RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 ADRA2AP08913 450 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 NR0B1P51843 470 aaKnown RBP15.76■□□□□ 0.11
VPS13B-201ENST00000355155 SLC26A5P58743 744 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 RPS4XP62701 263 aaKnown RBP15.76■□□□□ 0.11
VPS13B-201ENST00000355155 PLCXD2Q0VAA5 305 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 NNATQ16517 81 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 KLHL22Q53GT1 634 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 C3orf38Q5JPI3 329 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 NXNL2Q5VZ03 156 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 STX19Q8N4C7 294 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 SPRY4Q9C004 299 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 CCDC90BQ9GZT6 254 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 ZNF700Q9H0M5 742 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 EFCAB9A8MZ26 197 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 ETV2O00321 342 aaPredicted RBP15.76■□□□□ 0.11
VPS13B-201ENST00000355155 ATE1O95260 518 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 IL12BP29460 328 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 C21orf33P30042 268 aaPredicted RBP15.76■□□□□ 0.11
VPS13B-201ENST00000355155 SNAPC1Q16533 368 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 TMEM81Q6P7N7 255 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 LYPD8Q6UX82 237 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 LINC00299Q6ZSB3 139 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 OR5L2Q8NGL0 311 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 FANK1Q8TC84 345 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 TTC9Q92623 222 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 LIN37Q96GY3 246 aaPredicted RBP15.76■□□□□ 0.11
VPS13B-201ENST00000355155 IL4I1Q96RQ9 567 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 DDA1Q9BW61 102 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 DPH1Q9BZG8 443 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 RPS6KB2Q9UBS0 482 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 B3GALT1Q9Y5Z6 326 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 IGKV1D-42A0A075B6H8 117 aa15.75■□□□□ 0.11
VPS13B-201ENST00000355155 OIP5O43482 229 aa15.75■□□□□ 0.11
VPS13B-201ENST00000355155 FZD7O75084 574 aa15.75■□□□□ 0.11
VPS13B-201ENST00000355155 FADS2O95864 444 aaKnown RBP15.75■□□□□ 0.11
VPS13B-201ENST00000355155 NUDT6P53370 316 aa15.75■□□□□ 0.11
VPS13B-201ENST00000355155 SUMO3P55854 103 aaPredicted RBP15.75■□□□□ 0.11
VPS13B-201ENST00000355155 HSDL2Q6YN16 418 aa15.75■□□□□ 0.11
VPS13B-201ENST00000355155 SLC46A3Q7Z3Q1 461 aa15.75■□□□□ 0.11
VPS13B-201ENST00000355155 ELP5Q8TE02 316 aa15.75■□□□□ 0.11
VPS13B-201ENST00000355155 NAA50Q9GZZ1 169 aaKnown RBP15.75■□□□□ 0.11
VPS13B-201ENST00000355155 IGLV3-32A0A0A0MS00 114 aa15.75■□□□□ 0.11
VPS13B-201ENST00000355155 CCDC160A6NGH7 325 aa15.75■□□□□ 0.11
VPS13B-201ENST00000355155 M0R3G1 203 aa15.75■□□□□ 0.11
VPS13B-201ENST00000355155 TLX2O43763 284 aaPredicted RBP15.75■□□□□ 0.11
VPS13B-201ENST00000355155 PRKNO60260 465 aaPredicted RBP15.75■□□□□ 0.11
VPS13B-201ENST00000355155 IGHEP01854 428 aa15.75■□□□□ 0.11
VPS13B-201ENST00000355155 ZNF28P17035 718 aa15.75■□□□□ 0.11
VPS13B-201ENST00000355155 FOXK2Q01167 660 aa15.75■□□□□ 0.11
VPS13B-201ENST00000355155 TCEAL6Q6IPX3 200 aa15.75■□□□□ 0.11
VPS13B-201ENST00000355155 PAPD4Q6PIY7 484 aaKnown RBP15.75■□□□□ 0.11
VPS13B-201ENST00000355155 TCEAL3Q969E4 200 aa15.75■□□□□ 0.11
VPS13B-201ENST00000355155 RFKQ969G6 155 aa15.75■□□□□ 0.11
VPS13B-201ENST00000355155 LRR1Q96L50 414 aa15.75■□□□□ 0.11
VPS13B-201ENST00000355155 SAMD8Q96LT4 415 aa15.75■□□□□ 0.11
VPS13B-201ENST00000355155 LPAR4Q99677 370 aa15.75■□□□□ 0.11
VPS13B-201ENST00000355155 B3GNT4Q9C0J1 378 aa15.75■□□□□ 0.11
VPS13B-201ENST00000355155 SMOC1Q9H4F8 434 aa15.75■□□□□ 0.11
VPS13B-201ENST00000355155 MCCC2Q9HCC0 563 aa15.75■□□□□ 0.11
VPS13B-201ENST00000355155 ATP13A2Q9NQ11 1180 aa15.75■□□□□ 0.11
VPS13B-201ENST00000355155 CMC2Q9NRP2 79 aa15.75■□□□□ 0.11
VPS13B-201ENST00000355155 SELENONQ9NZV5 590 aa15.75■□□□□ 0.11
VPS13B-201ENST00000355155 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.75■□□□□ 0.11
VPS13B-201ENST00000355155 PCDHGA1Q9Y5H4 931 aa15.75■□□□□ 0.11
VPS13B-201ENST00000355155 CABIN1Q9Y6J0 2220 aa15.74■□□□□ 0.11
VPS13B-201ENST00000355155 J3QRE1 110 aa15.74■□□□□ 0.11
VPS13B-201ENST00000355155 CDC40O60508 579 aaKnown RBP eCLIP15.74■□□□□ 0.11
VPS13B-201ENST00000355155 RAB40ALP0C0E4 278 aa15.74■□□□□ 0.11
VPS13B-201ENST00000355155 CCNA2P20248 432 aa15.74■□□□□ 0.11
VPS13B-201ENST00000355155 MST1P26927 711 aa15.74■□□□□ 0.11
VPS13B-201ENST00000355155 PCOLCEQ15113 449 aa15.74■□□□□ 0.11
VPS13B-201ENST00000355155 NANOGP1Q8N7R0 232 aa15.74■□□□□ 0.11
VPS13B-201ENST00000355155 ANKK1Q8NFD2 765 aa15.74■□□□□ 0.11
VPS13B-201ENST00000355155 PROKR2Q8NFJ6 384 aa15.74■□□□□ 0.11
VPS13B-201ENST00000355155 OR52L1Q8NGH7 329 aa15.74■□□□□ 0.11
VPS13B-201ENST00000355155 OR6S1Q8NH40 331 aa15.74■□□□□ 0.11
VPS13B-201ENST00000355155 RHBDD1Q8TEB9 315 aa15.74■□□□□ 0.11
VPS13B-201ENST00000355155 DACH2Q96NX9 599 aa15.74■□□□□ 0.11
VPS13B-201ENST00000355155 ADOQ96SZ5 270 aa15.74■□□□□ 0.11
VPS13B-201ENST00000355155 TAPBPLQ9BX59 468 aa15.74■□□□□ 0.11
VPS13B-201ENST00000355155 DNAJC27Q9NZQ0 273 aa15.74■□□□□ 0.11
VPS13B-201ENST00000355155 NOL3O60936 208 aaKnown RBP15.74■□□□□ 0.11
VPS13B-201ENST00000355155 REM1O75628 298 aa15.74■□□□□ 0.11
VPS13B-201ENST00000355155 OR7A10O76100 309 aa15.74■□□□□ 0.11
VPS13B-201ENST00000355155 HTR1FP30939 366 aa15.74■□□□□ 0.11
VPS13B-201ENST00000355155 SLC1A3P43003 542 aa15.74■□□□□ 0.11
VPS13B-201ENST00000355155 RFX3P48380 749 aa15.74■□□□□ 0.11
VPS13B-201ENST00000355155 NRG3P56975 720 aa15.74■□□□□ 0.11
VPS13B-201ENST00000355155 COPZ1P61923 177 aa15.74■□□□□ 0.11
VPS13B-201ENST00000355155 NFATC3Q12968 1075 aa15.74■□□□□ 0.11
VPS13B-201ENST00000355155 GID4Q8IVV7 300 aa15.74■□□□□ 0.11
VPS13B-201ENST00000355155 NAXDQ8IW45 347 aa15.74■□□□□ 0.11
VPS13B-201ENST00000355155 ZNF614Q8N883 585 aa15.74■□□□□ 0.11
VPS13B-201ENST00000355155 OR52I1Q8NGK6 324 aa15.74■□□□□ 0.11
VPS13B-201ENST00000355155 OR5W2Q8NH69 310 aa15.74■□□□□ 0.11
VPS13B-201ENST00000355155 SGTBQ96EQ0 304 aa15.74■□□□□ 0.11
VPS13B-201ENST00000355155 TIMMDC1Q9NPL8 285 aa15.74■□□□□ 0.11
VPS13B-201ENST00000355155 NPFFR2Q9Y5X5 522 aa15.74■□□□□ 0.11
VPS13B-201ENST00000355155 SLC22A1O15245 554 aa15.73■□□□□ 0.11
VPS13B-201ENST00000355155 DLGAP3O95886 979 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms