT7Q8NFL0 401 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 OR2T27Q8NH04 317 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 NUPL2O15504 423 aaKnown RBP10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 ACTBL2Q562R1 376 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 SLC6A19Q695T7 634 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 TSSK4Q6SA08 328 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 S100A7AQ86SG5 101 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 OR5L1Q8NGL2 311 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 PPP1R35Q8TAP8 253 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 UHRF1Q96T88 793 aaPredicted RBP10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 CPEB1Q9BZB8 566 aaKnown RBP10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 SLC25A18Q9H1K4 315 aa10.82□□□□□ -0.68
SPTBN1-202ENST00000356805 G3V2L1 256 aa10.81□□□□□ -0.68
SPTBN1-202ENST00000356805 APOA2P02652 100 aa10.81□□□□□ -0.68
SPTBN1-202ENST00000356805 DEFA4P12838 97 aa10.81□□□□□ -0.68
SPTBN1-202ENST00000356805 POU3F2P20265 443 aaPredicted RBP10.81□□□□□ -0.68
SPTBN1-202ENST00000356805 CPZQ66K79 652 aa10.81□□□□□ -0.68
SPTBN1-202ENST00000356805 C14orf80Q86SX3 495 aa10.81□□□□□ -0.68
SPTBN1-202ENST00000356805 RAB7BQ96AH8 199 aa10.81□□□□□ -0.68
SPTBN1-202ENST00000356805 ZNF689Q96CS4 500 aaPredicted RBP10.81□□□□□ -0.68
SPTBN1-202ENST00000356805 IMP4Q96G21 291 aaKnown RBP10.81□□□□□ -0.68
SPTBN1-202ENST00000356805 DPH1Q9BZG8 443 aa10.81□□□□□ -0.68
SPTBN1-202ENST00000356805 NOX3Q9HBY0 568 aa10.81□□□□□ -0.68
SPTBN1-202ENST00000356805 FBXO8Q9NRD0 319 aa10.81□□□□□ -0.68
SPTBN1-202ENST00000356805 C5AR2Q9P296 337 aa10.81□□□□□ -0.68
SPTBN1-202ENST00000356805 MCTS1Q9ULC4 181 aaKnown RBP10.81□□□□□ -0.68
SPTBN1-202ENST00000356805 TSPAN11A1L157 253 aa10.81□□□□□ -0.68
SPTBN1-202ENST00000356805 SIX1Q15475 284 aaPredicted RBP10.81□□□□□ -0.68
SPTBN1-202ENST00000356805 UBE2NLQ5JXB2 153 aa10.81□□□□□ -0.68
SPTBN1-202ENST00000356805 MEX3DQ86XN8 651 aaKnown RBP10.81□□□□□ -0.68
SPTBN1-202ENST00000356805 OR4K5Q8NGD3 323 aa10.81□□□□□ -0.68
SPTBN1-202ENST00000356805 HERPUD2Q9BSE4 406 aa10.81□□□□□ -0.68
SPTBN1-202ENST00000356805 CUTCQ9NTM9 273 aa10.81□□□□□ -0.68
SPTBN1-202ENST00000356805 ZNF791Q3KP31 576 aaPredicted RBP10.81□□□□□ -0.68
SPTBN1-202ENST00000356805 PDLIM3Q53GG5 364 aaPredicted RBP10.81□□□□□ -0.68
SPTBN1-202ENST00000356805 IER5LQ5T953 404 aa10.81□□□□□ -0.68
SPTBN1-202ENST00000356805 CD163Q86VB7 1156 aa10.81□□□□□ -0.68
SPTBN1-202ENST00000356805 SULF2Q8IWU5 870 aa10.81□□□□□ -0.68
SPTBN1-202ENST00000356805 KLHDC8AQ8IYD2 350 aa10.81□□□□□ -0.68
SPTBN1-202ENST00000356805 MICU1Q9BPX6 476 aa10.81□□□□□ -0.68
SPTBN1-202ENST00000356805 BTBD2Q9BX70 525 aa10.81□□□□□ -0.68
SPTBN1-202ENST00000356805 RAB27BO00194 218 aa10.81□□□□□ -0.68
SPTBN1-202ENST00000356805 GPRIN2O60269 458 aa10.81□□□□□ -0.68
SPTBN1-202ENST00000356805 APBB3O95704 486 aa10.81□□□□□ -0.68
SPTBN1-202ENST00000356805 GIFP27352 417 aa10.81□□□□□ -0.68
SPTBN1-202ENST00000356805 IL13RA1P78552 427 aa10.81□□□□□ -0.68
SPTBN1-202ENST00000356805 ZNF704Q6ZNC4 412 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms