RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 ZFP64Q9NPA5 681 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 A0A1W2PP55 124 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 TSPAN11A1L157 253 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 TRAPPC13A5PLN9 417 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 SLC22A31A6NKX4 558 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 B8ZZF3 427 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 RCBTB2O95199 551 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 ZGLP1P0C6A0 271 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 HK1P19367 917 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 EXOSC7Q15024 291 aaKnown RBP12.39□□□□□ -0.43
NCDN-201ENST00000356090 MAPK14Q16539 360 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 C11orf88Q6PI97 169 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 FRRS1Q6ZNA5 592 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 TRILQ7L0X0 811 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 NRROSQ86YC3 692 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 LRRC25Q8N386 305 aaPredicted RBP12.39□□□□□ -0.43
NCDN-201ENST00000356090 SPERTQ8NA61 448 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 MTHFD2LQ9H903 347 aaPredicted RBP12.39□□□□□ -0.43
NCDN-201ENST00000356090 PRDM7Q9NQW5 492 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 GTF2A1LQ9UNN4 478 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 MAB21L2Q9Y586 359 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 SYT5O00445 386 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 GMFGO60234 142 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 FMO6PO60774 539 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 ZIC2O95409 532 aaPredicted RBP12.39□□□□□ -0.43
NCDN-201ENST00000356090 CFDP00746 253 aaPredicted RBP12.39□□□□□ -0.43
NCDN-201ENST00000356090 TFP02787 698 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 ANKRD34CP0C6C1 535 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 CMPK1P30085 196 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 GDI2P50395 445 aaKnown RBP12.39□□□□□ -0.43
NCDN-201ENST00000356090 MLF2Q15773 248 aaPredicted RBP12.39□□□□□ -0.43
NCDN-201ENST00000356090 GRK1Q15835 563 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 TMEM35AQ53FP2 167 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 SSX6Q7RTT6 188 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 UBE2Q1Q7Z7E8 422 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 ZNF485Q8NCK3 441 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 OR2M2Q96R28 347 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 TNFRSF13CQ96RJ3 184 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 C12orf4Q9NQ89 552 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 IGHA1P01876 353 aa12.38□□□□□ -0.43
NCDN-201ENST00000356090 SBK2P0C263 348 aa12.38□□□□□ -0.43
NCDN-201ENST00000356090 FRKP42685 505 aaPredicted RBP12.38□□□□□ -0.43
NCDN-201ENST00000356090 PITPNAQ00169 270 aa12.38□□□□□ -0.43
NCDN-201ENST00000356090 GALEQ14376 348 aa12.38□□□□□ -0.43
NCDN-201ENST00000356090 LGALSLQ3ZCW2 172 aaPredicted RBP12.38□□□□□ -0.43
NCDN-201ENST00000356090 HDDC3Q8N4P3 179 aa12.38□□□□□ -0.43
NCDN-201ENST00000356090 PTP4A1Q93096 173 aa12.38□□□□□ -0.43
NCDN-201ENST00000356090 PEX11GQ96HA9 241 aa12.38□□□□□ -0.43
NCDN-201ENST00000356090 GHITMQ9H3K2 345 aa12.38□□□□□ -0.43
NCDN-201ENST00000356090 TMEM27Q9HBJ8 222 aa12.38□□□□□ -0.43
NCDN-201ENST00000356090 SLC6A20Q9NP91 592 aa12.38□□□□□ -0.43
NCDN-201ENST00000356090 EMC7Q9NPA0 242 aa12.38□□□□□ -0.43
NCDN-201ENST00000356090 ADAM29Q9UKF5 820 aa12.38□□□□□ -0.43
NCDN-201ENST00000356090 L7N2F9 121 aa12.38□□□□□ -0.43
NCDN-201ENST00000356090 ZNF593O00488 134 aaPredicted RBP12.38□□□□□ -0.43
NCDN-201ENST00000356090 TPPPO94811 219 aa12.38□□□□□ -0.43
NCDN-201ENST00000356090 CXCL10P02778 98 aa12.38□□□□□ -0.43
NCDN-201ENST00000356090 SELENOPP49908 381 aa12.38□□□□□ -0.43
NCDN-201ENST00000356090 GBX2P52951 348 aaPredicted RBP12.38□□□□□ -0.43
NCDN-201ENST00000356090 BTN1A1Q13410 526 aa12.38□□□□□ -0.43
NCDN-201ENST00000356090 MFSD12Q6NUT3 480 aa12.38□□□□□ -0.43
NCDN-201ENST00000356090 WDR88Q6ZMY6 472 aa12.38□□□□□ -0.43
NCDN-201ENST00000356090 RTL4Q6ZR62 310 aa12.38□□□□□ -0.43
NCDN-201ENST00000356090 GPALPP1Q8IXQ4 340 aa12.38□□□□□ -0.43
NCDN-201ENST00000356090 SRFBP1Q8NEF9 429 aaKnown RBP12.38□□□□□ -0.43
NCDN-201ENST00000356090 YIPF5Q969M3 257 aa12.38□□□□□ -0.43
NCDN-201ENST00000356090 LINC00615Q96LM1 132 aaPredicted RBP12.38□□□□□ -0.43
NCDN-201ENST00000356090 ARHGDIGQ99819 225 aa12.38□□□□□ -0.43
NCDN-201ENST00000356090 TMEM138Q9NPI0 162 aa12.38□□□□□ -0.43
NCDN-201ENST00000356090 PHPT1Q9NRX4 125 aaPredicted RBP12.38□□□□□ -0.43
NCDN-201ENST00000356090 EXOGQ9Y2C4 368 aaKnown RBP12.38□□□□□ -0.43
NCDN-201ENST00000356090 OTOL1A6NHN0 477 aaPredicted RBP12.37□□□□□ -0.43
NCDN-201ENST00000356090 PCP4L1A6NKN8 68 aa12.37□□□□□ -0.43
NCDN-201ENST00000356090 GRXCR1A8MXD5 290 aa12.37□□□□□ -0.43
NCDN-201ENST00000356090 MOSPD3O75425 235 aa12.37□□□□□ -0.43
NCDN-201ENST00000356090 GABRA3P34903 492 aa12.37□□□□□ -0.43
NCDN-201ENST00000356090 NOGQ13253 232 aa12.37□□□□□ -0.43
NCDN-201ENST00000356090 HSD17B12Q53GQ0 312 aa12.37□□□□□ -0.43
NCDN-201ENST00000356090 LILRA6Q6PI73 481 aa12.37□□□□□ -0.43
NCDN-201ENST00000356090 VITQ6UXI7 678 aa12.37□□□□□ -0.43
NCDN-201ENST00000356090 OR4K14Q8NGD5 310 aa12.37□□□□□ -0.43
NCDN-201ENST00000356090 OR14C36Q8NHC7 312 aa12.37□□□□□ -0.43
NCDN-201ENST00000356090 FGF11Q92914 225 aa12.37□□□□□ -0.43
NCDN-201ENST00000356090 FAM83CQ9BQN1 747 aa12.37□□□□□ -0.43
NCDN-201ENST00000356090 C11orf49Q9H6J7 331 aa12.37□□□□□ -0.43
NCDN-201ENST00000356090 SNRNP200O75643 2136 aaKnown RBP12.37□□□□□ -0.43
NCDN-201ENST00000356090 FXYD6-FXYD2A0A087WZ82 144 aa12.37□□□□□ -0.43
NCDN-201ENST00000356090 GMDSO60547 372 aa12.37□□□□□ -0.43
NCDN-201ENST00000356090 ADRB1P08588 477 aa12.37□□□□□ -0.43
NCDN-201ENST00000356090 TLX1P31314 330 aaPredicted RBP12.37□□□□□ -0.43
NCDN-201ENST00000356090 PRKAR1BP31321 381 aa12.37□□□□□ -0.43
NCDN-201ENST00000356090 ZNF658BQ4V348 819 aaPredicted RBP12.37□□□□□ -0.43
NCDN-201ENST00000356090 CD276Q5ZPR3 534 aa12.37□□□□□ -0.43
NCDN-201ENST00000356090 ALKAL2Q6UX46 152 aa12.37□□□□□ -0.43
NCDN-201ENST00000356090 TMEM64Q6YI46 380 aa12.37□□□□□ -0.43
NCDN-201ENST00000356090 ZNF782Q6ZMW2 699 aaPredicted RBP12.37□□□□□ -0.43
NCDN-201ENST00000356090 FCRLAQ7L513 359 aa12.37□□□□□ -0.43
NCDN-201ENST00000356090 FGD2Q7Z6J4 655 aa12.37□□□□□ -0.43
NCDN-201ENST00000356090 LIX1LQ8IVB5 337 aa12.37□□□□□ -0.43
NCDN-201ENST00000356090 SLAIN1Q8ND83 568 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms