RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 EGLN2Q96KS0 407 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 OR6C1Q96RD1 312 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 TMEM269A0A1B0GVZ9 245 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 CBX7O95931 251 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 TAS2R31P59538 309 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 SERPINA12Q8IW75 414 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 DCUN1D4Q92564 292 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 SSX3Q99909 188 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 ARNT2Q9HBZ2 717 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 GPR45Q9Y5Y3 372 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 ARNTLO00327 626 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 IFNA4P05014 189 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 DHRS4L1P0CG22 281 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 GABRA2P47869 451 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 RPP30P78346 268 aaKnown RBP16.86■□□□□ 0.29
COL18A1-202ENST00000355480 PDZD9Q8IXQ8 264 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 GTPBP8Q8N3Z3 284 aaPredicted RBP16.86■□□□□ 0.29
COL18A1-202ENST00000355480 UTP23Q9BRU9 249 aaKnown RBP16.86■□□□□ 0.29
COL18A1-202ENST00000355480 CLMPQ9H6B4 373 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 CCL26Q9Y258 94 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 RFXAPO00287 272 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 PTHP01270 115 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 TMEM176BQ3YBM2 270 aaPredicted RBP16.86■□□□□ 0.29
COL18A1-202ENST00000355480 LRRC18Q8N456 261 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 OR1J4Q8NGS1 313 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 NDNFQ8TB73 568 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 C3orf30Q96M34 536 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 B4DXG7 233 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 LILRB5O75023 590 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 SLC43A1O75387 559 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 EFNA3P52797 238 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 GPR139Q6DWJ6 353 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 ATOH1Q92858 354 aaPredicted RBP16.86■□□□□ 0.29
COL18A1-202ENST00000355480 BORCS7Q96B45 105 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 MRI1Q9BV20 369 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 ANKRD60Q9BZ19 345 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 EVA1AQ9H8M9 152 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 LRFN1Q9P244 771 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 LOC105369274A0A096LPK9 316 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 IFNA10P01566 189 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 MSL3P1P0C860 447 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 SERPINA2P20848 420 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 AFF3P51826 1226 aaKnown RBP16.85■□□□□ 0.29
COL18A1-202ENST00000355480 ATP1B3P54709 279 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 MANEAQ5SRI9 462 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 OR4N4Q8N0Y3 316 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 FBXO27Q8NI29 283 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 SLC6A20Q9NP91 592 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 NUP188Q5SRE5 1749 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 ATXN1LP0C7T5 689 aaKnown RBP16.85■□□□□ 0.29
COL18A1-202ENST00000355480 PRAMEF20Q5VT98 475 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 SLC6A19Q695T7 634 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 ZNF775Q96BV0 537 aaPredicted RBP16.85■□□□□ 0.29
COL18A1-202ENST00000355480 RAB39BQ96DA2 213 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 VN1R3Q9BXE9 311 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 TEX10Q9NXF1 929 aaPredicted RBP16.85■□□□□ 0.29
COL18A1-202ENST00000355480 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 C17orf113A0A1B0GUU1 675 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 FAM183AA6NL82 134 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 TRAPPC2LH3BP13 241 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 TNFSF12O43508 249 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 ZNF780AO75290 641 aaPredicted RBP16.85■□□□□ 0.29
COL18A1-202ENST00000355480 CX3CR1P49238 355 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 ZNF136P52737 540 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 GPR18Q14330 331 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 ZNF845Q96IR2 970 aaPredicted RBP16.85■□□□□ 0.29
COL18A1-202ENST00000355480 ATOH8Q96SQ7 321 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 WDR83Q9BRX9 315 aaKnown RBP16.85■□□□□ 0.29
COL18A1-202ENST00000355480 TSPAN10Q9H1Z9 355 aaPredicted RBP16.85■□□□□ 0.29
COL18A1-202ENST00000355480 PKDCCQ504Y2 493 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 VHLLQ6RSH7 139 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 GDPGP1Q6ZNW5 385 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 MEPCEQ7L2J0 689 aaKnown RBP16.85■□□□□ 0.29
COL18A1-202ENST00000355480 SLC16A14Q7RTX9 510 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 ADIPOR2Q86V24 386 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 TXLNGYQ9BZA5 131 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 OR2B2Q9GZK3 357 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 FAM155AB1AL88 458 aaPredicted RBP16.85■□□□□ 0.29
COL18A1-202ENST00000355480 F13BP05160 661 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 AKAIN1P0CW23 69 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 MAGEA6P43360 314 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 TAS2R20P59543 309 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 DCDP81605 110 aaKnown RBP16.85■□□□□ 0.29
COL18A1-202ENST00000355480 PGGHGQ32M88 737 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 CNTN4Q8IWV2 1026 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 RLIMQ9NVW2 624 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 OR14J1Q9UGF5 321 aa16.85■□□□□ 0.29
COL18A1-202ENST00000355480 A0A087WUU8 490 aa16.84■□□□□ 0.29
COL18A1-202ENST00000355480 ZNF264O43296 627 aa16.84■□□□□ 0.29
COL18A1-202ENST00000355480 SPOCK1Q08629 439 aa16.84■□□□□ 0.29
COL18A1-202ENST00000355480 RIPPLY1Q0D2K3 151 aa16.84■□□□□ 0.29
COL18A1-202ENST00000355480 OR7E24Q6IFN5 339 aa16.84■□□□□ 0.29
COL18A1-202ENST00000355480 ZBED3Q96IU2 234 aaPredicted RBP16.84■□□□□ 0.29
COL18A1-202ENST00000355480 GORASP2Q9H8Y8 452 aa16.84■□□□□ 0.29
COL18A1-202ENST00000355480 GCM1Q9NP62 436 aa16.84■□□□□ 0.29
COL18A1-202ENST00000355480 NGBQ9NPG2 151 aa16.84■□□□□ 0.29
COL18A1-202ENST00000355480 ACSS1Q9NUB1 689 aaPredicted RBP16.84■□□□□ 0.29
COL18A1-202ENST00000355480 KCNK5O95279 499 aa16.84■□□□□ 0.29
COL18A1-202ENST00000355480 SSR4P51571 173 aa16.84■□□□□ 0.29
COL18A1-202ENST00000355480 TNFRSF17Q02223 184 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms